miRNEST 2.0, an integrative microRNA resource :: BLAST
>54645_sof-miR396:pmrd
Length = 134
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtgggaaatttcagagagaggccaa 139
|||||||||||||||||||||||| | ||||||||||||||
Sbjct: 94 gcagttcaataaagctgtgggaaactgcagagagaggccaa 134
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 atggccctctctgtgatcttccacagctttcttgaactgc 54
|||||| ||| |||||||||||||||||||||||||||||
Sbjct: 3 atggccttctttgtgatcttccacagctttcttgaactgc 42
>54486_sbi-miR396b:pmrd
Length = 128
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtgggaaatttcagagagaggccaa 139
|||||||||||||||||||||||| | ||||||||||||||
Sbjct: 88 gcagttcaataaagctgtgggaaactgcagagagaggccaa 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 atggccctctctgtgatcttccacagctttcttgaactgc 54
|||||| ||| |||||||||||||||||||||||||||||
Sbjct: 3 atggccttctttgtgatcttccacagctttcttgaactgc 42
>54485_sbi-miR396a:pmrd
Length = 125
Score = 65.9 bits (33), Expect = 8e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 98 ggcagttcaataaagctgtgggaaatttcagagagag 134
||||||||||||||||||||||||||| |||||||||
Sbjct: 84 ggcagttcaataaagctgtgggaaattgcagagagag 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgc 42
>55073_zma-miR396b:pmrd
Length = 136
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 15 atggccctctctgtgatcttccacagctttcttgaactgc 54
|||||| ||| |||||||||||||||||||||||||||||
Sbjct: 3 atggccttctttgtgatcttccacagctttcttgaactgc 42
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtgggaaatttcagagagaggcca 138
|||||||||||||||||||||||| | |||||||||||||
Sbjct: 96 gcagttcaataaagctgtgggaaactgcagagagaggcca 135
>55072_zma-miR396a:pmrd
Length = 137
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtgggaaatttcagagagaggcca 138
|||||||||||||||||||||||| | |||||||||||||
Sbjct: 97 gcagttcaataaagctgtgggaaactgcagagagaggcca 136
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgc 42
>48946_osa-miR396b:pmrd
Length = 116
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 87 ttgcacgagagggcagttcaataaagctgtgggaaatttcagag 130
||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 73 ttgcacgagtgtgcagttcaataaagctgtgggaaattacagag 116
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 26 tgtgatcttccacagctttcttgaactgc 54
|||| ||||||||||||||||||||||||
Sbjct: 4 tgtggtcttccacagctttcttgaactgc 32
>55079_zma-miR396h:pmrd
Length = 116
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 94 agagggcagttcaataaagctgtgggaaat 123
||||||||||||||||||||||||||||||
Sbjct: 87 agagggcagttcaataaagctgtgggaaat 116
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 30 atcttccacagctttcttgaactgc 54
|||||||||||||||||||||||||
Sbjct: 1 atcttccacagctttcttgaactgc 25
>54870_vvi-miR396c:pmrd
Length = 108
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 24 tctgtgatcttccacagctttcttgaactg 53
||||||||||||||||||||||||||||||
Sbjct: 2 tctgtgatcttccacagctttcttgaactg 31
>48945_osa-miR396a:pmrd
Length = 154
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 93 gagagggcagttcaataaagctgtgggaaatttcagag 130
||||| |||||||||||||||||||||||||| |||||
Sbjct: 117 gagagagcagttcaataaagctgtgggaaattgcagag 154
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 26 tgtgatcttccacagctttcttgaactgc 54
|||||||||||||||||||||||||||||
Sbjct: 4 tgtgatcttccacagctttcttgaactgc 32
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 19 ccctctctgtgatcttccacagctttcttgaactgc 54
|||||||||| ||||||||||||||||||||||||
Sbjct: 4 ccctctctgtattcttccacagctttcttgaactgc 39
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 130 gttcaataaagctgtgggaa 149
>48578_gma-miR396a:pmrd
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 14 catggccctctctgtgatcttccacagctttcttgaactgc 54
|||||| |||| ||| ||||||||||||||||||||||||
Sbjct: 2 catggctctctttgtattcttccacagctttcttgaactgc 42
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 103 gttcaataaagctgtgggaa 122
>55074_zma-miR396c:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 2 tcttccacagctttcttgaactgc 25
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtgggaaa 122
||||||||||||||||||||||||
Sbjct: 80 gcagttcaataaagctgtgggaaa 103
>54871_vvi-miR396d:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgc 32
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 90 gttcaataaagctgtgggaa 109
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 7 tcttccacagctttcttgaactgc 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 104 gttcaataaagctgtgggaa 123
>51735_ptc-miR396b:pmrd
Length = 132
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgc 32
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 106 gttcaataaagctgtgggaa 125
>51734_ptc-miR396a:pmrd
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgc 32
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 97 gttcaataaagctgtgggaa 116
>48680_lja-miR396:pmrd
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaactgc 37
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 76 gttcaataaagctgtgggaa 95
>47008_ath-miR396a:pmrd
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tcttccacagctttcttgaactgc 54
||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgc 32
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaa 121
||||||||||||||||||||
Sbjct: 123 gttcaataaagctgtgggaa 142
>55083_zma-miR396l:pmrd
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtggga 120
||||||||||||||||||||||
Sbjct: 76 gcagttcaataaagctgtggga 97
>55082_zma-miR396k:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtggga 120
||||||||||||||||||||||
Sbjct: 77 gcagttcaataaagctgtggga 98
>55081_zma-miR396j:pmrd
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 99 gcagttcaataaagctgtggga 120
||||||||||||||||||||||
Sbjct: 77 gcagttcaataaagctgtggga 98
>55080_zma-miR396i:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
>48508_ghr-miR396c:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
>48507_ghr-miR396b:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
>48485_gcl-miR396a:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 101 ttccacagctttcttgaactgc 80
>46887_aqc-miR396a:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaactgc 54
||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgc 22
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 gttcaataaagctgtgggaaa 122
|||||||||||||||||||||
Sbjct: 102 gttcaataaagctgtgggaaa 122
>55078_zma-miR396g:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>55077_zma-miR396f:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 3 ttccacagctttcttgaact 22
>54869_vvi-miR396b:pmrd
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54868_vvi-miR396a:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>54487_sbi-miR396c:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 142 ttccacagctttcttgaact 123
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 93 ttccacagctttcttgaact 74
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 134 ttccacagctttcttgaact 115
>51738_ptc-miR396e:pmrd
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51737_ptc-miR396d:pmrd
Length = 154
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51736_ptc-miR396c:pmrd
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>51564_pta-miR396:pmrd
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
>48947_osa-miR396c:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>48748_mtr-miR396a:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>48580_gma-miR396c:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48579_gma-miR396b:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>48374_bna-miR396a:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>47009_ath-miR396b:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>46888_aqc-miR396b:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 33 ttccacagctttcttgaact 52
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
