miRNEST 2.0, an integrative microRNA resource :: BLAST
>41310_ptc-MIR160f:mirbase
Length = 100
Score = 143 bits (72), Expect = 3e-35
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 1 aagaatggcctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaatggtctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60
Query: 61 acctttctatttggcatgaggggagtcgagcaggcc 96
|||| |||| |||||||||||||||| |||||||
Sbjct: 61 acctctctaactggcatgaggggagtcacgcaggcc 96
>41574_vvi-MIR160b:mirbase
Length = 104
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
|||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||
Sbjct: 10 ctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttccta 69
Query: 70 tttggcatgaggggagtcgagcaggc 95
|||||||||||||||||| |||||||
Sbjct: 70 tttggcatgaggggagtcaagcaggc 95
>40341_rco-MIR160c:mirbase
Length = 94
Score = 117 bits (59), Expect = 2e-27
Identities = 80/87 (91%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
|||||||||||||||||||||||||| ||||||||||||| ||||||||||| || |||
Sbjct: 5 ctgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttccta 64
Query: 70 tttggcatgaggggagtcgagcaggcc 96
|||||||||||||||||| |||||||
Sbjct: 65 tttggcatgaggggagtcatgcaggcc 91
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 99.6 bits (50), Expect = 4e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||
Sbjct: 20 ctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgccttctta 79
Query: 70 tttggcatgaggggagtc 87
||||||||||||||||
Sbjct: 80 catggcatgaggggagtc 97
>41165_aqc-MIR160a:mirbase
Length = 83
Score = 81.8 bits (41), Expect = 9e-17
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttctat 70
|||||||||||||| |||||||||| |||||||||| |||| ||||| || ||||||||
Sbjct: 1 tgcctggctccctggatgccatctaagaagcttgtc-aagaatgttgacaccctttctag 59
Query: 71 ttggcatgaggggagtc 87
||||||| |||||||||
Sbjct: 60 ttggcatcaggggagtc 76
>40660_mtr-MIR160c:mirbase
Length = 92
Score = 77.8 bits (39), Expect = 1e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttctat 70
|||||||||||||||||||||||| ||||||||||||| | ||||||||||||| ||
Sbjct: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa-acgattggcaacctttccat 64
Query: 71 ttggcatgaggggag 85
||||||||| |||||
Sbjct: 65 ttggcatgaagggag 79
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 69.9 bits (35), Expect = 3e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaa 48
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatctaagaagcttgtcaa 48
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 cctgcctggctccctgaatgccatct 34
||||||||||||||||||||||||||
Sbjct: 29 cctgcctggctccctgaatgccatct 54
>41928_osa-MIR160f:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>42501_sbi-MIR160f:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatc 33
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgaatgccatc 23
>40399_ahy-MIR160:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccat 32
|||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccat 42
>40398_ahy-MIR160:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccat 32
|||||||||||||||||||||||
Sbjct: 20 ctgcctggctccctgaatgccat 42
>39731_smo-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatct 34
||||||||||||||| |||||||||
Sbjct: 10 ctgcctggctccctgtatgccatct 34
>39461_ppt-MIR160g:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 9 cctgcctggctccctgaatgccatctaggaagcttgtcaaa 49
||||||||||||| || ||||||||| |||||||| ||||
Sbjct: 28 cctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
>39375_pab-MIR160b:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatct 34
||||||||||||||| |||||||||
Sbjct: 19 ctgcctggctccctgtatgccatct 43
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
