miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41160_tcc-MIR827:mirbase
Length = 148
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 63 agatgaccatcaacaaacatattca 87
|||||||||||||||||||||||||
Sbjct: 39 agatgaccatcaacaaacatattca 15
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttagatgaccatcaacaaaca 81
|||||||||||||||||||||
Sbjct: 108 ttagatgaccatcaacaaaca 128
>42835_zma-MIR827:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 atggttagatgaccatcaacaaacat 82
|||||||||||||||||| |||||||
Sbjct: 97 atggttagatgaccatcagcaaacat 122
>42482_ssp-MIR827:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 atggttagatgaccatcaacaaacat 82
|||||||||||||||||| |||||||
Sbjct: 102 atggttagatgaccatcagcaaacat 127
>41808_bdi-MIR827:mirbase
Length = 164
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 atggttagatgaccatcaacaaacat 82
|||||||||||||||||| |||||||
Sbjct: 109 atggttagatgaccatcagcaaacat 134
>41069_ghr-MIR827c:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttagatgaccatcaacaaaca 81
|||||||||||||||||||||
Sbjct: 118 ttagatgaccatcaacaaaca 138
>41068_ghr-MIR827b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttagatgaccatcaacaaaca 81
|||||||||||||||||||||
Sbjct: 136 ttagatgaccatcaacaaaca 156
>41067_ghr-MIR827a:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 61 ttagatgaccatcaacaaaca 81
|||||||||||||||||||||
Sbjct: 118 ttagatgaccatcaacaaaca 138
>42188_osa-MIR827b:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 tggttagatgaccatcaacaaaca 81
||||||||||||||||| ||||||
Sbjct: 105 tggttagatgaccatcagcaaaca 128
>42187_osa-MIR827a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 58 tggttagatgaccatcaacaaaca 81
||||||||||||||||| ||||||
Sbjct: 94 tggttagatgaccatcagcaaaca 117
>40145_ath-MIR827:mirbase
Length = 177
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 ttagatgaccatcaacaaac 80
||||||||||||||||||||
Sbjct: 106 ttagatgaccatcaacaaac 125
>39909_aly-MIR827:mirbase
Length = 197
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 ttagatgaccatcaacaaac 80
||||||||||||||||||||
Sbjct: 120 ttagatgaccatcaacaaac 139
