miRNEST 2.0, an integrative microRNA resource :: BLAST
>41499_ptc-MIR479:mirbase
Length = 85
Score = 168 bits (85), Expect = 5e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 15 ggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatga 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttcttcactcatga 60
Query: 75 agacgagccgaatcaatatcactct 99
|||||||||||||||||||||||||
Sbjct: 61 agacgagccgaatcaatatcactct 85
>41393_ptc-MIR171m:mirbase
Length = 101
Score = 81.8 bits (41), Expect = 1e-16
Identities = 91/106 (85%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 4 gaagtagacacggtgtgatattggtccggctcatcttctgtgcataagcatctgaagttc 63
|||| ||||| || ||| ||||| ||||||||||||||||| || ||||| |||||||
Sbjct: 1 gaagcagacatggcgtggtattgatccggctcatcttctgt--atttgcatcagaagttc 58
Query: 64 ttcactcatgaagacgagccgaatcaatatcactcttgtatgcttc 109
||| || ||||||||||||||||||||||||||||||| |||||
Sbjct: 59 ttcgct---gaagacgagccgaatcaatatcactcttgtacgcttc 101
>41258_csi-MIR479:mirbase
Length = 147
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 75 agacgagccgaatcaatatcactcttgtatgcttctt 111
|||||||||||||||||||||||||||||||||||||
Sbjct: 94 agacgagccgaatcaatatcactcttgtatgcttctt 130
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 ggagaagtagacacggtgtgatattggtccggctcatctt 40
||||||||||||| |||||||||||||| |||||||||||
Sbjct: 4 ggagaagtagacatggtgtgatattggttcggctcatctt 43
>41232_csi-MIR171b:mirbase
Length = 165
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 75 agacgagccgaatcaatatcactcttgtatgcttctt 111
|||||||||||||||||||||||||||||||||||||
Sbjct: 119 agacgagccgaatcaatatcactcttgtatgcttctt 155
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 ggagaagtagacacggtgtgatattggtccggctcatctt 40
||||||||||||| |||||||||||||| |||||||||||
Sbjct: 29 ggagaagtagacatggtgtgatattggttcggctcatctt 68
>41394_ptc-MIR171n:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 72 tgaagacgagccgaatcaatatcactcttgtatgcttc 109
|||||||||||||||||||||||||||||||| |||||
Sbjct: 64 tgaagacgagccgaatcaatatcactcttgtacgcttc 101
>41686_vvi-MIR479:mirbase
Length = 94
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 74 aagacgagccgaatcaatatcactcttgtatgcttc 109
||||||||||||| ||||||||||||||||||||||
Sbjct: 59 aagacgagccgaaccaatatcactcttgtatgcttc 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 7 gtagacacggtgtgatattggtccggctcatcttct 42
||||||| |||||| ||||||| |||||||||||||
Sbjct: 1 gtagacatggtgtggtattggttcggctcatcttct 36
>40456_gma-MIR171b:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 75 agacgagccgaatcaatatcactcttgtatgctt 108
|||||||||||||||||||||||||||| |||||
Sbjct: 59 agacgagccgaatcaatatcactcttgtttgctt 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tagacacggtgtgatattggtccggctcatctt 40
||||||||| ||||||||||| |||||||||||
Sbjct: 1 tagacacggcgtgatattggtacggctcatctt 33
>40455_gma-MIR171b:mirbase
Length = 92
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 75 agacgagccgaatcaatatcactcttgtatgctt 108
|||||||||||||||||||||||||||| |||||
Sbjct: 59 agacgagccgaatcaatatcactcttgtttgctt 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 tagacacggtgtgatattggtccggctcatctt 40
||||||||| ||||||||||| |||||||||||
Sbjct: 1 tagacacggcgtgatattggtacggctcatctt 33
>41064_ghr-MIR479:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 78 cgagccgaatcaatatcactcttgtatgctt 108
||||||||||||||||||||| |||||||||
Sbjct: 63 cgagccgaatcaatatcactcatgtatgctt 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1 ggagaagtagacacggtgtgatattggtccggctcatctt 40
|||| |||||||||| ||||||||||| |||||||||||
Sbjct: 1 ggaggagtagacacgacgtgatattggttcggctcatctt 40
