miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 45 tagtgtgaaaaacattcttatattatgggacggagg 80
          |||||| |||||||||||||||||||| ||||||||
Sbjct: 59 tagtgtcaaaaacattcttatattatgagacggagg 94



 Score = 52.0 bits (26), Expect = 6e-08
 Identities = 68/80 (85%), Gaps = 4/80 (5%)
 Strand = Plus / Minus

                                                                      
Query: 2  tactccctccttcccata-tataagagtgtttttaatactacactagtgtgaaaaacatt 60
          |||||||||| || |||| ||||||| ||||||| | ||||||||   || |||||  ||
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacact---gtcaaaaatgtt 43

                              
Query: 61 cttatattatgggacggagg 80
          ||||||||||||||||||||
Sbjct: 42 cttatattatgggacggagg 23




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 60 tcttatattatgggacggagg 80
          |||||||||||||||||||||
Sbjct: 21 tcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  cttatattatgggacggagg 80
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 61 cttatattatgggacggagg 80
          ||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagg 14




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 61 cttatattatgggacggagg 80
          ||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagg 14




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 61 cttatattatgggacggagg 80
          ||||||||||||||||||||
Sbjct: 34 cttatattatgggacggagg 15



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  cttatattatgggacggagg 80
           ||||||||||||||||||||
Sbjct: 89  cttatattatgggacggagg 108




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 61 cttatattatgggacggagg 80
          ||||||||||||||||||||
Sbjct: 73 cttatattatgggacggagg 92




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 61 cttatattatgggacggagg 80
          ||||||||||||||||||||
Sbjct: 31 cttatattatgggacggagg 12



 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  cttatattatgggacggagg 80
           ||||||||||||||||||||
Sbjct: 97  cttatattatgggacggagg 116




>49071_osa-miR818e:pmrd
          Length = 225

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  cttatattatgggacggagg 80
           ||||||||||||||||||||
Sbjct: 206 cttatattatgggacggagg 225




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 40.1 bits (20), Expect = 2e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  cttatattatgggacggagg 80
           ||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagg 122