miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 283 bits (143), Expect = 3e-76
Identities = 143/143 (100%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgctacatacaagagatcattatgcataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tcttgtttgatagccaaggatgacttgcctgctacatacaagagatcattatgcataaat 96
Query: 61 agaacgaaatatgtacatggtattaattaatgcagtgaaaactcttgtttggttgccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 agaacgaaatatgtacatggtattaattaatgcagtgaaaactcttgtttggttgccagg 36
Query: 121 cagtctccttggctaagctgaca 143
|||||||||||||||||||||||
Sbjct: 35 cagtctccttggctaagctgaca 13
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus trichocarpa
Length = 151
Score = 283 bits (143), Expect = 3e-76
Identities = 143/143 (100%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgctacatacaagagatcattatgcataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tcttgtttgatagccaaggatgacttgcctgctacatacaagagatcattatgcataaat 62
Query: 61 agaacgaaatatgtacatggtattaattaatgcagtgaaaactcttgtttggttgccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agaacgaaatatgtacatggtattaattaatgcagtgaaaactcttgtttggttgccagg 122
Query: 121 cagtctccttggctaagctgaca 143
|||||||||||||||||||||||
Sbjct: 123 cagtctccttggctaagctgaca 145
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgctacatacaagag 44
||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 149 tcttgtttgatagccaaggatgacttgcctgctacttgcaagag 106
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 99 aaactcttgtttggttgccaggcagtctccttggcta 135
||||||||||||| |||||||||||||||||||||||
Sbjct: 57 aaactcttgtttgattgccaggcagtctccttggcta 21
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgctacatacaagag 44
||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 3 tcttgtttgatagccaaggatgacttgcctgctacttgcaagag 46
Score = 65.9 bits (33), Expect = 1e-10
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 99 aaactcttgtttggttgccaggcagtctccttggcta 135
||||||||||||| |||||||||||||||||||||||
Sbjct: 95 aaactcttgtttgattgccaggcagtctccttggcta 131
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
|||||||||||||||||||||||||||||||||
Sbjct: 143 tcttgtttgatagccaaggatgacttgcctgct 111
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
|||||||||||||||||||||||||||||||||
Sbjct: 3 tcttgtttgatagccaaggatgacttgcctgct 35
>RF00865;MIR169_5;AARH01000583.1/30070-29928 3694:Populus
trichocarpa
Length = 143
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
||||||||| |||||||||||||||||||||||
Sbjct: 134 tcttgtttggtagccaaggatgacttgcctgct 102
>RF00865;MIR169_5;AC216452.1/111365-111227 3694:Populus trichocarpa
Length = 139
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
||||||||| |||||||||||||||||||||||
Sbjct: 130 tcttgtttggtagccaaggatgacttgcctgct 98
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
|||||| ||||||||||||||||||||||||||
Sbjct: 140 tcttgtctgatagccaaggatgacttgcctgct 108
>RF00865;MIR169_5;AASG02003632.1/6431-6569 3988:Ricinus communis
(castor bean)
Length = 139
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
|||||||||||||||||| ||||||||||||||
Sbjct: 130 tcttgtttgatagccaagaatgacttgcctgct 98
>RF00645;MIR169_2;AC216452.1/111234-111359 3694:Populus
trichocarpa
Length = 126
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
||||||||| |||||||||||||||||||||||
Sbjct: 3 tcttgtttggtagccaaggatgacttgcctgct 35
>RF00645;MIR169_2;AARH01000583.1/29935-30064 3694:Populus
trichocarpa
Length = 130
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
||||||||| |||||||||||||||||||||||
Sbjct: 3 tcttgtttggtagccaaggatgacttgcctgct 35
>RF00645;MIR169_2;AASG02003632.1/6562-6437 3988:Ricinus communis
(castor bean)
Length = 126
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
|||||||||||||||||| ||||||||||||||
Sbjct: 3 tcttgtttgatagccaagaatgacttgcctgct 35
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgct 33
|||||| ||||||||||||||||||||||||||
Sbjct: 3 tcttgtctgatagccaaggatgacttgcctgct 35
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgc 32
|||||| |||||||||||||||||||||||||
Sbjct: 154 tcttgtctgatagccaaggatgacttgcctgc 123
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgc 32
|||||| |||||||||||||||||||||||||
Sbjct: 3 tcttgtctgatagccaaggatgacttgcctgc 34
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 117 caggcagtctccttggctaagctgaca 143
|||||||||||||||||||||||||||
Sbjct: 39 caggcagtctccttggctaagctgaca 13
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3 ttgtttgatagccaaggatgacttgcctg 31
||||| |||||||||||||||||||||||
Sbjct: 140 ttgttggatagccaaggatgacttgcctg 112
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcct 30
|||||||||||||||||||||||||||
Sbjct: 139 tgtttgatagccaaggatgacttgcct 113
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcct 30
|||||||||||||||||||||||||||
Sbjct: 143 tgtttgatagccaaggatgacttgcct 117
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 117 caggcagtctccttggctaagctgaca 143
|||||||||||||||||||||||||||
Sbjct: 106 caggcagtctccttggctaagctgaca 132
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 3 ttgtttgatagccaaggatgacttgcctg 31
||||| |||||||||||||||||||||||
Sbjct: 5 ttgttggatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 54.0 bits (27), Expect = 5e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctg 31
||||||||| |||||||||||||||||||||
Sbjct: 3 tcttgtttggtagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcct 30
|||||||||||||||||||||||||||
Sbjct: 6 tgtttgatagccaaggatgacttgcct 32
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 54.0 bits (27), Expect = 5e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcct 30
|||||||||||||||||||||||||||
Sbjct: 6 tgtttgatagccaaggatgacttgcct 32
>RF00865;MIR169_5;AASG02003941.1/7647-7771 3988:Ricinus communis
(castor bean)
Length = 125
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcc 29
||||||||||||||||||||||||||
Sbjct: 113 tgtttgatagccaaggatgacttgcc 88
>RF00645;MIR169_2;AASG02003941.1/7763-7653 3988:Ricinus communis
(castor bean)
Length = 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcc 29
||||||||||||||||||||||||||
Sbjct: 5 tgtttgatagccaaggatgacttgcc 30
>RF00865;MIR169_5;ABIM01022203.1/1875-2012 3649:Carica papaya
(papaya)
Length = 138
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcctgc 32
|||||| ||||||||||||||||||||||
Sbjct: 123 tgtttggtagccaaggatgacttgcctgc 95
>RF00865;MIR169_5;AASG02002697.1/24175-24333 3988:Ricinus communis
(castor bean)
Length = 159
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 5 gtttgatagccaaggatgacttgcctgct 33
||||| |||||||||||||||||||||||
Sbjct: 145 gtttggtagccaaggatgacttgcctgct 117
>RF00645;MIR169_2;ABIM01022203.1/2003-1881 3649:Carica papaya
(papaya)
Length = 123
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcctgc 32
|||||| ||||||||||||||||||||||
Sbjct: 7 tgtttggtagccaaggatgacttgcctgc 35
>RF00645;MIR169_2;AASG02002697.1/24326-24181 3988:Ricinus communis
(castor bean)
Length = 146
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 gtttgatagccaaggatgacttgcctgct 33
||||| |||||||||||||||||||||||
Sbjct: 8 gtttggtagccaaggatgacttgcctgct 36
>RF00865;MIR169_5;ABIM01001939.1/16104-16248 3649:Carica papaya
(papaya)
Length = 145
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 3 ttgtttgatagccaaggatgacttgcct 30
||||||| ||||||||||||||||||||
Sbjct: 132 ttgtttggtagccaaggatgacttgcct 105
>RF00865;MIR169_5;ABIM01014270.1/4571-4728 3649:Carica papaya
(papaya)
Length = 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1 tcttgtttgatagccaaggatgacttgcctgc 32
||||||||| |||||||| |||||||||||||
Sbjct: 149 tcttgtttggtagccaagaatgacttgcctgc 118
>RF00865;MIR169_5;AY551203.1/210-25 3702:Arabidopsis thaliana (thale
cress)
Length = 186
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcctg 31
||||| ||||||||||||||||||||||
Sbjct: 174 tgtttaatagccaaggatgacttgcctg 147
>RF00865;MIR169_5;AY551202.1/194-30 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 6 tttgatagccaaggatgacttgcctgct 33
|||| |||||||||||||||||||||||
Sbjct: 151 tttggtagccaaggatgacttgcctgct 124
>RF00865;MIR169_5;AASG02001447.1/39455-39304 3988:Ricinus communis
(castor bean)
Length = 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 gtttgatagccaaggatgacttgcctgc 32
||||| ||||||||||||||||||||||
Sbjct: 138 gtttggtagccaaggatgacttgcctgc 111
>RF00865;MIR169_5;CAAP02000001.1/222970-222840 29760:Vitis vinifera
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 2 cttgtttgatagccaaggatgacttgcctgct 33
||||| || |||||||||||||||||||||||
Sbjct: 121 cttgtgtggtagccaaggatgacttgcctgct 90
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 8 tgatagccaaggatgacttgcctg 31
||||||||||||||||||||||||
Sbjct: 111 tgatagccaaggatgacttgcctg 88
>RF00645;MIR169_2;ABIM01014270.1/4721-4577 3649:Carica papaya
(papaya)
Length = 145
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tcttgtttgatagccaaggatgacttgcctgc 32
||||||||| |||||||| |||||||||||||
Sbjct: 3 tcttgtttggtagccaagaatgacttgcctgc 34
>RF00645;MIR169_2;ABIM01001939.1/16240-16110 3649:Carica papaya
(papaya)
Length = 131
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 3 ttgtttgatagccaaggatgacttgcct 30
||||||| ||||||||||||||||||||
Sbjct: 6 ttgtttggtagccaaggatgacttgcct 33
>RF00645;MIR169_2;AY551202.1/37-188 3702:Arabidopsis thaliana
(thale cress)
Length = 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 6 tttgatagccaaggatgacttgcctgct 33
|||| |||||||||||||||||||||||
Sbjct: 8 tttggtagccaaggatgacttgcctgct 35
>RF00645;MIR169_2;AY551203.1/30-206 3702:Arabidopsis thaliana
(thale cress)
Length = 177
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcctg 31
||||| ||||||||||||||||||||||
Sbjct: 8 tgtttaatagccaaggatgacttgcctg 35
>RF00645;MIR169_2;AASG02001447.1/39312-39449 3988:Ricinus communis
(castor bean)
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 5 gtttgatagccaaggatgacttgcctgc 32
||||| ||||||||||||||||||||||
Sbjct: 7 gtttggtagccaaggatgacttgcctgc 34
>RF00645;MIR169_2;CAAP02000001.1/222847-222964 29760:Vitis
vinifera
Length = 118
Score = 48.1 bits (24), Expect = 3e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2 cttgtttgatagccaaggatgacttgcctgct 33
||||| || |||||||||||||||||||||||
Sbjct: 4 cttgtgtggtagccaaggatgacttgcctgct 35
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tgatagccaaggatgacttgcctg 31
||||||||||||||||||||||||
Sbjct: 7 tgatagccaaggatgacttgcctg 30
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 tgatagccaaggatgacttgcctg 31
||||||||||||||||||||||||
Sbjct: 7 tgatagccaaggatgacttgcctg 30
>RF00865;MIR169_5;AY551206.1/170-33 3702:Arabidopsis thaliana (thale
cress)
Length = 138
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2 cttgtttgatagccaaggatgacttgcctgc 32
||||| || ||||||||||||||||||||||
Sbjct: 129 cttgtgtggtagccaaggatgacttgcctgc 99
>RF00865;MIR169_5;AASG02003632.1/1061-930 3988:Ricinus communis
(castor bean)
Length = 132
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 3 ttgtttgatagccaaggatgacttgcctgct 33
|||||||| ||||||| ||||||||||||||
Sbjct: 121 ttgtttgacagccaagaatgacttgcctgct 91
>RF00865;MIR169_5;AASG02003632.1/10304-10430 3988:Ricinus communis
(castor bean)
Length = 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 3 ttgtttgatagccaaggatgacttgcc 29
||||||| |||||||||||||||||||
Sbjct: 116 ttgtttggtagccaaggatgacttgcc 90
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 gatagccaaggatgacttgcctg 31
|||||||||||||||||||||||
Sbjct: 136 gatagccaaggatgacttgcctg 114
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 8 tgatagccaaggatgacttgcct 30
|||||||||||||||||||||||
Sbjct: 110 tgatagccaaggatgacttgcct 88
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 gatagccaaggatgacttgcctg 31
|||||||||||||||||||||||
Sbjct: 135 gatagccaaggatgacttgcctg 113
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 gatagccaaggatgacttgcctg 31
|||||||||||||||||||||||
Sbjct: 157 gatagccaaggatgacttgcctg 135
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 117 caggcagtctccttggctaagctgaca 143
|||||||||| ||||||||||||||||
Sbjct: 185 caggcagtctacttggctaagctgaca 211
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tagccaaggatgacttgcctgc 32
||||||||||||||||||||||
Sbjct: 14 tagccaaggatgacttgcctgc 35
>RF00645;MIR169_2;AC025808.8/28771-28647 3702:Arabidopsis thaliana
(thale cress)
Length = 125
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 2 cttgtttgatagccaaggatgacttgcctgc 32
||||| || ||||||||||||||||||||||
Sbjct: 3 cttgtgtggtagccaaggatgacttgcctgc 33
>RF00645;MIR169_2;AASG02003632.1/937-1055 3988:Ricinus communis
(castor bean)
Length = 119
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 3 ttgtttgatagccaaggatgacttgcctgct 33
|||||||| ||||||| ||||||||||||||
Sbjct: 5 ttgtttgacagccaagaatgacttgcctgct 35
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum
bicolor (sorghum)
Length = 139
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gatagccaaggatgacttgcctg 31
|||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcctg 33
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 gatagccaaggatgacttgcctg 31
|||||||||||||||||||||||
Sbjct: 11 gatagccaaggatgacttgcctg 33
>RF00865;MIR169_5;AC189356.2/133226-133094 51351:Brassica rapa
subsp. pekinensis
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 11 tagccaaggatgacttgcctgc 32
||||||||||||||||||||||
Sbjct: 114 tagccaaggatgacttgcctgc 93
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tttgatagccaaggatgacttgcctg 31
|||| |||||||||||||||||||||
Sbjct: 153 tttggtagccaaggatgacttgcctg 128
>RF00865;MIR169_5;AY551200.1/193-29 3702:Arabidopsis thaliana (thale
cress)
Length = 165
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tttgatagccaaggatgacttgcctg 31
|||| |||||||||||||||||||||
Sbjct: 151 tttggtagccaaggatgacttgcctg 126
>RF00865;MIR169_5;AARH01003823.1/108214-108346 3694:Populus
trichocarpa
Length = 133
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcc 29
|||||| |||||||||||||||||||
Sbjct: 121 tgtttggtagccaaggatgacttgcc 96
>RF00865;MIR169_5;AARH01006471.1/67165-67023 3694:Populus
trichocarpa
Length = 143
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 5 gtttgatagccaaggatgacttgcct 30
||||| ||||||||||||||||||||
Sbjct: 127 gtttggtagccaaggatgacttgcct 102
>RF00865;MIR169_5;AARH01000472.1/145584-145453 3694:Populus
trichocarpa
Length = 132
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 4 tgtttgatagccaaggatgacttgcc 29
|||||| |||||||||||||||||||
Sbjct: 120 tgtttggtagccaaggatgacttgcc 95
>RF00865;MIR169_5;ABXC01000010.1/150949-151088 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tttgatagccaaggatgacttgcctg 31
|||||||||||||||||| |||||||
Sbjct: 125 tttgatagccaaggatgatttgcctg 100
>RF00645;MIR169_2;AC189356.2/133102-133219 51351:Brassica rapa
subsp. pekinensis
Length = 118
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tagccaaggatgacttgcctgc 32
||||||||||||||||||||||
Sbjct: 12 tagccaaggatgacttgcctgc 33
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tttgatagccaaggatgacttgcctg 31
|||| |||||||||||||||||||||
Sbjct: 7 tttggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AB016889.1/38604-38454 3702:Arabidopsis thaliana
(thale cress)
Length = 151
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tttgatagccaaggatgacttgcctg 31
|||| |||||||||||||||||||||
Sbjct: 7 tttggtagccaaggatgacttgcctg 32
>RF00645;MIR169_2;AARH01006471.1/67030-67159 3694:Populus
trichocarpa
Length = 130
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 gtttgatagccaaggatgacttgcct 30
||||| ||||||||||||||||||||
Sbjct: 10 gtttggtagccaaggatgacttgcct 35
>RF00645;MIR169_2;AARH01003823.1/108339-108220 3694:Populus
trichocarpa
Length = 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcc 29
|||||| |||||||||||||||||||
Sbjct: 6 tgtttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;AARH01000472.1/145460-145578 3694:Populus
trichocarpa
Length = 119
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 4 tgtttgatagccaaggatgacttgcc 29
|||||| |||||||||||||||||||
Sbjct: 6 tgtttggtagccaaggatgacttgcc 31
>RF00645;MIR169_2;ABXC01000010.1/151081-150955 4558:Sorghum
bicolor (sorghum)
Length = 127
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 tttgatagccaaggatgacttgcctg 31
|||||||||||||||||| |||||||
Sbjct: 9 tttgatagccaaggatgatttgcctg 34
