miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46869_aqc-miR166d:pmrd
Length = 129
Score = 256 bits (129), Expect = 3e-69
Identities = 129/129 (100%)
Strand = Plus / Plus
Query: 1 gagtggaatggagttggtgtgtgtggctagctacctgctggtagagatgttaggaggaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtggaatggagttggtgtgtgtggctagctacctgctggtagagatgttaggaggaat 60
Query: 61 gttgtttggctcgaagctttagaaccttttgtgttcaatgcatatcggaccaggcttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgtttggctcgaagctttagaaccttttgtgttcaatgcatatcggaccaggcttcat 120
Query: 121 tcctctcaa 129
|||||||||
Sbjct: 121 tcctctcaa 129
>54790_vvi-miR166b:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
|||||||||||||||||||||||||
Sbjct: 68 tcggaccaggcttcattcctctcaa 92
>46866_aqc-miR166a:pmrd
Length = 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattcctctca 109
>48672_ini-miR166:pmrd
Length = 169
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 atcggaccaggcttcattcctc 125
||||||||||||||||||||||
Sbjct: 148 atcggaccaggcttcattcctc 169
>54972_zma-miR166p:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 71 tcggaccaggcttcattcccctcaa 95
>54969_zma-miR166m:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 117 tcggaccaggcttcattcctc 137
>54968_zma-miR166l:pmrd
Length = 137
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 98 tcggaccaggcttcattcctc 118
>54795_vvi-miR166g:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>54794_vvi-miR166f:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 69 tcggaccaggcttcattcccctcaa 93
>54792_vvi-miR166d:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 129 tcggaccaggcttcattcccctcaa 153
>54543_sly-miR166a:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 86 tcggaccaggcttcattcccctcaa 110
>54426_sbi-miR166k:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 83 tcggaccaggcttcattcctc 103
>54421_sbi-miR166f:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcctc 120
>51636_ptc-miR166l:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 68 tcggaccaggcttcattcccctcaa 92
>51633_ptc-miR166i:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 74 tcggaccaggcttcattcccctcaa 98
>51630_ptc-miR166f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>51628_ptc-miR166d:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 76 tcggaccaggcttcattcccctcaa 100
>48851_osa-miR166h:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcctc 109
>48850_osa-miR166g:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 115 tcggaccaggcttcattcctc 135
>48849_osa-miR166f:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 72 tcggaccaggcttcattcccctcaa 96
>48847_osa-miR166d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 91 tcggaccaggcttcattcccctcaa 115
>48713_mtr-miR166c:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctc 125
|||||||||||||||||||||
Sbjct: 151 tcggaccaggcttcattcctc 171
>48344_bna-miR166c:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 93 tcggaccaggcttcattcccctcaa 117
>48343_bna-miR166b:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 91 tcggaccaggcttcattcccctcaa 115
>48342_bna-miR166a:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 ggaatgttgtttggctcgaag 76
|||||||||||||||||||||
Sbjct: 6 ggaatgttgtttggctcgaag 26
>46951_ath-miR166g:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 gaggaatgttgtttggctcga 74
|||||||||||||||||||||
Sbjct: 16 gaggaatgttgtttggctcga 36
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 85 tcggaccaggcttcattcccctcaa 109
>46950_ath-miR166f:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 78 tcggaccaggcttcattcccctcaa 102
>46949_ath-miR166e:pmrd
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 119 tcggaccaggcttcattcccctcaa 143
>46870_aqc-miR166e:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctcaa 129
||||||||||||||||||| |||||
Sbjct: 121 tcggaccaggcttcattcccctcaa 145
>54789_vvi-miR166a:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 100 tcggaccaggcttcattcct 119
>54578_smo-miR166c:pmrd
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 107 tcggaccaggcttcattcccctca 130
>54577_smo-miR166b:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 99 tcggaccaggcttcattcccctca 122
>54576_smo-miR166a:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 108 tcggaccaggcttcattcccctca 131
>54425_sbi-miR166j:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 85 tcggaccaggcttcattcccctca 108
>52336_ptc-miRf10514-akr:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 119 tcggaccaggcttcattcct 138
>51641_ptc-miR166q:pmrd
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 123 tcggaccaggcttcattcct 142
>51639_ptc-miR166o:pmrd
Length = 324
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 296 tcggaccaggcttcattcct 315
>51638_ptc-miR166n:pmrd
Length = 331
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 303 tcggaccaggcttcattcct 322
>51637_ptc-miR166m:pmrd
Length = 105
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 76 tcggaccaggcttcattcccctca 99
>51559_pta-miR166b:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 90 tcggaccaggcttcattcccctca 113
>51374_ppt-miR166g:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51373_ppt-miR166f:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51372_ppt-miR166e:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 96 tcggaccaggcttcattcccctca 119
>51369_ppt-miR166b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51368_ppt-miR166a:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 74 tcggaccaggcttcattcccctca 97
>51336_pga-miR166:pmrd
Length = 74
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 32 tcggaccaggcttcattcct 51
>48844_osa-miR166a:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 110 tcggaccaggcttcattcccctca 133
>48550_gma-miR166n:pmrd
Length = 409
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcctctca 128
||||||||||||||||||| ||||
Sbjct: 1 tcggaccaggcttcattcccctca 24
>46868_aqc-miR166c:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 105 tcggaccaggcttcattcct 124
||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattcct 108
