miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46601_miR444:micropc
Length = 151
Score = 222 bits (112), Expect = 4e-59
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 99
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
>45144_miR444:micropc
Length = 151
Score = 222 bits (112), Expect = 4e-59
Identities = 112/112 (100%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 99
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
>46182_miR444:micropc
Length = 144
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 97
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
>44855_miR444:micropc
Length = 144
Score = 212 bits (107), Expect = 4e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 97
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 144
>45055_miR444:micropc
Length = 95
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 71
Query: 61 catacttgtggctttcttgcaagt 84
||||||||||||||||||||||||
Sbjct: 72 catacttgtggctttcttgcaagt 95
>46094_miR444:micropc
Length = 151
Score = 159 bits (80), Expect = 5e-40
Identities = 104/112 (92%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
|||| ||||||||||||| |||||| ||||| |||| |||||||||||||||| |||||
Sbjct: 40 aggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaatagaagatcac 99
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 112
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 100 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgc 151
>45904_miR444:micropc
Length = 141
Score = 149 bits (75), Expect = 5e-37
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
|||| ||||||||||||| |||||| ||||| |||| |||||||||||||||| |||||
Sbjct: 35 aggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaatagaagatcac 94
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 95 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 141
>46197_miR444:micropc
Length = 95
Score = 111 bits (56), Expect = 1e-25
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 1 aggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaatagaacatcac 60
|||| ||||||||||||| |||||| ||||| |||| |||||||||||||||| |||||
Sbjct: 12 aggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaatagaagatcac 71
Query: 61 catacttgtggctttcttgcaagt 84
||||||||||||||||||||||||
Sbjct: 72 catacttgtggctttcttgcaagt 95
>45665_miR444:micropc
Length = 111
Score = 91.7 bits (46), Expect = 1e-19
Identities = 49/50 (98%)
Strand = Plus / Plus
Query: 63 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 112
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 62 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttg 108
||||| ||||||||||||| |||||||| ||||||| |||||
Sbjct: 47 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttg 5
>46669_miR444:micropc
Length = 136
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 59 accatacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 88 accatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 65 cttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 43 cttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>46544_miR444:micropc
Length = 136
Score = 81.8 bits (41), Expect = 1e-16
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 59 accatacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 88 accatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 46.1 bits (23), Expect = 6e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 65 cttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 43 cttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>45334_miR444:micropc
Length = 101
Score = 81.8 bits (41), Expect = 1e-16
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 63 tacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 57 tacttgtggctttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 66 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||| ||||||||||||| |||||||| ||||||| ||||
Sbjct: 42 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgctt 1
>45742_miR444:micropc
Length = 103
Score = 69.9 bits (35), Expect = 4e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 66 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 42 ttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>45712_miR444:micropc
Length = 103
Score = 69.9 bits (35), Expect = 4e-13
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 66 ttgtggctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||| ||||||||||||| ||||||| |||||||| ||||
Sbjct: 42 ttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>46185_miR444:micropc
Length = 108
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
|||||||||||| |||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgctgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttg 108
||||||||||| ||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>44872_miR444:micropc
Length = 106
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 112
|||||||||||| |||||||||||| ||||||||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgtctcaagcttgctgc 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttg 108
||||||||||| ||||||||||||||| ||||||
Sbjct: 40 tttcttgcaagatatgcagttgctgcctctagcttg 5
>45828_miR444:micropc
Length = 114
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
|||||||||||| ||||||||| || |||||||||||||||
Sbjct: 74 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttg 108
||||||||||| |||||||||||||| ||||||||
Sbjct: 41 tttcttgcaagatgtgcagttgctgccacaagcttg 6
>45451_miR444:micropc
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
|||||||||||| ||||||||| || |||||||||||||||
Sbjct: 70 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 41 tttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45238_miR444:micropc
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
|||||||||||| ||||||||| || |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttg 108
||||||||||| ||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>45168_miR444:micropc
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
|||||||||||| ||||||||| || |||||||||||||||
Sbjct: 70 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
||||||||||| ||||||||||||||| |||||||||||
Sbjct: 41 tttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>46412_miR444:micropc
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 72 ctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||||||||||| |||||||||||| |||||||||
Sbjct: 36 ctttcttgcaagttgtgcagttgctgtctcaagctt 1
>45976_miR444:micropc
Length = 133
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 72 ctttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||||||||||| ||||||||| ||||||||||||
Sbjct: 98 ctttcttgcaagttgtgcagttgttgcctcaagctt 133
>45562_miR444:micropc
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| |||||||||||| |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgctgtctcaagctt 96
>46519_miR444:micropc
Length = 59
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 accatacttgtggctttcttgcaagt 84
||||||||||||||||||||||||||
Sbjct: 32 accatacttgtggctttcttgcaagt 57
>45278_miR444:micropc
Length = 59
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 59 accatacttgtggctttcttgcaagt 84
||||||||||||||||||||||||||
Sbjct: 32 accatacttgtggctttcttgcaagt 57
>45131_miR444:micropc
Length = 108
Score = 52.0 bits (26), Expect = 9e-08
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgcc 113
||||||||| || ||||||||| || |||||||||||||||
Sbjct: 68 tttcttgcangttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagcttg 108
||||||||||| ||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>46570_miR444:micropc
Length = 173
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 catacttgtggctttcttgcaagt 84
||||||||||||||||||||||||
Sbjct: 148 catacttgtggctttcttgcaagt 171
>46299_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 72 ctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||| |||||| |||||||||||| |||||||||
Sbjct: 68 ctttctcgcaagttgtgcagttgctgtctcaagctt 103
>45960_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 72 ctttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||| |||||| |||||||||||| |||||||||
Sbjct: 68 ctttctcgcaagttgtgcagttgctgtctcaagctt 103
>45226_miR444:micropc
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 61 catacttgtggctttcttgcaagt 84
||||||||||||||||||||||||
Sbjct: 35 catacttgtggctttcttgcaagt 58
>46476_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>46210_miR444:micropc
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
||||||||||| |||||||||||||| |||||||
Sbjct: 35 tttcttgcaagatgtgcagttgctgccacaagctt 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagctt 102
>45734_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>45697_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>45175_miR444:micropc
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgttgtctcaagctt 1
>45135_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
>45024_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
|||||||||||| ||||||||| || |||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgttgtctcaagctt 1
>45525_miR444:micropc
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 73 tttcttgcaagtcgtgcagttgctgcctcaagct 106
|||||||||||| ||||||||| || ||||||||
Sbjct: 34 tttcttgcaagttgtgcagttgttgtctcaagct 1
>45001_miR444:micropc
Length = 57
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 tacttgtggctttcttgcaagt 84
||||||||||||||||||||||
Sbjct: 34 tacttgtggctttcttgcaagt 55
>46635_miR444:micropc
Length = 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 61 catacttgtggctttcttgcaagt 84
||||||||||| ||||||||||||
Sbjct: 34 catacttgtggttttcttgcaagt 57
