miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41060_ghr-MIR399a:mirbase
Length = 124
Score = 200 bits (101), Expect = 2e-52
Identities = 121/128 (94%), Gaps = 6/128 (4%)
Strand = Plus / Plus
Query: 1 tgagatattacagggcaaaatcttcagtggcaggcagccattgtatatggctccgttcat 60
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 1 tgagatattacagggcaaaatcttcagtggcaggcag------tatatggctccattcat 54
Query: 61 caggcatcagctgtatggaaaattgcagtgtgttctccgccaatggagatttgtccggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 caggcatcagctgtatggaaaattgcagtgtgttctccgccaatggagatttgtccggta 114
Query: 121 attccggt 128
||||||||
Sbjct: 115 attccggt 122
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 44.1 bits (22), Expect = 2e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 7 attacagggcaaaatcttcagtggcaggcagcca 40
||||||||||||| |||||| |||||||||||||
Sbjct: 17 attacagggcaaa-tcttcactggcaggcagcca 49
