miRNEST 2.0, an integrative microRNA resource :: BLAST
>54636_sof-miR168a:pmrd
Length = 104
Score = 151 bits (76), Expect = 1e-37
Identities = 92/96 (95%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggat 69
|||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||||
Sbjct: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggat 66
Query: 70 cccgccttgcaccaagtgaatcggagccggcgcagc 105
||||||||||||||||||||||||||||||||||||
Sbjct: 67 cccgccttgcaccaagtgaatcggagccggcgcagc 102
>54999_zma-miR168a:pmrd
Length = 104
Score = 145 bits (73), Expect = 7e-36
Identities = 92/97 (94%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggat 69
|||||||||||||||||||||||||||||||||||| ||||||| || |||||| |||||
Sbjct: 8 cgccgcctcgggctcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggat 66
Query: 70 cccgccttgcaccaagtgaatcggagccggcgcagcg 106
|||||||||||||||||||||||||||||||| ||||
Sbjct: 67 cccgccttgcaccaagtgaatcggagccggcggagcg 103
>55000_zma-miR168b:pmrd
Length = 104
Score = 137 bits (69), Expect = 2e-33
Identities = 91/97 (93%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggat 69
||||| |||||||||||||||||||||||||||||| ||||||| || |||||| |||||
Sbjct: 8 cgccgtctcgggctcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggat 66
Query: 70 cccgccttgcaccaagtgaatcggagccggcgcagcg 106
||||||||||| |||||||||||||||||||||||||
Sbjct: 67 cccgccttgcatcaagtgaatcggagccggcgcagcg 103
>48661_hvv-miR168:pmrd
Length = 66
Score = 131 bits (66), Expect = 1e-31
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 23 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttgcacc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttgcacc 60
Query: 83 aagtga 88
||||||
Sbjct: 61 aagtga 66
>54637_sof-miR168b:pmrd
Length = 103
Score = 117 bits (59), Expect = 2e-27
Identities = 82/87 (94%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 19 gggctcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttg 78
|||||||||||| |||||||||||||| ||||||| || |||||| ||||||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggcc-gacgggacggatcccgccttg 74
Query: 79 caccaagtgaatcggagccggcgcagc 105
|||||||||||||||||||||||||||
Sbjct: 75 caccaagtgaatcggagccggcgcagc 101
>48873_osa-miR168a:pmrd
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgac-gggccggatcc 71
||||||||||||||||||||||||||||||||| ||||| | | | | |||||||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 72 cgccttgcaccaagtgaatcggagccg 98
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>48872_osa-miR168a:pmrd
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgac-gggccggatcc 71
||||||||||||||||||||||||||||||||| ||||| | | | | |||||||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 72 cgccttgcaccaagtgaatcggagccg 98
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>48871_osa-miR168a:pmrd
Length = 87
Score = 109 bits (55), Expect = 4e-25
Identities = 80/87 (91%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 13 cgcctcgggctcgcttggtgcagatcgggaccctccgcccgccccgac-gggccggatcc 71
||||||||||||||||||||||||||||||||| ||||| | | | | |||||||||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcc 60
Query: 72 cgccttgcaccaagtgaatcggagccg 98
|||||||||||||||||||||||||||
Sbjct: 61 cgccttgcaccaagtgaatcggagccg 87
>54436_sbi-miR168:pmrd
Length = 106
Score = 105 bits (53), Expect = 6e-24
Identities = 87/97 (89%), Gaps = 1/97 (1%)
Strand = Plus / Plus
Query: 10 cgccgcctcgggctcgcttggtgcagatcgggaccctccgcc-cgccccgacgggccgga 68
||||||||||||||||||||||||||||||||||| ||||| || | |||||| | ||
Sbjct: 8 cgccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacaga 67
Query: 69 tcccgccttgcaccaagtgaatcggagccggcgcagc 105
||||||||||||||||||||||| ||||||| |||||
Sbjct: 68 tcccgccttgcaccaagtgaatccgagccggagcagc 104
>55002_zma-miR168m:pmrd
Length = 65
Score = 91.7 bits (46), Expect = 1e-19
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 23 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttgcacc 82
||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggatcccgccttgcacc 59
Query: 83 aagtga 88
||||||
Sbjct: 60 aagtga 65
>54655_ssp-miR168:pmrd
Length = 65
Score = 91.7 bits (46), Expect = 1e-19
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 23 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccgccttgcacc 82
||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccggcc-gacgggacggatcccgccttgcacc 59
Query: 83 aagtga 88
||||||
Sbjct: 60 aagtga 65
>48875_osa-miR168m:pmrd
Length = 67
Score = 69.9 bits (35), Expect = 4e-13
Identities = 60/67 (89%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 23 tcgcttggtgcagatcgggaccctccgcccgccccgac-gggccggatcccgccttgcac 81
||||||||||||||||||||||| ||||| | | | | |||||||||||||||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgccgccgctgccggggccggatcccgccttgcac 60
Query: 82 caagtga 88
|||||||
Sbjct: 61 caagtga 67
>55001_zma-miR168c:pmrd
Length = 67
Score = 61.9 bits (31), Expect = 9e-11
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 23 tcgcttggtgcagatcgggaccctccgcccgccccgacgggccggatcccg-ccttgcac 81
||||||| ||||||||||||||| |||||| | ||||||| ||||||||| |||||||
Sbjct: 1 tcgcttgttgcagatcgggacccgccgccccgcgcgacgggacggatcccgcccttgcat 60
Query: 82 caagtga 88
|||||||
Sbjct: 61 caagtga 67
>54802_vvi-miR168:pmrd
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 67 gatcccgccttgcaccaagtgaatcggagccggc 100
|||||||||||||| ||| |||||||||| ||||
Sbjct: 99 gatcccgccttgcatcaactgaatcggagacggc 132
>51651_ptc-miR168b:pmrd
Length = 136
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 ggatcccgccttgcaccaagtgaatcggag 95
||||||||||||||| ||| ||||||||||
Sbjct: 106 ggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 ggatcccgccttgcaccaagtgaatcggag 95
||||||||||||||| ||| ||||||||||
Sbjct: 130 ggatcccgccttgcatcaactgaatcggag 159
>48560_gma-miR168:pmrd
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 66 ggatcccgccttgcaccaagtgaatcggag 95
||||||||||||||| ||| ||||||||||
Sbjct: 84 ggatcccgccttgcatcaactgaatcggag 113
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 66 ggatcccgccttgcaccaagtgaatcgga 94
||||||||||||||| ||| |||||||||
Sbjct: 94 ggatcccgccttgcatcaactgaatcgga 122
>46957_ath-miR168a:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 66 ggatcccgccttgcaccaagtgaatcgga 94
||||||||||||||| ||| |||||||||
Sbjct: 99 ggatcccgccttgcatcaactgaatcgga 127
