miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00778;MIR473;AARH01006068.1/81131-81233 3694:Populus trichocarpa
          Length = 103

 Score =  198 bits (100), Expect = 9e-51
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgttcactctccctcaaggcttccaacgcaataaccagctacgtacatgtaactgtgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   attgttcactctccctcaaggcttccaacgcaataaccagctacgtacatgtaactgtgt 60

                                                   
Query: 61  tacggctgcaggcttgaggcctttgggggagagtggtcaa 100
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacggctgcaggcttgaggcctttgggggagagtggtcaa 100




>RF00778;MIR473;AARH01001156.1/33571-33672 3694:Populus
          trichocarpa
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                      
Query: 9  ctctccctcaaggcttccaacgcaataaccagctacgtacatgt 52
          |||||||||| ||||||||||||| ||| ||| ||||| |||||
Sbjct: 9  ctctccctcagggcttccaacgcagtaagcaggtacgtgcatgt 52