miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>46325_miR394:micropc
          Length = 97

 Score =  192 bits (97), Expect = 6e-50
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 35  ttggcattctgtccacctccattgatgtacttcttcttacctacccaacttataaaatga 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttggcattctgtccacctccattgatgtacttcttcttacctacccaacttataaaatga 60

                                                
Query: 95  tttgtctttgaagtaatggaggcggccagtatgtcaa 131
           |||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttgtctttgaagtaatggaggcggccagtatgtcaa 97




>46705_miR394:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 36 tggcattctgtccacctccat 56
          |||||||||||||||||||||
Sbjct: 1  tggcattctgtccacctccat 21




>45941_miR394:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 35 ttggcattctgtccacctcca 55
          |||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcca 21




>45351_miR394:micropc
          Length = 79

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 35 ttggcattctgtccacctcca 55
          |||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcca 21




>44836_miR394:micropc
          Length = 81

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 35 ttggcattctgtccacctcca 55
          |||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcca 21




>46238_miR394:micropc
          Length = 76

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 ttggcattctgtccacctcc 54
          ||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcc 20




>45291_miR394:micropc
          Length = 71

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 ttggcattctgtccacctcc 54
          ||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcc 20




>45025_miR394:micropc
          Length = 85

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 35 ttggcattctgtccacctcc 54
          ||||||||||||||||||||
Sbjct: 1  ttggcattctgtccacctcc 20