miRNEST 2.0, an integrative microRNA resource :: BLAST
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 355 bits (179), Expect = 7e-99
Identities = 182/183 (99%)
Strand = Plus / Plus
Query: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
Query: 61 taagctatggatccacagtcctatctatcaaccgaaggataggtttgcggcttgcatatc 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 taagctatggatccacagtcctatctatcaactgaaggataggtttgcggcttgcatatc 120
Query: 121 tcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaaaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaaaccca 180
Query: 181 taa 183
|||
Sbjct: 181 taa 183
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 133 bits (67), Expect = 5e-32
Identities = 156/182 (85%), Gaps = 4/182 (2%)
Strand = Plus / Plus
Query: 1 gattagggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgc 60
||||| |||||||||||||||||||||||||||| | || |||||||||||| ||||||
Sbjct: 1 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 60
Query: 61 taagctatggatcc-acagtcctatct--atcaaccgaag-gataggtttgcggcttgca 116
| ||||||| |||| |||| |||||| |||| | ||| || |||||||||||
Sbjct: 61 tgagctatgaatcccacagccctatcaccatcagtcattttgatgggcctgcggcttgca 120
Query: 117 tatctcaggagctttattgcctaatgttagatccctttttggattgaagggagctctaaa 176
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 tatctcaggagctttattacctaatgttagatctttttttggattgaagggagctctaaa 180
Query: 177 cc 178
||
Sbjct: 181 cc 182
>40338_rco-MIR159:mirbase
Length = 180
Score = 101 bits (51), Expect = 2e-22
Identities = 63/67 (94%)
Strand = Plus / Plus
Query: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
||||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |||||
Sbjct: 1 gagtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagcta 60
Query: 68 tggatcc 74
|||||||
Sbjct: 61 tggatcc 67
>40397_ahy-MIR159:mirbase
Length = 197
Score = 99.6 bits (50), Expect = 7e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
|||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 69 ggatcc 74
||||||
Sbjct: 61 ggatcc 66
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 145 agatccctttttggattgaagggagctcta 174
|||||| | |||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctcta 177
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 87.7 bits (44), Expect = 3e-18
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
|||||||||||||||||||||||||||||| |||| ||||||||||| ||||||| | |
Sbjct: 5 ggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactt 64
Query: 67 atggatcc 74
||||||||
Sbjct: 65 atggatcc 72
>41218_csi-MIR159:mirbase
Length = 216
Score = 83.8 bits (42), Expect = 4e-17
Identities = 77/86 (89%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 7 ggagtggagctccttgaagtccaatagaggttcttgc-tgggtagattaagctgctaagc 65
|||||||||||||||||||||||| ||||||||| || ||||| ||| ||||||| |||
Sbjct: 8 ggagtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagc 67
Query: 66 tatggat-ccacagtcctatctatca 90
||||||| |||||||||||| |||||
Sbjct: 68 tatggatcccacagtcctatgtatca 93
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 152 tttttggattgaagggagctcta 174
|||||||||||||||||||||||
Sbjct: 184 tttttggattgaagggagctcta 206
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
|||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 70 gatcc 74
|||||
Sbjct: 61 gatcc 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctcta 174
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
|||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 70 gatcc 74
|||||
Sbjct: 61 gatcc 65
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctcta 174
|||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctcta 173
>40432_gma-MIR159a:mirbase
Length = 214
Score = 75.8 bits (38), Expect = 1e-14
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
||||||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 69 ggatcc 74
||||||
Sbjct: 79 ggatcc 84
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctctaaaccc 179
||||||||||||||||||||| ||||
Sbjct: 175 tttggattgaagggagctctacaccc 200
>41528_sly-MIR159:mirbase
Length = 177
Score = 48.1 bits (24), Expect = 2e-06
Identities = 66/79 (83%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 98 gataggtttgcggcttgcatatctcaggagctttattg--cctaatgttagatccctttt 155
||||||||| || |||||||| |||||||||||||| || |||| |||| ||||
Sbjct: 99 gataggttttgggtttgcatatgtcaggagctttattttaccctttgtttgatcattttt 158
Query: 156 tggattgaagggagctcta 174
|||||||||||||||||||
Sbjct: 159 tggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tggagctccttgaagtccaa 30
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 109 ggcttgcatatctcaggagcttta 132
||||||||||||||||||||||||
Sbjct: 131 ggcttgcatatctcaggagcttta 154
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 54 aagctgctaagctatggatcc 74
|||||||||||||||||||||
Sbjct: 65 aagctgctaagctatggatcc 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctcta 174
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
>39805_aly-MIR159b:mirbase
Length = 202
Score = 46.1 bits (23), Expect = 9e-06
Identities = 54/63 (85%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaa-gctgctaagctatgga 71
|||||||||||||| |||| |||| | | || ||||| | ||| ||||||||||||||||
Sbjct: 17 gagctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatgga 76
Query: 72 tcc 74
|||
Sbjct: 77 tcc 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctct 173
||||||||||||||||||||
Sbjct: 169 tttggattgaagggagctct 188
>42635_tae-MIR159b:mirbase
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccctttttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 225 ccctctttggattgaagggagctct 249
>41917_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccctttttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 149 ccctttttggattgaagggagctct 173
|||| ||||||||||||||||||||
Sbjct: 237 ccctctttggattgaagggagctct 261
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 tttggattgaagggagctcta 174
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
