miRNEST 2.0, an integrative microRNA resource :: BLAST
>49071_osa-miR818e:pmrd
Length = 225
Score = 71.9 bits (36), Expect = 2e-13
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 19 ccgtcccataatataagggattttgagtttttacttgcaacatttgaccactcgtc 74
|||||| ||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 3 ccgtcctataatataagggattttgagtttttgcttgcactgtttgaccactcgtc 58
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 16 cctccgtcccataatataagggattttgagttttt 50
||||||||||||||||||||||||||| |||||||
Sbjct: 225 cctccgtcccataatataagggattttaagttttt 191
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggattttg 43
|||||||||||||||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataatataagggattttg 41
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttg 43
||||||||| ||||||||||||||||||||||
Sbjct: 94 tactccctctctcccataatataagggattttg 62
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 202 aaattccttatattataggacggaggga 229
|||| ||||||||||| |||||||||||
Sbjct: 39 aaatcccttatattatgggacggaggga 12
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggattttg 43
|||||||||||||||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataatataagggattttg 41
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttg 43
||||||||| ||||||||||||||||||||||
Sbjct: 94 tactccctctctcccataatataagggattttg 62
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 202 aaattccttatattataggacggaggga 229
|||| ||||||||||| |||||||||||
Sbjct: 39 aaatcccttatattatgggacggaggga 12
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttg 43
|||||||||||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataagggattttg 81
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 8 aactactccctccgtcccataatataag 35
||||||||||||||||||||||||||||
Sbjct: 7 aactactccctccgtcccataatataag 34
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 202 aaattccttatattataggacggaggga 229
||||| |||||||||| |||||||||||
Sbjct: 40 aaattacttatattatgggacggaggga 13
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 202 aaattccttatattataggacggaggga 229
|||| ||||||||||| |||||||||||
Sbjct: 83 aaatcccttatattatgggacggaggga 110
>49070_osa-miR818d:pmrd
Length = 139
Score = 63.9 bits (32), Expect = 5e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggatttt 42
||||||||||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataagggatttt 96
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggatttt 42
||||| |||| |||||||||||||||||||||
Sbjct: 15 tactctctccatcccataatataagggatttt 46
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 202 aaattccttatattataggacggaggga 229
|||| ||||||||||| |||||||||||
Sbjct: 97 aaatcccttatattatgggacggaggga 124
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 60.0 bits (30), Expect = 8e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccataatataagggattttg 43
|||||||||||||||||||||||||||| |||||
Sbjct: 122 ctactccctccgtcccataatataagggtttttg 89
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggat 39
|||||||||||||||||||||||||||||
Sbjct: 7 tactccctccgtcccataatataagggat 35
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 207 ccttatattataggacggagggattagatt 236
||||||||||| ||||||||||| ||||||
Sbjct: 96 ccttatattatgggacggagggagtagatt 125
>50274_osa-miRf11059-akr:pmrd
Length = 172
Score = 60.0 bits (30), Expect = 8e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttga 44
||||||||||||||||| ||||||||||||||||
Sbjct: 34 tactccctccgtcccatgatataagggattttga 1
>49067_osa-miR818a:pmrd
Length = 144
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 18 tccgtcccataatataagggattttgagt 46
|||||||||||||||||||||||||||||
Sbjct: 139 tccgtcccataatataagggattttgagt 111
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 14 tccctccgtcccataatataagggattt 41
||||||| ||||||| ||||||||||||
Sbjct: 1 tccctccatcccatagtataagggattt 28
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 56.0 bits (28), Expect = 1e-08
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttgagttttt 50
|||||||||||||||||||||||| ||||||| |||||||
Sbjct: 97 tactccctccgtcccataatataa-ggattttaagttttt 59
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 195 aaaactcaaattccttatattataggacggaggga 229
|||||| ||| |||||||||||| |||||||||||
Sbjct: 60 aaaacttaaaatccttatattatgggacggaggga 94
>49068_osa-miR818b:pmrd
Length = 113
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 16 cctccgtcccataatataagggattttg 43
||||||||||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataagggattttg 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 cctccgtcccataatataagggatttt 42
|||||||||||||||||||| ||||||
Sbjct: 1 cctccgtcccataatataagagatttt 27
>51023_osa-miRf11808-akr:pmrd
Length = 117
Score = 54.0 bits (27), Expect = 5e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 8 aactactccctccgtcccataatataagggatttt 42
|||||||||||||||||| |||||||||||||||
Sbjct: 116 aactactccctccgtccctaaatataagggatttt 82
>50275_osa-miRf11060-akr:pmrd
Length = 166
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattt 41
||||||||||||||||| |||||||||||||
Sbjct: 31 tactccctccgtcccatgatataagggattt 1
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 54.0 bits (27), Expect = 5e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 tccgtcccataatataagggattttga 44
|||||||||||||||||||||||||||
Sbjct: 71 tccgtcccataatataagggattttga 97
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttga 44
||||||||||||||| ||||| ||||||||||||
Sbjct: 34 tactccctccgtcccctaatacaagggattttga 1
>49126_osa-miR1442:pmrd
Length = 185
Score = 54.0 bits (27), Expect = 5e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccataatataagggat 39
|||||||| ||||||||||||||||||||||
Sbjct: 115 actactccatccgtcccataatataagggat 145
>49069_osa-miR818c:pmrd
Length = 176
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 tccgtcccataatataagggattttg 43
||||||||||||||||||||||||||
Sbjct: 164 tccgtcccataatataagggattttg 139
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 cgtcccataatataagggattttga 44
||||| |||||||||||||||||||
Sbjct: 16 cgtcctataatataagggattttga 40
>54695_tae-miR1120:pmrd
Length = 119
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataag 35
|||||||||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataag 42
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataag 35
||||||||||||| |||||||||||
Sbjct: 99 tactccctccgtctcataatataag 75
>50305_osa-miRf11090-akr:pmrd
Length = 116
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttg 43
||||||||| |||||| ||||||||||||||||
Sbjct: 108 tactccctctgtcccaaaatataagggattttg 76
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggattttg 43
||||||||||||||| ||||||||||||||||
Sbjct: 2 tactccctccgtccctaaatataagggattttg 34
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttg 43
||||||||||||||| ||||||||||||||||
Sbjct: 96 tactccctccgtcccgaaatataagggattttg 64
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggatt 40
|||||||||||||||| ||||||| |||||
Sbjct: 10 tactccctccgtcccaaaatataaaggatt 39
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataagggattttg 43
||||||||||||||| ||||||||||||||||
Sbjct: 96 tactccctccgtcccgaaatataagggattttg 64
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataatataagggatt 40
|||||||||||||||| ||||||| |||||
Sbjct: 10 tactccctccgtcccaaaatataaaggatt 39
>51209_osa-miRf11994-akr:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 40 tttgagtttttacttgcaacatttgaccact 70
||||||||||| |||||||| ||||||||||
Sbjct: 1 tttgagtttttgcttgcaacgtttgaccact 31
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 40 tttgagtttttacttgcaacatttgaccactcgtc 74
||||||||||| ||||||| ||||||||||||||
Sbjct: 183 tttgagtttttgcttgcaatgtttgaccactcgtc 149
>50920_osa-miRf11705-akr:pmrd
Length = 134
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 8 aactactccctccgtcccataatataa 34
||||||||||||||||||| |||||||
Sbjct: 125 aactactccctccgtcccaaaatataa 99
>49120_osa-miR1436:pmrd
Length = 161
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ctactccctccgtcccataatat 32
|||||||||||||||||||||||
Sbjct: 11 ctactccctccgtcccataatat 33
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccataat 30
||||||||||||||||||||||
Sbjct: 144 actactccctccgtcccataat 123
>49958_osa-miRf10743-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 9 actactccctccgtcccataatata 33
|||||||||||||||||| ||||||
Sbjct: 112 actactccctccgtcccaaaatata 88
>49957_osa-miRf10742-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 actactccctccgtcccataatata 33
|||||||||||||||||| ||||||
Sbjct: 15 actactccctccgtcccaaaatata 39
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccataatataag 35
|||||||||||||||| ||||||||
Sbjct: 92 tactccctccgtcccaaaatataag 68
>49787_osa-miRf10572-akr:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccataat 30
|||||||||||||||||||||
Sbjct: 102 ctactccctccgtcccataat 82
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataat 30
||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataat 28
>49786_osa-miRf10571-akr:pmrd
Length = 109
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 ctactccctccgtcccataat 30
|||||||||||||||||||||
Sbjct: 102 ctactccctccgtcccataat 82
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccataat 30
||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataat 28
