miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40798_mtr-MIR2590d:mirbase
Length = 204
Score = 107 bits (54), Expect = 6e-24
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 281 tttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 62
Score = 107 bits (54), Expect = 6e-24
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 2 gactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaa 55
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaa 9
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 162 aaatctaaaggtgattattgtgccatgtcattcttgaa 199
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 282 ttcaagaatgacatggcagaataatcacccttagattt 319
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 199 ttcaagaatgacatggcacaataatcacctttagattt 162
>40799_mtr-MIR2590e:mirbase
Length = 209
Score = 103 bits (52), Expect = 9e-23
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 285 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcct 336
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtcct 64
Score = 101 bits (51), Expect = 3e-22
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 1 ggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ggactatttcttgataaaatctaagggtgattattctgccatgtcattctt 13
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 167 aaatctaaaggtgattattgtgccatgtcattcttgaa 204
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 282 ttcaagaatgacatggcagaataatcacccttagattt 319
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 204 ttcaagaatgacatggcacaataatcacctttagattt 167
>40800_mtr-MIR2590f:mirbase
Length = 197
Score = 99.6 bits (50), Expect = 1e-21
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 285 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 334
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 58
Score = 99.6 bits (50), Expect = 1e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 2 gactatttcttgataaaatctaagggtgattattctgccatgtcattctt 51
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gactatttcttgataaaatctaagggtgattattctgccatgtcattctt 9
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 155 aaatctaaaggtgattattgtgccatgtcattcttgaa 192
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 282 ttcaagaatgacatggcagaataatcacccttagattt 319
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 192 ttcaagaatgacatggcacaataatcacctttagattt 155
>40795_mtr-MIR2590a:mirbase
Length = 197
Score = 99.6 bits (50), Expect = 1e-21
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 285 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 334
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 58
Score = 99.6 bits (50), Expect = 1e-21
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 2 gactatttcttgataaaatctaagggtgattattctgccatgtcattctt 51
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gactatttcttgataaaatctaagggtgattattctgccatgtcattctt 9
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 155 aaatctaaaggtgattattgtgccatgtcattcttgaa 192
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 282 ttcaagaatgacatggcagaataatcacccttagattt 319
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 192 ttcaagaatgacatggcacaataatcacctttagattt 155
>40796_mtr-MIR2590b:mirbase
Length = 203
Score = 93.7 bits (47), Expect = 8e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 281 tttcaagaatgacatggcagaataatcacccttagattttatcaagaaata 331
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 7 tttcaagaatgacatggcagaataatcacccttaaattttatcaagaaata 57
Score = 93.7 bits (47), Expect = 8e-20
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 5 tatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaa 55
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 57 tatttcttgataaaatttaagggtgattattctgccatgtcattcttgaaa 7
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
|||||||| |||||||||| ||||||||||||||||||
Sbjct: 161 aaatctaaaggtgattattgtgccatgtcattcttgaa 198
Score = 60.0 bits (30), Expect = 1e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 282 ttcaagaatgacatggcagaataatcacccttagattt 319
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 198 ttcaagaatgacatggcacaataatcacctttagattt 161
>40797_mtr-MIR2590c:mirbase
Length = 202
Score = 83.8 bits (42), Expect = 8e-17
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 285 aagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 334
|||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 9 aagaatgacatggcagaataatcacccttaaattttatcaataaatagtc 58
Score = 83.8 bits (42), Expect = 8e-17
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 2 gactatttcttgataaaatctaagggtgattattctgccatgtcattctt 51
|||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 58 gactatttattgataaaatttaagggtgattattctgccatgtcattctt 9
Score = 52.0 bits (26), Expect = 3e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
|||||||| |||||||||| |||||| |||||||||||
Sbjct: 160 aaatctaaaggtgattattgtgccatttcattcttgaa 197
Score = 52.0 bits (26), Expect = 3e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 282 ttcaagaatgacatggcagaataatcacccttagattt 319
||||||||||| |||||| |||||||||| ||||||||
Sbjct: 197 ttcaagaatgaaatggcacaataatcacctttagattt 160
