miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46130_miR319:micropc
          Length = 176

 Score =  153 bits (77), Expect = 7e-38
 Identities = 152/173 (87%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  aagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatg 87
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1   aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60

                                                                       
Query: 88  gatacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatg 146
           ||| ||| ||||||||| ||| ||   ||||   |  | |||| ||||| ||| ||||||
Sbjct: 61  gatgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatg 118

                                                                
Query: 147 acccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
           ||||||||||||||||  ||| | |||||||||||||||||||||||||||||
Sbjct: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 171




>45648_miR159:micropc
          Length = 176

 Score =  153 bits (77), Expect = 7e-38
 Identities = 152/173 (87%), Gaps = 3/173 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  aagagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatg 87
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1   aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60

                                                                       
Query: 88  gatacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatg 146
           ||| ||| ||||||||| ||| ||   ||||   |  | |||| ||||| ||| ||||||
Sbjct: 61  gatgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatg 118

                                                                
Query: 147 acccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
           ||||||||||||||||  ||| | |||||||||||||||||||||||||||||
Sbjct: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 171




>46497_miR159:micropc
          Length = 172

 Score =  149 bits (75), Expect = 1e-36
 Identities = 150/171 (87%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 90  tacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatgac 148
           | ||| ||||||||| ||| ||   ||||   |  | |||| ||||| ||| ||||||||
Sbjct: 61  tgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatgac 118

                                                              
Query: 149 ccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
           ||||||||||||||  ||| | |||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 169




>45773_miR159:micropc
          Length = 172

 Score =  149 bits (75), Expect = 1e-36
 Identities = 150/171 (87%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 90  tacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatgac 148
           | ||| ||||||||| ||| ||   ||||   |  | |||| ||||| ||| ||||||||
Sbjct: 61  tgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatgac 118

                                                              
Query: 149 ccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
           ||||||||||||||  ||| | |||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 169




>45590_miR319:micropc
          Length = 173

 Score =  149 bits (75), Expect = 1e-36
 Identities = 150/171 (87%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 90  tacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatgac 148
           | ||| ||||||||| ||| ||   ||||   |  | |||| ||||| ||| ||||||||
Sbjct: 61  tgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatgac 118

                                                              
Query: 149 ccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
           ||||||||||||||  ||| | |||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 169




>45258_miR319:micropc
          Length = 173

 Score =  149 bits (75), Expect = 1e-36
 Identities = 150/171 (87%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 30  gagctcccttcgatccaatccaggaggggaagtggtcggatgcagctgccggttcatgga 89
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1   gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60

                                                                       
Query: 90  tacctgtctggtgcatgcagtgtggtaatagcctgc-gcacctgcatcggtttgcatgac 148
           | ||| ||||||||| ||| ||   ||||   |  | |||| ||||| ||| ||||||||
Sbjct: 61  tgcctctctggtgca-gcaatg-actaatgctcacctgcacttgcatgggtgtgcatgac 118

                                                              
Query: 149 ccgggagatgaacctgccagcgtctttccctcgtgcttggattgaagggag 199
           ||||||||||||||  ||| | |||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggag 169




>46779_miR159:micropc
          Length = 164

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  agagctcccttcgatccaat 48
           ||||||||||||||||||||
Sbjct: 164 agagctcccttcgatccaat 145




>45391_miR159:micropc
          Length = 165

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  agagctcccttcgatccaat 48
           ||||||||||||||||||||
Sbjct: 164 agagctcccttcgatccaat 145