miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40850_mtr-MIR2612b:mirbase
          Length = 132

 Score =  262 bits (132), Expect = 6e-71
 Identities = 132/132 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataagctctatcatgtatttgatagtgtcaactagtacagaaaacctatctatctagcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ataagctctatcatgtatttgatagtgtcaactagtacagaaaacctatctatctagcta 60

                                                                       
Query: 61  cacaatcaaaatatgttagatagataagttttatgtagtagttgacattatcaaatacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cacaatcaaaatatgttagatagataagttttatgtagtagttgacattatcaaatacat 120

                       
Query: 121 gaaagaacttga 132
           ||||||||||||
Sbjct: 121 gaaagaacttga 132



 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 77  tagatagataagttttatgtagtagttgacattatcaaatacatga 122
           |||||||||| ||||| |||| ||||||||| ||||||||||||||
Sbjct: 56  tagatagataggttttctgtactagttgacactatcaaatacatga 11



 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 11  tcatgtatttgatagtgtcaactagtacagaaaacctatctatcta 56
           |||||||||||||| ||||||||| |||| ||||| ||||||||||
Sbjct: 122 tcatgtatttgataatgtcaactactacataaaacttatctatcta 77