miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48752_mtr-miR399c:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 ggtttgccaaaggagatttgccc 120
|||||||||||||||||||||||
Sbjct: 76 ggtttgccaaaggagatttgccc 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tttgccaaaggagatttgcc 38
||||||||||||||||||||
Sbjct: 78 tttgccaaaggagatttgcc 97
>51747_ptc-miR399a:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgccaaaggagatttgccccg 122
|||||||||||||||||||||
Sbjct: 91 tgccaaaggagatttgccccg 111
>48513_ghr-miR399b:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tttgccaaaggagatttgccc 120
|||||||||||||||||||||
Sbjct: 55 tttgccaaaggagatttgccc 75
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tttgccaaaggagatttgcc 38
||||||||||||||||||||
Sbjct: 55 tttgccaaaggagatttgcc 74
>47535_ath-miRf10435-akr:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgccaaaggagatttgccccg 122
|||||||||||||||||||||
Sbjct: 66 tgccaaaggagatttgccccg 86
>47018_ath-miR399d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 tgccaaaggagatttgccccg 122
|||||||||||||||||||||
Sbjct: 70 tgccaaaggagatttgccccg 90
>54883_vvi-miR399g:pmrd
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 tgccaaaggagatttgcccc 121
||||||||||||||||||||
Sbjct: 83 tgccaaaggagatttgcccc 102
>53709_ptc-miRf11887-akr:pmrd
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 18 atttgccaaaggagatttgc 37
||||||||||||||||||||
Sbjct: 65 atttgccaaaggagatttgc 84
>51757_ptc-miR399k:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 18 atttgccaaaggagatttgc 37
||||||||||||||||||||
Sbjct: 63 atttgccaaaggagatttgc 82
