miRNEST 2.0, an integrative microRNA resource :: BLAST
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 170 bits (86), Expect = 1e-43
Identities = 100/107 (93%)
Strand = Plus / Plus
Query: 1 tgagaagacactggaggcagcggttcatcgatcttttcctgaagannnnnnngttttaca 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 tgagaagacactggaggcagcggttcatcgatcttttcctgaagatttttttgttttaca 60
Query: 61 cgaacaacacgaaccgatcgataaacctctgcatccagtgcttccct 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaacaacacgaaccgatcgataaacctctgcatccagtgcttccct 107
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 89.7 bits (45), Expect = 4e-19
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatcttttcctgaagannnnnnngttttacacga 63
||||||||||||||||||||||||||||||| |||||| | |||| |||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
Query: 64 acaacacgaaccgatcgataaacctctgcatccagtgcttcc 105
| |||| |||||||||||||||||||||||||||| ||||||
Sbjct: 64 aaaacatgaaccgatcgataaacctctgcatccagcgcttcc 105
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 5 aagacactggaggcagcggttcatcgatcttttcctga 42
|||||||||||||||||||||||||||||| |||||||
Sbjct: 18 aagacactggaggcagcggttcatcgatctcttcctga 55
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 91 cgatcgataaacctctgcatccag 114
>41090_tcc-MIR162:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 5 aagacactggaggcagcggttcatcgatcttttcctg 41
|||||||||||||||||||||||||||||| ||||||
Sbjct: 15 aagacactggaggcagcggttcatcgatctcttcctg 51
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 88 cgatcgataaacctctgcatccag 111
>40342_rco-MIR162:mirbase
Length = 101
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatcttttcctg 41
|||||||||||||||||||||||||| ||||||
Sbjct: 2 cactggaggcagcggttcatcgatctcttcctg 34
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccagtgctt 103
|||||||||||||||||||||||| ||||
Sbjct: 73 cgatcgataaacctctgcatccagcgctt 101
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatcttttcctg 41
|||||||||||||||||||||||||| ||||||
Sbjct: 11 cactggaggcagcggttcatcgatctcttcctg 43
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 66 aacacgaaccgatcgataaacctctgcatccag 98
|||| ||| ||||||||||||||||||||||||
Sbjct: 68 aacatgaatcgatcgataaacctctgcatccag 100
>41578_vvi-MIR162:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
|||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 2 gaagtcactggatgcagcggttcatcgatctcttcctgaa 41
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccag 98
|||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccag 93
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
|||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 3 gaagtcactggatgcagcggttcatcgatctcttcctgaa 42
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 70 cgatcgataaacctctgcatccag 93
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatcttttcctgaa 43
||||||| |||||||||||||||||| ||||||||
Sbjct: 19 cactggatgcagcggttcatcgatctgttcctgaa 53
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccag 98
|||||||||||||||||||||
Sbjct: 87 tcgataaacctctgcatccag 107
>40024_ath-MIR162a:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatcttttcctg 41
|||||||||||||||||||||||| ||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 76 gatcgataaacctctgcatccag 98
|||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatccag 109
>39812_aly-MIR162a:mirbase
Length = 228
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatcttttcctg 41
|||||||||||||||||||||||| ||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctg 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 76 gatcgataaacctctgcatccag 98
|||||||||||||||||||||||
Sbjct: 134 gatcgataaacctctgcatccag 156
>41220_csi-MIR162:mirbase
Length = 201
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 4 gaagacactggaggcagcggttcatcgatc 33
|||| |||||||||||||||||||||||||
Sbjct: 82 gaagtcactggaggcagcggttcatcgatc 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 158 cgatcgataaacctctgcatccag 181
>41929_osa-MIR162a:mirbase
Length = 171
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccagt 99
|||||||||||||||||||||||||
Sbjct: 140 cgatcgataaacctctgcatccagt 164
>39813_aly-MIR162b:mirbase
Length = 184
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccagtgctt 103
|||||||||||||||||||||||| ||||
Sbjct: 110 cgatcgataaacctctgcatccagcgctt 138
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 50 ctggaggcagcggttcatcgatc 72
>42502_sbi-MIR162:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 104 cgatcgataaacctctgcatccag 127
>40025_ath-MIR162b:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
||||||||||||||||||||||||
Sbjct: 76 cgatcgataaacctctgcatccag 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>41736_bdi-MIR162:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatcc 96
||||||||||||||||||||||
Sbjct: 108 cgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccag 98
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 78 tcgataaacctctgcatccag 98
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>41930_osa-MIR162b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 75 cgatcgataaacctctgcatccag 98
|||||||||| |||||||||||||
Sbjct: 101 cgatcgataagcctctgcatccag 124
