miRNEST 2.0, an integrative microRNA resource :: BLAST
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 75 tttggatcatgctatccctttggattcctcctttgg 110
||||||||||||||||||||||||||||||||||||
Sbjct: 48 tttggatcatgctatccctttggattcctcctttgg 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 72 aattttggatcatgctatccctttggattcctcct 106
|||||||||||||||||||||||||||||||||||
Sbjct: 50 aattttggatcatgctatccctttggattcctcct 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 11 agaggaggcatccaaagggatcgcattgatcc 42
||||||||||||||||||||||||||||||||
Sbjct: 1 agaggaggcatccaaagggatcgcattgatcc 32
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 72 aattttggatcatgctatccctttggattcctcct 106
|||||||||||||||||||||||||||||||||||
Sbjct: 51 aattttggatcatgctatccctttggattcctcct 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 11 agaggaggcatccaaagggatcgcattgatcc 42
||||||||||||||||||||||||||||||||
Sbjct: 1 agaggaggcatccaaagggatcgcattgatcc 32
>40706_mtr-MIR393:mirbase
Length = 135
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcct 43
||||||||||||||||||||||||||||||||
Sbjct: 12 gaggaggcatccaaagggatcgcattgatcct 43
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 78 ggatcatgctatccctttggattcctccttt 108
||||||||| ||||||||||||| |||||||
Sbjct: 96 ggatcatgccatccctttggatttctccttt 126
>40470_gma-MIR393:mirbase
Length = 120
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||||||
Sbjct: 2 gaggaggcatccaaagggatcgcattgatcc 32
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 73 attttggatcatgctatccctttggattcctccttt 108
|||| ||||||||||||||||||||||| |||||||
Sbjct: 85 atttgggatcatgctatccctttggatttctccttt 120
>39866_aly-MIR393b:mirbase
Length = 169
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 8 actagaggaggcatccaaagggatcgcattgatcct 43
||||||| | ||||||||||||||||||||||||||
Sbjct: 5 actagagaaagcatccaaagggatcgcattgatcct 40
>39865_aly-MIR393a:mirbase
Length = 147
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 8 actagaggaggcatccaaagggatcgcattgatcct 43
||||||||| | ||||||||||||||||||||||||
Sbjct: 5 actagaggaaggatccaaagggatcgcattgatcct 40
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 74 ttttggatcatgctatccctttggattcctcctt 107
||||||||||||||||| |||||||||| |||||
Sbjct: 106 ttttggatcatgctatctctttggattcatcctt 139
>42566_sbi-MIR393:mirbase
Length = 139
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 12 gaggaggcatccaaagggatcgcattgatcc 42
||||| |||||||||||||||||||||||||
Sbjct: 11 gaggaagcatccaaagggatcgcattgatcc 41
>41997_osa-MIR393:mirbase
Length = 115
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 gcatccaaagggatcgcattgatcctt 44
|||||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcctt 34
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 18 gcatccaaagggatcgcattgatcctt 44
|||||||||||||||||||||||||||
Sbjct: 33 gcatccaaagggatcgcattgatcctt 59
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 aggcatccaaagggatcgcattgatcc 42
|||||||||||||||||||||||||||
Sbjct: 1 aggcatccaaagggatcgcattgatcc 27
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 attttggatcatgctatccctttggattc 101
|||| ||||||||||||||||||||||||
Sbjct: 89 atttgggatcatgctatccctttggattc 117
>40075_ath-MIR393a:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 74 ttttggatcatgctatccctttggattcctcctt 107
||||||||||||||||| |||||||||| |||||
Sbjct: 99 ttttggatcatgctatctctttggattcatcctt 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 11 agaggaggcatccaaagggatcgcattgatcct 43
|||||| | ||||||||||||||||||||||||
Sbjct: 1 agaggaaggatccaaagggatcgcattgatcct 33
>41238_csi-MIR393:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcct 43
||||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcct 43
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 83 atgctatccctttggattcctcctt 107
||||||||||| |||||||||||||
Sbjct: 86 atgctatccctctggattcctcctt 110
>40076_ath-MIR393b:mirbase
Length = 160
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 atccaaagggatcgcattgatcct 43
||||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcct 33
>40295_bna-MIR393:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcct 43
|||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcct 23
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>41999_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 8 actagaggaggcatccaaagggatcgcattgatc 41
||||| ||||| |||||||||||||||||||||
Sbjct: 14 actagtggaggactccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 8 actagaggaggcatccaaagggatcgcattgatc 41
||||| ||||| |||||||||||||||||||||
Sbjct: 14 actagtggaggactccaaagggatcgcattgatc 47
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatcc 42
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tccaaagggatcgcattgatc 41
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
