miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51639_ptc-miR166o:pmrd
Length = 324
Score = 642 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Plus
Query: 1 aaggggtgtttggaatgaagtttgatccaagatccttgtctctcccgttcatttagtaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggggtgtttggaatgaagtttgatccaagatccttgtctctcccgttcatttagtaat 60
Query: 61 gttactgctaggtttcgctatgtattgatcagtgtatacacagcagctacgagctaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttactgctaggtttcgctatgtattgatcagtgtatacacagcagctacgagctaggcc 120
Query: 121 ttgtgtttcagattttagcttcaatatagagtgagcactagtgatagagtttgattcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgtgtttcagattttagcttcaatatagagtgagcactagtgatagagtttgattcaag 180
Query: 181 atccatctcatgtgtgctagctagcttttaaatttttaatcagatccctacttcctgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atccatctcatgtgtgctagctagcttttaaatttttaatcagatccctacttcctgtta 240
Query: 241 attcttaggttttatcttgcaagttattatatttagtaaacatcatgaactgatctcgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attcttaggttttatcttgcaagttattatatttagtaaacatcatgaactgatctcgga 300
Query: 301 ccaggcttcattccttacaccgaa 324
||||||||||||||||||||||||
Sbjct: 301 ccaggcttcattccttacaccgaa 324
>51638_ptc-miR166n:pmrd
Length = 331
Score = 113 bits (57), Expect = 9e-26
Identities = 84/93 (90%)
Strand = Plus / Plus
Query: 229 tacttcctgttaattcttaggttttatcttgcaagttattatatttagtaaacatcatga 288
|||||| |||||||| |||||||| ||||||||||| ||||||||| | ||| ||||| |
Sbjct: 236 tacttcttgttaatttttaggtttgatcttgcaagtaattatatttggaaaatatcataa 295
Query: 289 actgatctcggaccaggcttcattccttacacc 321
| |||||||||||||||||||||||||||||||
Sbjct: 296 aatgatctcggaccaggcttcattccttacacc 328
Score = 97.6 bits (49), Expect = 5e-21
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 1 aaggggtgtttggaatgaagtttgatccaagatccttgtctctcccgtt 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggggtgtttggaatgaagtttgatccaagatccttgtctctcccgtt 49
>54789_vvi-miR166a:pmrd
Length = 130
Score = 60.0 bits (30), Expect = 1e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 4 gggtgtttggaatgaagtttgatccaagatcctt 37
||||||||||||||| ||||||||||||||||||
Sbjct: 3 gggtgtttggaatgaggtttgatccaagatcctt 36
Score = 54.0 bits (27), Expect = 7e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattccttacacc 321
||||||||||||||||||||||||| |||||
Sbjct: 95 tgatctcggaccaggcttcattcctgacacc 125
>46868_aqc-miR166c:pmrd
Length = 116
Score = 60.0 bits (30), Expect = 1e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattccttacacc 321
||||||||||||||||||||||||||||||
Sbjct: 85 gatctcggaccaggcttcattccttacacc 114
Score = 50.1 bits (25), Expect = 1e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 5 ggtgtttggaatgaagtttgatccaagatcctt 37
|||||||||||||| |||||| |||||||||||
Sbjct: 1 ggtgtttggaatgaggtttgagccaagatcctt 33
>48850_osa-miR166g:pmrd
Length = 145
Score = 54.0 bits (27), Expect = 7e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattccttacaccg 322
|||||||||||||||||||||||| ||||||
Sbjct: 111 gatctcggaccaggcttcattcctcacaccg 141
>48853_osa-miR166j:pmrd
Length = 140
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 ggtgtttggaatgaagtttgatccaagatc 34
||||||||||||| ||||||||||||||||
Sbjct: 6 ggtgtttggaatgcagtttgatccaagatc 35
Score = 44.1 bits (22), Expect = 7e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattccttacacc 321
||||||||| |||||||||||||| |||||
Sbjct: 111 gatctcggatcaggcttcattcctcacacc 140
>48852_osa-miR166i:pmrd
Length = 145
Score = 52.0 bits (26), Expect = 3e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 5 ggtgtttggaatgaagtttgatccaagatc 34
||||||||||||| ||||||||||||||||
Sbjct: 6 ggtgtttggaatgcagtttgatccaagatc 35
Score = 44.1 bits (22), Expect = 7e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattccttacacc 321
||||||||| |||||||||||||| |||||
Sbjct: 111 gatctcggatcaggcttcattcctcacacc 140
>48847_osa-miR166d:pmrd
Length = 125
Score = 52.0 bits (26), Expect = 3e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 289 actgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||||
Sbjct: 84 actgatctcggaccaggcttcattcc 109
>48713_mtr-miR166c:pmrd
Length = 171
Score = 50.1 bits (25), Expect = 1e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcct 315
|||||||||||||||||||||||||
Sbjct: 146 tgatctcggaccaggcttcattcct 170
>54970_zma-miR166n:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 69 tgatctcggaccaggcttcattcc 92
>54968_zma-miR166l:pmrd
Length = 137
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcct 315
||||||||||||||||||||||||
Sbjct: 94 gatctcggaccaggcttcattcct 117
>54959_zma-miR166c:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 67 tgatctcggaccaggcttcattcc 90
>54796_vvi-miR166h:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 64 tgatctcggaccaggcttcattcc 87
>54419_sbi-miR166d:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 62 tgatctcggaccaggcttcattcc 85
>51632_ptc-miR166h:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 67 tgatctcggaccaggcttcattcc 90
>51631_ptc-miR166g:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 69 tgatctcggaccaggcttcattcc 92
>51336_pga-miR166:pmrd
Length = 74
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 293 atctcggaccaggcttcattcctt 316
||||||||||||||||||||||||
Sbjct: 29 atctcggaccaggcttcattcctt 52
>48711_mtr-miR165:pmrd
Length = 82
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 291 tgatctcggaccaggcttcattcc 314
||||||||||||||||||||||||
Sbjct: 57 tgatctcggaccaggcttcattcc 80
>54973_zma-miR166q:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 65 gatctcggaccaggcttcattcc 87
>54972_zma-miR166p:pmrd
Length = 95
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 67 gatctcggaccaggcttcattcc 89
>54961_zma-miR166e:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 63 gatctcggaccaggcttcattcc 85
>54960_zma-miR166d:pmrd
Length = 104
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 80 gatctcggaccaggcttcattcc 102
>54958_zma-miR166b:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 92 gatctcggaccaggcttcattcc 114
>54957_zma-miR166a:pmrd
Length = 213
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 185 gatctcggaccaggcttcattcc 207
>54423_sbi-miR166h:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 158 gatctcggaccaggcttcattcc 180
>54416_sbi-miR166a:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 84 gatctcggaccaggcttcattcc 106
>52336_ptc-miRf10514-akr:pmrd
Length = 144
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcctt 316
|||||||||||||||||||||||
Sbjct: 117 tctcggaccaggcttcattcctt 139
>51641_ptc-miR166q:pmrd
Length = 151
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcctt 316
|||||||||||||||||||||||
Sbjct: 121 tctcggaccaggcttcattcctt 143
>48845_osa-miR166b:pmrd
Length = 206
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 164 gatctcggaccaggcttcattcc 186
>48844_osa-miR166a:pmrd
Length = 145
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 292 gatctcggaccaggcttcattcc 314
|||||||||||||||||||||||
Sbjct: 106 gatctcggaccaggcttcattcc 128
>54426_sbi-miR166k:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcct 315
||||||||||||||||||||||
Sbjct: 81 tctcggaccaggcttcattcct 102
>54974_zma-miR166r:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81
>54971_zma-miR166o:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 67 tctcggaccaggcttcattcc 87
>54965_zma-miR166i:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 61 tctcggaccaggcttcattcc 81
>54577_smo-miR166b:pmrd
Length = 136
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 97 tctcggaccaggcttcattcc 117
>54576_smo-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 106 tctcggaccaggcttcattcc 126
>54424_sbi-miR166i:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 64 tctcggaccaggcttcattcc 84
>54379_pvu-miR166:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 112 tctcggaccaggcttcattcc 132
>51637_ptc-miR166m:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 74 tctcggaccaggcttcattcc 94
>48849_osa-miR166f:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 70 tctcggaccaggcttcattcc 90
>48714_mtr-miR166d:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>48552_gma-miR166q:pmrd
Length = 156
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 134 tctcggaccaggcttcattcc 154
>48549_gma-miR166b:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 126 tctcggaccaggcttcattcc 146
>48345_bna-miR166d:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 75 tctcggaccaggcttcattcc 95
>46951_ath-miR166g:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 83 tctcggaccaggcttcattcc 103
>46948_ath-miR166d:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 85 tctcggaccaggcttcattcc 105
>46947_ath-miR166c:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 294 tctcggaccaggcttcattcc 314
|||||||||||||||||||||
Sbjct: 101 tctcggaccaggcttcattcc 121
>46866_aqc-miR166a:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 295 ctcggaccaggcttcattcct 315
|||||||||||||||||||||
Sbjct: 85 ctcggaccaggcttcattcct 105
