miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00645;MIR169_2;AARH01007603.1/195565-195448 3694:Populus
trichocarpa
Length = 118
Score = 216 bits (109), Expect = 4e-56
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 gtagagatcgagccaagaatgacttgtcggcaggctagcaattgctacgtatagagcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtagagatcgagccaagaatgacttgtcggcaggctagcaattgctacgtatagagcaat 63
Query: 61 atgtatgctagaatgagtattccgccaggtcgttcttggctcaactttg 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgtatgctagaatgagtattccgccaggtcgttcttggctcaactttg 112
>RF00645;MIR169_2;AARH01002993.1/8667-8551 3694:Populus trichocarpa
Length = 117
Score = 89.7 bits (45), Expect = 7e-18
Identities = 88/101 (87%), Gaps = 1/101 (0%)
Strand = Plus / Plus
Query: 9 cgagccaagaatgacttgtcggcaggctagcaattgctacgtatagagcaatatgtatgc 68
|||||||||||||||||| ||||||||||||| |||||| || || |||| ||||||||
Sbjct: 12 cgagccaagaatgacttgccggcaggctagcatttgctagctacagggcaagatgtatgc 71
Query: 69 tagaatgagtattccgccaggtcgttcttggctcaactttg 109
|| | ||| |||||||||||| ||||||||||| ||||||
Sbjct: 72 taaagtga-cattccgccaggttgttcttggctctactttg 111
