miRNEST 2.0, an integrative microRNA resource :: BLAST
>46823_miR171:micropc
Length = 91
Score = 73.8 bits (37), Expect = 2e-14
Identities = 79/91 (86%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatc 63
|||||||||||||||||||||||||||||| ||||||| || | | |||||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
Query: 64 cgatctcagattgagccgcgccaatatcact 94
|||||||||||||||||||||||||||||||
Sbjct: 61 cgatctcagattgagccgcgccaatatcact 91
>46414_miR171:micropc
Length = 89
Score = 69.9 bits (35), Expect = 3e-13
Identities = 77/89 (86%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatcc 64
||||||||||||||||||||||||||||| ||||||| || | | ||||||| |
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
Query: 65 gatctcagattgagccgcgccaatatcac 93
|||||||||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>46256_miR171:micropc
Length = 89
Score = 69.9 bits (35), Expect = 3e-13
Identities = 77/89 (86%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaagacagatttacac---gagtgaaa-gtaaaatcc 64
||||||||||||||||||||||||||||| ||||||| || | | ||||||| |
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
Query: 65 gatctcagattgagccgcgccaatatcac 93
|||||||||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>44930_miR171:micropc
Length = 86
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 56 gtaaaatccgatctcagattgagccgcgccaatatca 92
||||||| |||||||||||||||||||||||||||||
Sbjct: 50 gtaaaatacgatctcagattgagccgcgccaatatca 86
>46236_miR171:micropc
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 56 gtaaaatccgatctcagattgagccgcgccaatatc 91
||||||| ||||||||||||||||||||||||||||
Sbjct: 50 gtaaaatacgatctcagattgagccgcgccaatatc 85
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacagatttac 45
||||||||||||||||||||||||||| |||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttac 35
>45865_miR171:micropc
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 56 gtaaaatccgatctcagattgagccgcgccaatatc 91
||||||| ||||||||||||||||||||||||||||
Sbjct: 50 gtaaaatacgatctcagattgagccgcgccaatatc 85
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacagatttac 45
||||||||||||||||||||||||||| |||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttac 35
>45007_miR171:micropc
Length = 85
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 56 gtaaaatccgatctcagattgagccgcgccaatatc 91
||||||| ||||||||||||||||||||||||||||
Sbjct: 50 gtaaaatacgatctcagattgagccgcgccaatatc 85
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacagatttac 45
||||||||||||||||||||||||||| |||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttac 35
>46075_miR171:micropc
Length = 83
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 56 gtaaaatccgatctcagattgagccgcgccaatat 90
||||||| |||||||||||||||||||||||||||
Sbjct: 49 gtaaaatacgatctcagattgagccgcgccaatat 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 12 atgttggtgaggttcaatccgaagacagatttac 45
|||||||||||||||||||||||||| |||||||
Sbjct: 1 atgttggtgaggttcaatccgaagacggatttac 34
>45507_miR171:micropc
Length = 88
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatcact 94
|||||||||||||||||||||||||||||||
Sbjct: 58 cgatctcagattgagccgcgccaatatcact 88
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccgaagac 37
||||||||||||||||||||||||||||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagac 30
>45439_miR171:micropc
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatcac 93
||||||||||||||||||||||||||||||
Sbjct: 57 cgatctcagattgagccgcgccaatatcac 86
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaagac 37
|||||||||||||||||||||||||||||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagac 29
>45180_miR171:micropc
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatcac 93
||||||||||||||||||||||||||||||
Sbjct: 57 cgatctcagattgagccgcgccaatatcac 86
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaagac 37
|||||||||||||||||||||||||||||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagac 29
>46191_miR171:micropc
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatca 92
|||||||||||||||||||||||||||||
Sbjct: 55 cgatctcagattgagccgcgccaatatca 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagac 37
|||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagac 27
>45723_miR171:micropc
Length = 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatc 91
||||||||||||||||||||||||||||
Sbjct: 55 cgatctcagattgagccgcgccaatatc 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagac 37
|||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagac 27
>45597_miR171:micropc
Length = 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatc 91
||||||||||||||||||||||||||||
Sbjct: 55 cgatctcagattgagccgcgccaatatc 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagac 37
|||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagac 27
>45121_miR171:micropc
Length = 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatatc 91
||||||||||||||||||||||||||||
Sbjct: 55 cgatctcagattgagccgcgccaatatc 82
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagac 37
|||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagac 27
>46459_miR171:micropc
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 64 cgatctcagattgagccgcgccaatat 90
|||||||||||||||||||||||||||
Sbjct: 54 cgatctcagattgagccgcgccaatat 80
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 atgttggtgaggttcaatccgaagac 37
||||||||||||||||||||||||||
Sbjct: 1 atgttggtgaggttcaatccgaagac 26
