miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40821_mtr-MIR2593a:mirbase
Length = 116
Score = 200 bits (101), Expect = 2e-52
Identities = 101/101 (100%)
Strand = Plus / Plus
Query: 1 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattg 60
Query: 61 tagaccacatacatcattaaatgaatgaacctagaatgtag 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaccacatacatcattaaatgaatgaacctagaatgtag 101
Score = 50.1 bits (25), Expect = 4e-07
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 16 tacattttagattcattcatttaatgatgcacatggtctttattgtagaccacatacatc 75
|||||| ||| |||||||||||||||||| | |||||| | | |||||| | ||||
Sbjct: 100 tacattctaggttcattcatttaatgatgtatgtggtctacaataaagaccatgtgcatc 41
Query: 76 attaaatgaatgaacctagaatgta 100
|||||||||||||| ||| ||||||
Sbjct: 40 attaaatgaatgaatctaaaatgta 16
>40822_mtr-MIR2593b:mirbase
Length = 115
Score = 176 bits (89), Expect = 2e-45
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 1 ttataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattg 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagcaaaagtttacattttagattcattcatttaatgatgcacatggtctttatta 60
Query: 61 tagaccacatacatcattaaatgaatgaacctagaat 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaccacatacatcattaaatgaatgaacctagaat 97
Score = 61.9 bits (31), Expect = 1e-10
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 2 tataagcaaaaatttacattttagattcattcatttaatgatgcacatggtctttattgt 61
|||||||||||| || ||| ||| |||||||||||||||||| | |||||| || |
Sbjct: 114 tataagcaaaaaactatattctaggttcattcatttaatgatgtatgtggtctataataa 55
Query: 62 agaccacatacatcattaaatgaatgaacctagaatgta 100
|||||| | |||||||||||||||||| ||| ||||||
Sbjct: 54 agaccatgtgcatcattaaatgaatgaatctaaaatgta 16
