miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48780_mtr-miR2199:pmrd
Length = 297
Score = 321 bits (162), Expect = 3e-88
Identities = 162/162 (100%)
Strand = Plus / Plus
Query: 3 atgtgctgtgcaattgtgatccgttctagtgtatcatacaattcacagcttaatattgat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtgctgtgcaattgtgatccgttctagtgtatcatacaattcacagcttaatattgat 60
Query: 63 taattccagtttattaatttggaatatatatcttttgatagaggcctaggtcactaattt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taattccagtttattaatttggaatatatatcttttgatagaggcctaggtcactaattt 120
Query: 123 tcttgttttaatatatttaagaaaatatcatatgatatcttc 164
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcttgttttaatatatttaagaaaatatcatatgatatcttc 162
Score = 268 bits (135), Expect = 4e-72
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 344 tacatatatcaagattaaccgtatagtttaatggcctttatatgaaaatttttatgttct 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 tacatatatcaagattaaccgtatagtttaatggcctttatatgaaaatttttatgttct 222
Query: 404 taaactaaactggaaatatttgagagctgggatatttttgatacactagcacggatcacc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 taaactaaactggaaatatttgagagctgggatatttttgatacactagcacggatcacc 282
Query: 464 gttgtgggtcacgta 478
|||||||||||||||
Sbjct: 283 gttgtgggtcacgta 297
>48681_lja-miR2199:pmrd
Length = 153
Score = 48.1 bits (24), Expect = 7e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 442 tgatacactagcacggatcaccgttgtgggtcacgt 477
|||||||||||||||| |||||||||| |||||||
Sbjct: 118 tgatacactagcacgggtcaccgttgtaagtcacgt 153
Score = 44.1 bits (22), Expect = 1e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 caattgtgatccgttctagtgtatca 38
||||||||| ||||||||||||||||
Sbjct: 11 caattgtgacccgttctagtgtatca 36
