miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40854_mtr-MIR2615b:mirbase
Length = 258
Score = 204 bits (103), Expect = 2e-53
Identities = 119/127 (93%)
Strand = Plus / Plus
Query: 116 acgttaaatcaacgttcgcgtttcacgacgtttaaaaacgtctcactttcatttttacga 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 acgttaaatcaacgttcgcgtttcacgacgtttaaaaacgtctcactttcatttttacga 175
Query: 176 cgcatagnnnnnnnnatcgtaacgatcacgtcaaaaaagagaaggcctgatcgcatttta 235
||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 cgcatagttttttttatcgtaacgatcacgtcaaaaaagagaaggcctgatcgcatttta 235
Query: 236 aaaggcg 242
|||||||
Sbjct: 236 aaaggcg 242
Score = 85.7 bits (43), Expect = 2e-17
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 2 gtttaaaacctcttgtccgtattttaaaattgttcacgttccc 44
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttaaaacctcttgtccgtattttaaaattgttcacgttccc 43
>40855_mtr-MIR2615c:mirbase
Length = 215
Score = 89.7 bits (45), Expect = 1e-18
Identities = 52/53 (98%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 191 atcgtaacgatcacgtcaaaa-aagagaaggcctgatcgcattttaaaaggcg 242
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 162 atcgtaacgatcacgtcaaaaaaagagaaggcctgatcgcattttaaaaggcg 214
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 ccgtattttaaaattgttcacgttccc 44
|||||||||||||| ||||||||||||
Sbjct: 1 ccgtattttaaaatggttcacgttccc 27
