miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40859_mtr-MIR2617c:mirbase
Length = 118
Score = 111 bits (56), Expect = 8e-26
Identities = 79/83 (95%), Gaps = 4/83 (4%)
Strand = Plus / Plus
Query: 1 atgtagtgtagcatgcccgtttggtgaattactctgatgaatattttatatttaattac- 59
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 20 atgtagtgtagcatgcccgtttg-tgaattact--gatgaatattttatatttaattact 76
Query: 60 tttgggtaacggggtgttacatt 82
|||||||||||||||||||||||
Sbjct: 77 tttgggtaacggggtgttacatt 99
>40857_mtr-MIR2617a:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 49 tatttaattacttt-gggtaacggggtgttaca 80
|||||||||||||| ||||||||||||||||||
Sbjct: 52 tatttaattacttttgggtaacggggtgttaca 84
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 atgtagtgtagcatgcccgtttgg 24
||||||||||||||||||||||||
Sbjct: 1 atgtagtgtagcatgcccgtttgg 24
