miRNEST 2.0, an integrative microRNA resource :: BLAST
>41309_ptc-MIR160e:mirbase
Length = 100
Score = 143 bits (72), Expect = 3e-35
Identities = 90/96 (93%)
Strand = Plus / Plus
Query: 1 aagaatggtctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagaatggcctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggca 60
Query: 61 acctctctaactggcatgaggggagtcacgcaggcc 96
|||| |||| |||||||||||||||| |||||||
Sbjct: 61 acctttctatttggcatgaggggagtcgagcaggcc 96
>41574_vvi-MIR160b:mirbase
Length = 104
Score = 109 bits (55), Expect = 4e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||
Sbjct: 9 tctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaaccttcct 68
Query: 69 aactggcatgaggggagtcacgcaggc 95
| ||||||||||||||||| ||||||
Sbjct: 69 atttggcatgaggggagtcaagcaggc 95
>40341_rco-MIR160c:mirbase
Length = 94
Score = 105 bits (53), Expect = 6e-24
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
||||||||||||||||||||||||||| ||||||||||||| ||||||||||| | ||
Sbjct: 4 tctgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttcct 63
Query: 69 aactggcatgaggggagtcacgcaggccc 97
| ||||||||||||||||| ||||||||
Sbjct: 64 atttggcatgaggggagtcatgcaggccc 92
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 103 bits (52), Expect = 2e-23
Identities = 81/88 (92%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 19 tctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgcct-tct 77
Query: 69 aac-tggcatgaggggagtcacgcaggc 95
|| ||||||||||||||||| ||||||
Sbjct: 78 tacatggcatgaggggagtcatgcaggc 105
>41165_aqc-MIR160a:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctctaa 70
|||||||||||||| |||||||||| |||||||||| |||| ||||| || ||| ||||
Sbjct: 1 tgcctggctccctggatgccatctaagaagcttgtc-aagaatgttgacaccctttctag 59
Query: 71 ctggcatgaggggagtcacgcag 93
|||||| |||||||||||||||
Sbjct: 60 ttggcatcaggggagtcacgcag 82
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 71.9 bits (36), Expect = 8e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatctaggaagcttgtcaa 48
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9 tctgcctggctccctgaatgccatctaagaagcttgtcaa 48
>40660_mtr-MIR160c:mirbase
Length = 92
Score = 61.9 bits (31), Expect = 8e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagcttgtcaaa 49
|||||||||||||||||||||||| |||||||||||||
Sbjct: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa 44
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatct 34
|||||||||||||||||||||||||
Sbjct: 30 ctgcctggctccctgaatgccatct 54
>40399_ahy-MIR160:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gtctgcctggctccctgaatgccat 32
|||||||||||||||||||||||||
Sbjct: 18 gtctgcctggctccctgaatgccat 42
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 tggcatgaggggagtcacgcaggc 95
|||||||| |||||||||||||||
Sbjct: 84 tggcatgaagggagtcacgcaggc 107
>40398_ahy-MIR160:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 8 gtctgcctggctccctgaatgccat 32
|||||||||||||||||||||||||
Sbjct: 18 gtctgcctggctccctgaatgccat 42
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 72 tggcatgaggggagtcacgcaggc 95
|||||||| |||||||||||||||
Sbjct: 84 tggcatgaagggagtcacgcaggc 107
>41928_osa-MIR160f:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatc 33
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>42501_sbi-MIR160f:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatc 33
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgaatgccatc 23
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatct 34
|||||||||||||||| |||||||||
Sbjct: 9 tctgcctggctccctgtatgccatct 34
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 9 tctgcctggctccctgaatgccatct 34
|||||||||||||||| |||||||||
Sbjct: 18 tctgcctggctccctgtatgccatct 43
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgaatgccatctaggaagct 42
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>39461_ppt-MIR160g:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 3e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaa 49
|||||||||||| || ||||||||| |||||||| ||||
Sbjct: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
