miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40875_mtr-MIR2629c:mirbase
Length = 61
Score = 65.9 bits (33), Expect = 6e-12
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 20 aagttttcctcggtagttaactgcagtcagttccaataaaattcgacagttagctgccga 79
|||||||||||||||||||||||||||| ||||| | |||||| |||||| |||||||
Sbjct: 1 aagttttcctcggtagttaactgcagtcggttcc---ataattcggcagttaactgccga 57
Query: 80 ggg 82
|||
Sbjct: 58 ggg 60
>40874_mtr-MIR2629b:mirbase
Length = 61
Score = 65.9 bits (33), Expect = 6e-12
Identities = 56/63 (88%), Gaps = 3/63 (4%)
Strand = Plus / Plus
Query: 20 aagttttcctcggtagttaactgcagtcagttccaataaaattcgacagttagctgccga 79
|||||||||||||||||||||||||||| ||||| | |||||| |||||| |||||||
Sbjct: 1 aagttttcctcggtagttaactgcagtcggttcc---ataattcggcagttaactgccga 57
Query: 80 ggg 82
|||
Sbjct: 58 ggg 60
>40878_mtr-MIR2629f:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 8 agttaattgcggaagttttcctcggtagttaactgc 43
|||||| ||| |||||||||||||||||||||||||
Sbjct: 41 agttaactgccgaagttttcctcggtagttaactgc 76
>40879_mtr-MIR2629g:mirbase
Length = 274
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 gaagttttcctcggtagttaactgca 44
||||||||||||||||||||||||||
Sbjct: 234 gaagttttcctcggtagttaactgca 259
>40873_mtr-MIR2629a:mirbase
Length = 59
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 agttttcctcggtagttaactgcag 45
|||||||||||||||||||||||||
Sbjct: 2 agttttcctcggtagttaactgcag 26
>40876_mtr-MIR2629d:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gaagttttcctcggtagttaact 41
|||||||||||||||||||||||
Sbjct: 18 gaagttttcctcggtagttaact 40
