miRNEST 2.0, an integrative microRNA resource :: BLAST
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 167 bits (84), Expect = 2e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 1 gaaagtgggggatgttgggatggctcaatcatgtcaaatctcccaaattatgatgttggg 60
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1 gaaagtgggggatgttgggatggctcaatcatatcaaatctcccaaactatgatgttggg 60
Query: 61 tcttttaatctgattgagccgtgccaatatcacact 96
|| |||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtttaatctgattgagccgtgccaatatcacact 96
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 74/85 (87%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 8 ggggatgttgggatggctcaatcatgtcaaatctcccaaattatgatgttgggtctttta 67
||||||||||| |||||||||||| ||||||||||||| | | ||||||| ||||
Sbjct: 10 ggggatgttggaatggctcaatcaaatcaaatctcccaag----ggttttgggtccttta 65
Query: 68 atctgattgagccgtgccaatatca 92
|||||||||||||||||||||||||
Sbjct: 66 atctgattgagccgtgccaatatca 90
>40363_rco-MIR171e:mirbase
Length = 84
Score = 79.8 bits (40), Expect = 3e-16
Identities = 73/84 (86%), Gaps = 5/84 (5%)
Strand = Plus / Plus
Query: 8 ggggatgttgggatggctcaatcatgtcaaatctcccaaattatgatgttgggtctttta 67
||||||||||| |||||||||||| |||||||||||||| | | |||||| ||||
Sbjct: 1 ggggatgttggaatggctcaatcaaatcaaatctcccaaagttt-----tgggtccttta 55
Query: 68 atctgattgagccgtgccaatatc 91
||||||||||||||||||||||||
Sbjct: 56 atctgattgagccgtgccaatatc 79
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 69.9 bits (35), Expect = 3e-13
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 8 ggggatgttgggatggctcaatcatgtcaaatctcccaaattatgatgttgggtctttta 67
||||||||||| |||||||||||| ||||||||||||| | | | ||||| |||||
Sbjct: 16 ggggatgttggaatggctcaatcaaatcaaatctcccaagcttt--ttatgggtgtttta 73
Query: 68 atctgattgagccgtgccaatatcac 93
|| |||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatatcac 99
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 56 ttgggtcttttaatctgattgagccgtgccaatatcac 93
||||||| ||||||||||||||||||||||||||||||
Sbjct: 40 ttgggtcctttaatctgattgagccgtgccaatatcac 77
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 55 gttgggtcttttaatctgattgagccgtgccaatatca 92
|||| ||| |||||||||||||||||||||||||||||
Sbjct: 52 gttgagtcctttaatctgattgagccgtgccaatatca 89
>40361_rco-MIR171c:mirbase
Length = 87
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 64 tttaatctgattgagccgtgccaatatc 91
||||||||||||||||||||||||||||
Sbjct: 55 tttaatctgattgagccgtgccaatatc 82
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 64 tttaatctgattgagccgtgccaatatcaca 94
|||| ||||||||||||||||||||||||||
Sbjct: 68 tttagtctgattgagccgtgccaatatcaca 98
>41986_osa-MIR171f:mirbase
Length = 127
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatcaca 94
||||||||||||||||||||||||||
Sbjct: 95 tctgattgagccgtgccaatatcaca 120
>42770_zma-MIR171j:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatcac 93
|||||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatcac 112
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatcac 93
|||||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatcac 115
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 55 gttgggtcttttaatctgattgagccgtgccaatatc 91
||||||| ||| ||||||||||||||||||||||||
Sbjct: 49 gttgggttctttcatctgattgagccgtgccaatatc 85
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcaca 94
||||||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatcaca 88
>42766_zma-MIR171f:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcaca 94
||||||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatcaca 138
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcaca 94
||||||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatcaca 145
>41874_far-MIR171:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 atctgattgagccgtgccaatatc 91
||||||||||||||||||||||||
Sbjct: 87 atctgattgagccgtgccaatatc 110
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 atctgattgagccgtgccaatatc 91
||||||||||||||||||||||||
Sbjct: 111 atctgattgagccgtgccaatatc 134
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcaca 94
||||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatcaca 95
>42765_zma-MIR171e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42762_zma-MIR171b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatcac 84
>42640_tae-MIR171a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatcac 84
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatcac 91
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatcac 92
>41890_hvu-MIR171:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatcac 86
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatcac 89
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatcac 92
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatcac 94
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatcac 183
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 69 tctgattgagccgtgccaatatc 91
|||||||||||||||||||||||
Sbjct: 93 tctgattgagccgtgccaatatc 115
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatcac 89
>40360_rco-MIR171b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatcac 85
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatcac 86
>40318_bra-MIR171a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatcac 84
>40305_bol-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatcac 90
>40289_bna-MIR171e:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatcac 89
>40288_bna-MIR171d:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatcac 90
>40062_ath-MIR171c:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatcac 109
>39851_aly-MIR171c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcac 93
|||||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatcac 96
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcac 111
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcacact 96
||||||||||||||||||||| ||||
Sbjct: 80 tgattgagccgtgccaatatctcact 105
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 71 tgattgagccgtgccaatatcacact 96
||||||||||||||||||||| ||||
Sbjct: 80 tgattgagccgtgccaatatctcact 105
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcac 108
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 72 gattgagccgtgccaatatcac 93
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
