miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40823_mtr-MIR2593c:mirbase
Length = 116
Score = 190 bits (96), Expect = 2e-49
Identities = 112/116 (96%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttatta 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattg 60
Query: 61 tagaccacatacatcattaaatgaatgaacctagaatatag-ttttttgcttatat 115
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 61 tagaccacatacatcattaaatgaatgaacctagaatgtagtttttttgcttatat 116
Score = 61.9 bits (31), Expect = 9e-11
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 16 tacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatc 75
|||||| ||| |||||||||||||||||| | |||||| | || |||||| | ||||
Sbjct: 100 tacattctaggttcattcatttaatgatgtatgtggtctacaataaagaccatgtgcatc 41
Query: 76 attaaatgaatgaacctagaatatagttttttgcttata 114
|||||||||||||| ||| ||| || ||||||||||||
Sbjct: 40 attaaatgaatgaatctaaaatgtaaatttttgcttata 2
>40821_mtr-MIR2593a:mirbase
Length = 116
Score = 190 bits (96), Expect = 2e-49
Identities = 112/116 (96%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 1 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttatta 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattg 60
Query: 61 tagaccacatacatcattaaatgaatgaacctagaatatag-ttttttgcttatat 115
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 61 tagaccacatacatcattaaatgaatgaacctagaatgtagtttttttgcttatat 116
Score = 61.9 bits (31), Expect = 9e-11
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 16 tacattttagattcattcatttaatgatgcacatggtctttattatagaccacatacatc 75
|||||| ||| |||||||||||||||||| | |||||| | || |||||| | ||||
Sbjct: 100 tacattctaggttcattcatttaatgatgtatgtggtctacaataaagaccatgtgcatc 41
Query: 76 attaaatgaatgaacctagaatatagttttttgcttata 114
|||||||||||||| ||| ||| || ||||||||||||
Sbjct: 40 attaaatgaatgaatctaaaatgtaaatttttgcttata 2
