miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45825_miR818:micropc
          Length = 130

 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 20  cgtcccataatataagggattttgagtttttacttgcaacatttgaccactc 71
           ||||||||||||||||||||||| |||||||  ||| ||| |||||||||||
Sbjct: 130 cgtcccataatataagggattttaagtttttgtttgtaacgtttgaccactc 79



 Score = 50.1 bits (25), Expect = 8e-07
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                               
Query: 20 cgtcccataatataagggattttgagtttttacttgcaacatttgaccactcg 72
          ||||||| ||||||||| ||||||| |||||  ||| ||| ||||||||||||
Sbjct: 1  cgtcccacaatataaggaattttgattttttgtttgtaacgtttgaccactcg 53




>46744_miR1436:micropc
          Length = 83

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 83 actccctccgtcccataatataag 60



 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||| ||||||||||||
Sbjct: 1  actccctccgttccataatataag 24




>46683_miR1436:micropc
          Length = 60

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37




>46560_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>46416_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>46351_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>46296_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>46229_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>46082_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45853_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45812_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45616_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45608_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45459_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45450_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45382_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>45149_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>44955_miR1436:micropc
          Length = 80

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 12 actccctccgtcccataatataag 35
          ||||||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataag 57




>46836_miR1439:micropc
          Length = 86

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 11 tactccctccgtcccataatataag 35
          |||||||||||||||| ||||||||
Sbjct: 85 tactccctccgtcccaaaatataag 61




>46419_miR818:micropc
          Length = 132

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 19  ccgtcccataatataagggattttg 43
           |||||||| ||||||||||||||||
Sbjct: 132 ccgtcccaaaatataagggattttg 108