miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 142/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat-tgattta 70
|||||||||||||||| ||||||||||||||| ||||||||||||||||||| | | |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| |||||||| |||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
Score = 139 bits (70), Expect = 1e-32
Identities = 128/146 (87%), Gaps = 1/146 (0%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgata 61
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
|||||||||||||| | |||||| | ||||||||||| ||| ||||||||||| | |
Sbjct: 62 ttaatgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaa 121
Query: 128 atgctagaatgacttacgttgtgaaa 153
||||||||||||||||| ||||||||
Sbjct: 122 atgctagaatgacttacattgtgaaa 147
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 145/158 (91%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-t 69
||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtagca 167
| ||||||||||||| |||||||| ||||||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagtagca 161
Score = 125 bits (63), Expect = 2e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| | ||||||||||||||| | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttatattgtgaaa 16
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 198 bits (100), Expect = 2e-50
Identities = 143/156 (91%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||| | ||||||| |||||||||||| | ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||||| |||||||| ||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagtag 159
Score = 133 bits (67), Expect = 9e-31
Identities = 125/143 (87%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| |||| |||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||| |||||||||| ||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 142/155 (91%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||| | ||||||| |||||||||||| || |||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
||| |||||||||| |||||||| ||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagtag 4
Score = 141 bits (71), Expect = 4e-33
Identities = 126/143 (88%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||| | ||||| | ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 131 ctagaatgacttacgttgtgaaa 153
||| ||||||||| ||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaa 147
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 142/155 (91%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 124 actagaatgacttacattgtgaaacggagggagta 158
Score = 149 bits (75), Expect = 1e-35
Identities = 127/143 (88%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| | ||||| ||||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| |||||||||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt-a 70
|||| ||||||||||| ||||||||||||||| | |||| |||||||||||||||||| |
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| |||||||| |||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
Score = 153 bits (77), Expect = 1e-36
Identities = 138/157 (87%), Gaps = 1/157 (0%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgata 61
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
|||||||||||||| | |||||| | ||||||||||| || ||||||||||||||| |
Sbjct: 62 ttaatgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaa 121
Query: 128 atgctagaatgacttacgttgtgaaaaagagggagta 164
|| |||||||||||||| |||||||| |||||||||
Sbjct: 122 atactagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 141/154 (91%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||| ||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 159 bits (80), Expect = 2e-38
Identities = 129/144 (89%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||||||||||| |||||| || |||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||| | | |||||| | ||||||||||| |||||||||||||||||||| |||
Sbjct: 64 aatgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaat 123
Query: 130 gctagaatgacttacgttgtgaaa 153
||||||||||||||| ||||||||
Sbjct: 124 gctagaatgacttacattgtgaaa 147
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 192 bits (97), Expect = 1e-48
Identities = 143/157 (91%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagca 167
|||||||||||||| |||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtagca 2
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| |||||||||| |||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | | ||||||||| || |||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| |||||||| |||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 132/143 (92%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 131 ctagaatgacttacgttgtgaaa 153
||||||||||||| ||||||||
Sbjct: 125 ttagaatgacttacattgtgaaa 147
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| |||| | |||||| | ||||||||||| |||||||||||||||||||| ||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 141/156 (90%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||||||| || ||| ||||||||||| |||||| |||||||||||||||| ||
Sbjct: 159 gtactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatt 100
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||| |||||||||||||||||||||||| |||| |||||| |||||||| |||
Sbjct: 99 aatgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaat 40
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||||| |||||||| ||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtag 4
Score = 123 bits (62), Expect = 9e-28
Identities = 132/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| |||||| |||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | | ||||||||| || ||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| ||||| || |||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 180 bits (91), Expect = 4e-45
Identities = 131/143 (91%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||| ||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
| | |||||||||| ||||||||
Sbjct: 38 caaaaatgacttacattgtgaaa 16
Score = 178 bits (90), Expect = 2e-44
Identities = 142/158 (89%), Gaps = 1/158 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||| | |||||| | ||||||||||| || ||||||||||||||||| |||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtagca 167
||||||||||||||| |||||| | ||||||||||||
Sbjct: 124 gctagaatgacttacattgtgatacggagggagtagca 161
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 180 bits (91), Expect = 4e-45
Identities = 144/160 (90%), Gaps = 5/160 (3%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat----tga 66
||||||||||||||||| ||||||||||||||| ||||||| || ||||||| |||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtga 63
Query: 67 t-ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggg 125
| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 64 tgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggg 123
Query: 126 gaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||||| |||||||| ||||||||||
Sbjct: 124 aaatgctagaatgacttacattgtgaaacggagggagtag 163
Score = 123 bits (62), Expect = 9e-28
Identities = 127/147 (86%), Gaps = 5/147 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| |||||||||| |||| |||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatca----atatgaatgtgggg 126
||||||||||| | |||||| | ||||||||||| ||||||| ||||||| || |
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 178 bits (90), Expect = 2e-44
Identities = 140/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||| | ||| |||||| ||||||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
Score = 163 bits (82), Expect = 1e-39
Identities = 132/146 (90%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 160 tagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 101
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
|||||||||||| | | || ||| || |||||||||| |||||||||||||||||||| |
Sbjct: 100 ttaatgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaa 42
Query: 128 atgctagaatgacttacgttgtgaaa 153
||||||||||||||||| ||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 178 bits (90), Expect = 2e-44
Identities = 106/110 (96%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 34 aagtcattcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatat 92
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaatgactt 142
|||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 131 bits (66), Expect = 3e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 34 aagtcattcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatat 92
|||||||||| ||||||| ||||||||||||||| |||||||||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaatgactt 142
||||||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 140/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||||||||||| ||||||||||| | ||||||||| |||||||| |||
Sbjct: 64 aatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtag 165
||| ||||||||| |||||||| ||||||||||
Sbjct: 124 tctaaaatgacttagattgtgaaacggagggagtag 159
Score = 133 bits (67), Expect = 9e-31
Identities = 125/143 (87%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||| ||||||||| | | ||||| |||||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| ||| |||||||||||||||| ||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 130/143 (90%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 131 ctagaatgacttacgttgtgaaa 153
| ||||||||||| || |||||
Sbjct: 125 gtggaatgacttacattatgaaa 147
Score = 157 bits (79), Expect = 6e-38
Identities = 131/147 (89%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 19 tccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-taatgaatc 77
|||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 151 tccgtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatc 92
Query: 78 tagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaat 137
|||| | |||||| | ||||||||||| |||| ||||||||||||||| |||||||||||
Sbjct: 91 tagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaat 32
Query: 138 gacttacgttgtgaaaaagagggagta 164
||||||| |||||||| |||||||||
Sbjct: 31 gacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 133/147 (90%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 19 tccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatgaatc 77
||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatc 71
Query: 78 tagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaat 137
||||||||||||||||||||||||||| || ||||| |||||| | | |||||||||||
Sbjct: 72 tagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaat 131
Query: 138 gacttacgttgtgaaaaagagggagta 164
||||||| |||||||| |||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 125/143 (87%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| |||||||||||||||||| | ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||||||||||||| ||||||||
Sbjct: 38 gtagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||||| ||||| | || |||||||| ||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||| | ||||||||||||||||||||| ||||| |||||||||||| | |||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||| |||||||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 149 bits (75), Expect = 1e-35
Identities = 127/143 (88%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||||||||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| |||||||||| |||||| |||||||| |||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| || |||||||||| | ||||||| |||||| |||||||| ||
Sbjct: 159 gtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtt 100
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||
Sbjct: 99 aatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaat 40
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|| | |||||||||| |||||||| |||||||||
Sbjct: 39 gcaaaaatgacttactttgtgaaacggagggagta 5
Score = 133 bits (67), Expect = 9e-31
Identities = 125/143 (87%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| || |||||||||| ||||||||| |||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| | | ||||||||||| ||||||||||| |||||||| ||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 131 ctagaatgacttacgttgtgaaa 153
||| |||||||||| ||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaa 147
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| | |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||||||||| ||||||| |||||| |||||||||||||||| || |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||| | | ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| |||| | ||||| | ||||||||||| ||||||||||||||| | || ||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 167 bits (84), Expect = 6e-41
Identities = 139/155 (89%), Gaps = 3/155 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||| |||||||| |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|| |||||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|| ||||||||||| |||||||| ||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagtag 4
Score = 129 bits (65), Expect = 1e-29
Identities = 135/156 (86%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||||||||| ||||||| || |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | | |||||| || ||||||||||| ||||| | ||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagc 166
|||||||||||||| |||||||| |||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagtagc 158
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 139/156 (89%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| |||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| ||||||||||||||||||||| | |||||||||| ||||| | ||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagc 166
||| |||||||||| |||||||| |||||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagtagc 160
Score = 141 bits (71), Expect = 4e-33
Identities = 126/143 (88%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||||||||||||| | ||||||||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| |||||||||||| || || | |||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 167 bits (84), Expect = 6e-41
Identities = 139/155 (89%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtta 62
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|| |||||| |||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|| ||||||||||| |||||||| ||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagtag 157
Score = 129 bits (65), Expect = 1e-29
Identities = 135/156 (86%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||||||||| ||||||| || |||||||||||| |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | | |||||| || ||||||||||| ||||| | ||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagc 166
|||||||||||||| |||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtagc 3
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| |||||| ||||||| ||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||| ||||||||||||||||||||||||||||| | ||||||||||||| | | ||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||| |||||||| ||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtag 159
Score = 117 bits (59), Expect = 5e-26
Identities = 123/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||| ||||||||||| |||||| | |||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | |||||| |||| |||||||||| |||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||| | |||||| |||||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|| ||| ||| || |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| |||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtag 159
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||| ||| || || || ||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||| |||||||||| |||||||| |||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 165 bits (83), Expect = 3e-40
Identities = 139/155 (89%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||||| |||||| ||||||||||| ||||| ||||| ||| |||| ||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||| |||||||| ||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagtag 158
Score = 117 bits (59), Expect = 5e-26
Identities = 124/143 (86%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| || ||| ||||| || |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| |||| | | ||||||||||| | |||||||||||||||| | ||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||| ||||
Sbjct: 38 ctagaatgacttacattgcgaaa 16
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| || | ||||||||||||||| |||||| |||||||| | || ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| || ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtag 4
Score = 117 bits (59), Expect = 5e-26
Identities = 123/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| ||||| | | |||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | | | |||| ||||||||||| |||||| ||||||||||| | | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| || |||||
Sbjct: 125 ctagaatgacttacattatgaaa 147
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 163 bits (82), Expect = 1e-39
Identities = 104/110 (94%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 34 aagtcattcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatat 92
|||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaatgactt 142
|||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 131 bits (66), Expect = 3e-30
Identities = 100/110 (90%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 34 aagtcattcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatat 92
|||||||||| ||||||| ||||||||||||||| |||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaatgactt 142
| ||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||| | ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| || | ||| ||||||||||| |||||| |||||||| | || ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| || ||||| ||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtag 159
Score = 125 bits (63), Expect = 2e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| ||||| | | |||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| | | |||| ||||||||||| |||||| ||||||||||| | | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| || |||||
Sbjct: 38 ctagaatgacttacattatgaaa 16
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 137/155 (88%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| | ||||||||||| | |||||||||||||||||| ||| ||
Sbjct: 4 gtactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||| | ||||||| | |||||||||||||||| ||||||||||||| |||
Sbjct: 64 aatgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||| |||||||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| ||| ||||| |||||||||||||| |||||| ||||||||||| | ||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|| |||||||||| ||||||| |||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 157 bits (79), Expect = 6e-38
Identities = 137/154 (88%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||| || ||||||||||||||| |||||| |||||||||||||| |||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| |||| | ||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| ||||| || |||||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
Score = 147 bits (74), Expect = 6e-35
Identities = 126/141 (89%), Gaps = 3/141 (2%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||||||| || ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 157 gtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 98
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||| | |||||||||||| |||||| ||||||||||||||||| | |||
Sbjct: 97 aatgaatctagaca--tatatatgtctacattcattaacatcaatatgaatgtagaaaat 40
Query: 130 gctagaatgacttacgttgtg 150
||||||||||||||| |||||
Sbjct: 39 gctagaatgacttacattgtg 19
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||||| | ||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| |||||||| ||||||||||| || ||||||||||||||||| ||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| |||||||| |||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
Score = 143 bits (72), Expect = 9e-34
Identities = 127/144 (88%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 159 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 100
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||||| |||||| | ||||||||||| ||||| ||||||||||||| ||
Sbjct: 99 aatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaa 40
Query: 130 gctagaatgacttacgttgtgaaa 153
| |||||||||||| ||||||||
Sbjct: 39 gttagaatgacttatattgtgaaa 16
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 155 bits (78), Expect = 2e-37
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||| | ||||||||| ||||| | |||| ||||||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| |||||||| |||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 115 bits (58), Expect = 2e-25
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| || |||||||||||||| |||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgt-gggaaaa 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||| |||||| |||| ||| |||||||||
Sbjct: 38 ctagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||| | ||||||| |||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| |||| |||||||| |||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||| |||| |||||| |||||| ||||||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| ||||| |||||||||||||| ||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||| ||||||||| ||||||||
Sbjct: 38 ctacaatgacttatattgtgaaa 16
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 153 bits (77), Expect = 1e-36
Identities = 137/156 (87%), Gaps = 7/156 (4%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgct 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||| |||||||||||||||||| | ||||||||||||||| || |||
Sbjct: 64 aatgaatctag------atatatgtctagattcattagcatcaatatgaatgtaggaaat 117
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| |||||||| ||||||||||
Sbjct: 118 gctagaatgacttatattgtgaaacggagggagtag 153
Score = 119 bits (60), Expect = 1e-26
Identities = 123/143 (86%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| |||||||||| | |||||||||||||||||| ||||
Sbjct: 92 atgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 123/138 (89%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt-aatgaa 75
||||||||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 76 tctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctaga 135
|||||| | |||| |||||||||||||| | | |||||||||||||| | ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 136 atgacttacgttgtgaaa 153
||||||||| ||||||||
Sbjct: 33 atgacttacattgtgaaa 16
Score = 145 bits (73), Expect = 2e-34
Identities = 132/151 (87%), Gaps = 1/151 (0%)
Strand = Plus / Plus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatattg-atttaatgaa 75
||||||||||| ||||||||||||||| |||| |||||||||||||||| | | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 76 tctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctaga 135
|||||| | | |||||||||||||||||| ||||||||||||||||| | |||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 136 atgacttacgttgtgaaaaagagggagtagc 166
||||||||| |||||||| |||||| ||||
Sbjct: 130 atgacttacattgtgaaacggagggattagc 160
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 149 bits (75), Expect = 1e-35
Identities = 135/155 (87%), Gaps = 10/155 (6%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||||||||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacat---------tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| |||||||| ||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagtag 150
Score = 149 bits (75), Expect = 1e-35
Identities = 126/143 (88%), Gaps = 10/143 (6%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 89 atgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 130/147 (88%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 19 tccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatgaatc 77
|||||| |||||||||||||||||| |||||| ||||||||||| | | ||||||||||
Sbjct: 12 tccgttccataatgtaagtcattctaacatttcccacattcatataggtgttaatgaatc 71
Query: 78 tagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaat 137
|||||| ||||| |||||||||||||| |||| | |||||||||||| |||||||||||
Sbjct: 72 tagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatgctagaat 131
Query: 138 gacttacgttgtgaaaaagagggagta 164
||||||| |||||||| |||||||||
Sbjct: 132 gacttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 9e-28
Identities = 117/134 (87%), Gaps = 1/134 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||||||| ||||||||||| |||| | ||||||||||||| ||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttac 144
|||||||||||||
Sbjct: 38 ttagaatgacttac 25
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 136/155 (87%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-t 69
||||||||||||||||| |||||| |||||||| ||||| ||||||||||| ||| |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||| | ||||||| |||||||||||| ||||||||||||||||||| |||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||| |||||||| |||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 141 bits (71), Expect = 4e-33
Identities = 126/143 (88%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| ||||||||| |||||||||| | |||| |||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||| ||| ||||||||
Sbjct: 38 ctagaatgacatacattgtgaaa 16
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||||| | ||||| ||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| |||||| | || | ||||||||||||| |||||| |||||||| |||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| || ||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 124/143 (86%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| ||||| | || |||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | | || ||| |||| |||||| |||||| ||||| ||||||| ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| || |||||
Sbjct: 38 ctagaatgacttacattatgaaa 16
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||||||||||||||||||| ||| |||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| || ||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| | |||||||||| ||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| || ||||| |||||||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||||||||||||||||||| | |||| |||||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| || ||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| | |||| ||||| ||||| |||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| || ||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 134/153 (87%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| ||||||| | |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||| ||||||||||||||||||||||| ||| || ||||||||||||| ||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagt 163
|||||||||||||| || ||||| ||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
Score = 113 bits (57), Expect = 8e-25
Identities = 127/149 (85%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatattga-tttaatgaa 75
||||||||||||||||||||||||||| ||||||| ||||||||||| || ||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 76 tctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctaga 135
|||||| | |||||| | | |||||||| ||| || |||||||| | || |||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 136 atgacttacgttgtgaaaaagagggagta 164
||||||||| || ||||| |||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 145 bits (73), Expect = 2e-34
Identities = 128/144 (88%), Gaps = 3/144 (2%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||| ||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 64 aatgaatctagatag--gcatatgtccagattcattaacatcaatataaacgtgggaaat 121
Query: 130 gctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 122 gctagaatgacttatattgtgaaa 145
Score = 133 bits (67), Expect = 9e-31
Identities = 134/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||||| ||||||| ||| || |||||||| |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||| || | || ||| |||||||||| |||||||||||||||||||| ||||
Sbjct: 96 atgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 143 bits (72), Expect = 9e-34
Identities = 126/143 (88%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||| | |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| || |||||||||||||| ||||||||||||||||||| ||||
Sbjct: 92 atgaatctagacag------atgtctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||||||||||||| ||||||||
Sbjct: 38 atagaatgacttacattgtgaaa 16
Score = 135 bits (68), Expect = 2e-31
Identities = 134/155 (86%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt-a 70
|||||||||||||||| ||||||||||||||| |||||| ||||||||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | | ||||||||||||| ||||||||||||||||||| ||||
Sbjct: 65 atgaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| || ||||| ||||||||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagtag 153
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 137/155 (88%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcac-attcatattgat-tt 69
|||| ||||||||||| ||||||||||||||| | |||| |||| | |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattt-tcactagaaatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| ||||| |||||||| |||||||||
Sbjct: 124 actagaatgtcttacattgtgaaacggagggagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 132/156 (84%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| |||||| | ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| | ||||||||||| ||||||||||| | | |||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaata 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagc 166
|||||||||||||| |||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtagc 3
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 126/143 (88%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||||||||||||||| | |||| ||||| |||| |||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||||||||||||||||| |||||| ||||||||||||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||| ||||||| || |||||
Sbjct: 38 ctagaaagacttacattatgaaa 16
Score = 133 bits (67), Expect = 9e-31
Identities = 134/155 (86%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||||||||||||||||| |||| | ||| | ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| ||||||||||||| |||||| |||||||| || | ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||| | ||||| || ||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagtag 159
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 139 bits (70), Expect = 1e-32
Identities = 133/155 (85%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| ||||||| ||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| |||||||| ||||||||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagtag 147
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/156 (82%), Gaps = 13/156 (8%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||| ||||| | ||||||||| ||||||||||||||||||| ||||
Sbjct: 86 atgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagc 166
|||||||||||||| || ||||| |||| ||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagtagc 3
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 134/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||||| | ||||| |||| ||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| |||||| | || | ||||||||||||| |||||| |||||||||| || ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| || ||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 125/145 (86%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||||||||||||||||||| ||||| | |||||||||| ||| |
Sbjct: 3 agtactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgt 62
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||||||||| | | || ||| |||| |||||| |||||| |||| ||||||| ||
Sbjct: 63 taatgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaa 122
Query: 129 tgctagaatgacttacgttgtgaaa 153
|||||||||||||||| || |||||
Sbjct: 123 tgctagaatgacttacattatgaaa 147
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 137 bits (69), Expect = 6e-32
Identities = 127/144 (88%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||||||||||| |||||| ||||||||||| | || ||
Sbjct: 157 gtactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtt 98
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||||| |||||||||||| |||||| ||||| | |||||||||||| |||
Sbjct: 97 aatgaatctagata--tatatatgtctaaattcattaacatgagtatgaatgtgggaaat 40
Query: 130 gctagaatgacttacgttgtgaaa 153
|| ||||||||||| ||||||||
Sbjct: 39 gccagaatgacttatattgtgaaa 16
Score = 125 bits (63), Expect = 2e-28
Identities = 133/154 (86%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||||| ||||||| |||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| |||| | |||||||| |||||||||| ||||| | |||||||||| ||||
Sbjct: 65 atgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 133 bits (67), Expect = 9e-31
Identities = 132/156 (84%), Gaps = 12/156 (7%)
Strand = Plus / Minus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt 68
||||||||||||||||| | ||||||||||||||| ||||||| ||||||||||
Sbjct: 148 tagtacttcctccgttttacaatgtaagtcattctagcatttcccacattcata------ 95
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
|||||||||||||||||||||||||||||| ||||||||||||||| || | ||
Sbjct: 94 ------atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaa 41
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||| || ||||| |||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 84/92 (91%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||
Sbjct: 4 gtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagatt 101
|||||||||||| | |||||| | ||||||||
Sbjct: 64 aatgaatctagacatatatatctatctagatt 95
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| || || | || || ||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| | | |||||| ||||||||| | |||| ||||||||||||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||| |||||||||| || ||||| |||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 124/146 (84%), Gaps = 1/146 (0%)
Strand = Plus / Minus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||||||||||||||||| | ||||| | ||||||||||| |||
Sbjct: 161 tagtactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatg 102
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
||||||||||| | | || | ||| ||||||||||| |||||| ||||| || |||| |
Sbjct: 101 gtaatgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggta 42
Query: 128 atgctagaatgacttacgttgtgaaa 153
| ||||||||||||||| || |||||
Sbjct: 41 aggctagaatgacttacattatgaaa 16
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 133/154 (86%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||||||||||||||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| | ||||||||||||| |||||| ||||||||||| ||||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||| || | ||||| || ||||| |||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagggagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 125/144 (86%), Gaps = 1/144 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||||||||||||||||||| | || | ||||| ||||||||||||| ||| ||
Sbjct: 4 gtactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||| | | |||||| ||||||||||| |||||| ||||||||||||| |||
Sbjct: 64 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaat 123
Query: 130 gctagaatgacttacgttgtgaaa 153
||||||| | ||||| || |||||
Sbjct: 124 gctagaaagtcttacattatgaaa 147
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 129 bits (65), Expect = 1e-29
Identities = 126/144 (87%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||||||||||||||| |||||||| | |||||| |||||||||||| ||| ||
Sbjct: 157 gtactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtt 98
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||| | |||||||||||| ||||||| |||||| | ||||||||||| |||
Sbjct: 97 aatgaatcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaat 40
Query: 130 gctagaatgacttacgttgtgaaa 153
|||| |||||||||| ||||||||
Sbjct: 39 gctaaaatgacttacattgtgaaa 16
Score = 101 bits (51), Expect = 3e-21
Identities = 130/154 (84%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||| | ||||||| ||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||| || | ||||||||| ||||||||| |||||| ||||||||||| ||||
Sbjct: 65 atgaatcaag--acatatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||| |||||||| | || ||||| |||||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 129 bits (65), Expect = 1e-29
Identities = 134/155 (86%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||||| | ||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
| ||||||||||| || ||||| ||||||||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagtag 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 121/143 (84%), Gaps = 4/143 (2%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||||||||||||||||||||| |||||| ||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||| ||||||| ||||| | ||||||||||| | ||||||||||||||||| |||
Sbjct: 95 atggatctaga---ctatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttatattgtgaaa 16
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 127 bits (64), Expect = 5e-29
Identities = 124/143 (86%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| || ||| ||||||||||||||| |||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||| | |||||||||| |||||||||||| |||||||||||||||||| ||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
Score = 123 bits (62), Expect = 9e-28
Identities = 134/158 (84%), Gaps = 5/158 (3%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt 69
|||||||||||||||||| ||||||||||||||| |||||| |||||||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattg---- 58
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||| ||||||| | || ||| | |||| | |||| ||||||||||||||||||| ||
Sbjct: 59 -atgtatctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaag 117
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtagca 167
||||||||||||||| |||||||| ||||||||||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagtagca 155
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 125/144 (86%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||||||||||||||||||| | || | ||||| ||||||||||||| ||| ||
Sbjct: 159 gtactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtt 100
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||| | | |||||| ||||||||||| |||||| ||||||||||||| |||
Sbjct: 99 aatgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaat 40
Query: 130 gctagaatgacttacgttgtgaaa 153
||||||| | ||||| || |||||
Sbjct: 39 gctagaaagtcttacattatgaaa 16
Score = 123 bits (62), Expect = 9e-28
Identities = 132/154 (85%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||||||||||||||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| | ||||||||||||| |||||| ||||||||||| | ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||| || | ||||| || ||||| |||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 125 bits (63), Expect = 2e-28
Identities = 125/146 (85%), Gaps = 11/146 (7%)
Strand = Plus / Minus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| || |||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 151 tagtactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 92
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
||||||||| |||||||||||||||||| ||||| ||||| |||||||| |
Sbjct: 91 ttaatgaat----------atatatgtctagattcattaacattaatataaatgtgggaa 42
Query: 128 atgctagaatgacttacgttgtgaaa 153
||||||||||||||||| ||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaa 16
Score = 119 bits (60), Expect = 1e-26
Identities = 122/143 (85%), Gaps = 11/143 (7%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| |||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| |||||| |||||||||||||||||||| ||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 115 ctagaatgacttacattgtgaaa 137
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 123 bits (62), Expect = 9e-28
Identities = 133/158 (84%), Gaps = 14/158 (8%)
Strand = Plus / Plus
Query: 8 gtagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 1 gtagaacttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgat 60
Query: 68 -ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggg 126
||||| |||||| |||||||||||| ||||||||||||||| |||
Sbjct: 61 gttaataaatcta-------------gtctagattcattaacatcaatatgaatatggaa 107
Query: 127 aatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||||| |||||||| |||||||||
Sbjct: 108 aatgctagaatgacttacattgtgaaacggagggagta 145
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| || |||||||||||| |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 85 atgaatctaga 75
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 119 bits (60), Expect = 1e-26
Identities = 123/143 (86%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||| | |||||||||| |||||||||||| |||||||||||||| ||| ||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 119 ctagaatgacttacattgtgaaa 141
Score = 113 bits (57), Expect = 8e-25
Identities = 132/157 (84%), Gaps = 5/157 (3%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattta 70
||||||||||||||||| ||||||||||||||| |||||| || |||||||||||| ||
Sbjct: 153 gtacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgta 94
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| | || ||| | |||| | |||| |||||| |||||||||||| ||||
Sbjct: 93 -----tctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagca 167
|||||||||||||| |||||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtagca 2
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 119 bits (60), Expect = 1e-26
Identities = 133/155 (85%), Gaps = 8/155 (5%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt 69
||||||||||| |||||| |||||||||| |||| ||||||| |||||| || ||
Sbjct: 3 agtacttcctctgtttcacaatgtaagtc-ttctagcatttcccacattgatgtt----- 56
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||
Sbjct: 57 aatgaatctagatagatat--atgtctagattcattaacatcaatatgaatatgggaaat 114
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|||| ||||||||| |||||||| |||||||||
Sbjct: 115 gctaaaatgacttatattgtgaaacggagggagta 149
Score = 87.7 bits (44), Expect = 5e-17
Identities = 129/154 (83%), Gaps = 10/154 (6%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||| ||||||||| | ||||||| || |||||||||||| |||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||| | |||||| | ||||||||||| |||||| |||||||| ||||
Sbjct: 89 atgaatctag--acatatatctatctagattcattaacatc------aatgtgggaaatg 38
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| ||||||| |||||||| ||||| ||||
Sbjct: 37 ctagaa-gacttacattgtgaaacagaggaagta 5
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 132/155 (85%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| |||||||||| ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||| || |||||||||||||||||| |||||| | |||||||| ||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
||| |||||||||| || ||||| |||||||||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagtag 159
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| |||||||||||||||||||| | |||||| ||||||||| | ||| |||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||| | ||||| || |||||||| |||||| |||| ||| || | ||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| || ||||| |||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 115 bits (58), Expect = 2e-25
Identities = 132/155 (85%), Gaps = 10/155 (6%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| | || | ||| ||||| |||||||||||||||||| | ||||
Sbjct: 65 atgaatctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaatg 115
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||| |||||||| ||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaaccgagggagtag 150
Score = 87.7 bits (44), Expect = 5e-17
Identities = 130/159 (81%), Gaps = 16/159 (10%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| |||||| ||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 71 atgaatctagatagatatatatgtc---tagattcatcaacatcaatatgaatgtgggga 127
||||| | |||||| ||||||||| ||||||||||||||||||| |
Sbjct: 89 atgaaac------------tatgtcacatagattcattaacatcaatatgaatgtggaaa 42
Query: 128 atgctagaatgacttacgttgtgaaaaagagggagtagc 166
||||||||||||||||| || ||||| |||| ||||||
Sbjct: 41 atgctagaatgacttacattatgaaacggaggaagtagc 3
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 113 bits (57), Expect = 8e-25
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 71 atgaatctagata 83
|||||||||||||
Sbjct: 55 atgaatctagata 43
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 89 atatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttg 148
|||| ||||||||||| || ||||||||||||||||| |||||||||||||||||| ||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 149 tgaaa 153
|||||
Sbjct: 100 tgaaa 104
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 128 atgctagaatgacttacgttgtgaaaaagagggagtagca 167
||||||||||||||||| |||||||| ||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagtagca 2
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcat 48
|||| ||||||||||| ||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 113 bits (57), Expect = 8e-25
Identities = 73/77 (94%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 130 tagtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatg 71
Query: 68 ttaatgaatctagatag 84
|||||||||||||||||
Sbjct: 70 ttaatgaatctagatag 54
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttc 51
|||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 132/156 (84%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
||||||||||||| || | | ||||||||||| | |||| || |||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| ||||||||||||||||| ||||||||| | ||||||||||||| || | ||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtagc 166
|||||||||||| ||||| || |||||||||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagtagc 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 112/133 (84%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||| || ||| ||||||||||| ||||||||| |||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| | | |||||| | |||| |||||| | ||||||||||||| ||| |||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 131 ctagaatgactta 143
|||||||||||||
Sbjct: 38 ctagaatgactta 26
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 86 tatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacg 145
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 146 ttgtgaaa 153
||||||||
Sbjct: 23 ttgtgaaa 16
Score = 95.6 bits (48), Expect = 2e-19
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 4 gtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 70 aatgaatctaga 81
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 132/155 (85%), Gaps = 3/155 (1%)
Strand = Plus / Plus
Query: 15 ttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatg 73
||||||||||||||||| ||||||||||| ||||| | ||||||||||| ||| ||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 74 aatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgcta 133
||||| | | |||||| || |||||||||| | ||| ||| ||||||||| ||| |||
Sbjct: 68 aatctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 134 gaatgacttacgttgtgaaaaagagggagtagcaa 168
|||||||||| |||||||| |||||||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagtagcaa 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 113/133 (84%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||| ||||||||||| | ||| | ||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||| | ||||||||| |||||||| |||||| ||||||||||||| ||||
Sbjct: 96 atgaatctag--ccacatatatgtccagattcattaacatctatatgaatgtgggcaatg 39
Query: 131 ctagaatgactta 143
|||||||||||||
Sbjct: 38 ctagaatgactta 26
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 109 bits (55), Expect = 1e-23
Identities = 68/71 (95%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||| ||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 87 atatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgt 146
|||| ||||||||||||| |||||||||||||||||| | ||| |||||||||||||| |
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 147 tgtgaaa 153
| |||||
Sbjct: 22 tatgaaa 16
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||| | |||||||||||||||||| || ||||| ||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagtag 131
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | | || ||||| ||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | | |||||| ||||||||||| |||||| || |||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|| || | ||||| |||||||| ||||||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagtag 159
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | || | |||| | |||||||| || ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| |||| | ||||||||||||| |||||| ||||||||||| | ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagtag 165
|||| | | ||||| |||||||| ||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagtag 4
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa
Japonica Group
Length = 146
Score = 109 bits (55), Expect = 1e-23
Identities = 71/75 (94%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatat 62
Query: 69 taatgaatctagata 83
|||||||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| || ||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 154 aagagggagta 164
|||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgtt 147
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 148 gtgaaa 153
||||||
Sbjct: 21 gtgaaa 16
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 70 aatgaatctaga 81
||||||||||||
Sbjct: 64 aatgaatctaga 75
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 130/154 (84%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
||||||||||||||||||||||||| | |||| ||||| | |||||||| || ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||||| | | ||||||||| |||||| ||||||||| ||| ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 93.7 bits (47), Expect = 8e-19
Identities = 120/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | |||| ||||| | | ||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| ||| ||||| ||||||||||||| | |||| || |||||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||| | ||||| || |||||
Sbjct: 38 ctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 73/78 (93%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 71 atgaatctagatagatat 88
||||||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||||||||||||||| |||| ||||||| ||||| || |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||||||||| || |||||||| ||| ||| ||||
Sbjct: 65 atgaatctaga------------tgtagattcattaatatcaatataaatatggaaaatg 112
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 113 ctagaatgacttacattgtgaaacggagggagta 146
Score = 91.7 bits (46), Expect = 3e-18
Identities = 118/143 (82%), Gaps = 13/143 (9%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| || ||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| || |||||||||| |||||||||||||||||| | ||||
Sbjct: 86 atgaatctacat------------ctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 38 ctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||| || ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||| ||||| || |||||| ||| ||||||||||||||||||| ||||
Sbjct: 86 atgtatctatat------------ctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 117/140 (83%), Gaps = 13/140 (9%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||| ||||||||| ||||| ||| |||||||||||||||||||| ||||
Sbjct: 65 atgtatctagata------------tagatacattaacatcaatatgaatgtgggaaatg 112
Query: 131 ctagaatgacttacgttgtg 150
|||||||||||||| |||||
Sbjct: 113 ctagaatgacttacattgtg 132
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 105 bits (53), Expect = 2e-22
Identities = 126/153 (82%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatttaa 71
|||||||||||||||||||||||||||||||| |||||| ||||||||||| |||| | |
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 72 tgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgc 131
|||||||| |||||||| || ||||||| |||||||||||| ||| |
Sbjct: 65 -------------atatatatatctagatttattaacatcactatgaatgtgggaaatac 111
Query: 132 tagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| || ||||| ||||||||||
Sbjct: 112 tagaatgacttacattatgaaacagagggagta 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||| |||||||||||||||||||||| | ||||| |||||||||| |||| ||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 70 aatgaatctagatagatatat 90
||| |||||||||| ||||||
Sbjct: 85 aataaatctagatatatatat 65
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaa 155
||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 156 gagggagta 164
|||||||||
Sbjct: 122 gagggagta 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| |||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 71 atgaatcta 79
|||||||||
Sbjct: 70 atgaatcta 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||
Sbjct: 59 aacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaagta 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||||||| |||||| ||| ||||||||| | |||||| |||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgat 56
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||||||| |||| | |||| | ||| | || |||||||| ||| |
Sbjct: 3 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 62
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||| ||||||| ||| |||||||||||||||| |||||| |||||||||||| ||
Sbjct: 63 taatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaa 122
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagta 164
| ||| || | ||||| |||||||| |||||||||
Sbjct: 123 tcctaaaaagtcttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | || | | ||| ||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | || ||||| ||||| ||||| |||||| |||||||| |||| |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 131 ctagaa 136
||||||
Sbjct: 38 ctagaa 33
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 5 tacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 64
Query: 71 atgaatctagat 82
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 103 bits (52), Expect = 8e-22
Identities = 130/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||| | |||||||||||||| | |||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||| ||| |||||| ||||||||||| | ||||||||| ||||||| |||
Sbjct: 64 aatgaatttag------atatatctctagattcattagcatcaatataaatgtggaaaat 117
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|||| ||||||||| |||||||| |||||||||
Sbjct: 118 gctaaaatgacttatattgtgaaacggagggagta 152
Score = 69.9 bits (35), Expect = 1e-11
Identities = 118/143 (82%), Gaps = 7/143 (4%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||| ||||||||| | |||||| |||||| |||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||| ||||||| |||| |||||| | ||||||| | |||||| | ||||
Sbjct: 92 atgaatctag--agatata----tctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
||| |||||||||| ||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 131/156 (83%), Gaps = 1/156 (0%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||||||| |||| | |||| | ||| | || |||||||| ||| |
Sbjct: 160 agtactccctccgtttcataatataagactttctagtattgcccatattcatatagatgt 101
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||| ||||||| ||| |||||||||||||||| |||||| |||||||||||| ||
Sbjct: 100 taatgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaa 41
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagta 164
| ||| || | ||||| |||||||| |||||||||
Sbjct: 40 tcctaaaaagtcttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | || | | ||| ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | || ||||| ||||| ||||| |||||| |||||||| |||| |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 131 ctagaa 136
||||||
Sbjct: 125 ctagaa 130
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 103 bits (52), Expect = 8e-22
Identities = 68/72 (94%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||||||| || |||||||||||| |||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 71 atgaatctagat 82
||||||||||||
Sbjct: 80 atgaatctagat 69
Score = 93.7 bits (47), Expect = 8e-19
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||| ||||||||||||||| ||||||| || ||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 61
Query: 68 ttaatgaatctagat 82
|||||||||||||||
Sbjct: 62 ttaatgaatctagat 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||||||||||||||| |||| |||||||||||||||||| || |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 101 bits (51), Expect = 3e-21
Identities = 78/86 (90%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
|||||| |||||||||||||| |||||||||| ||| |||||||||||||||||||| |
Sbjct: 35 ttaatggatctagatagatat--atgtctagatccattaacatcaatatgaatgtgggaa 92
Query: 128 atgctagaatgacttacgttgtgaaa 153
||||||||||||||||| || |||||
Sbjct: 93 atgctagaatgacttacattatgaaa 118
Score = 101 bits (51), Expect = 3e-21
Identities = 67/71 (94%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 71 atgaatctaga 81
||| |||||||
Sbjct: 69 atggatctaga 59
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 3e-21
Identities = 130/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-t 69
|||||||||||||||||||||||||| | || | ||||| | ||||||||||| ||| |
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||| |||||| ||| ||| |||||||||||||| | |||| ||||||||||||| |||
Sbjct: 64 aataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
| ||||| | ||||| |||||||| |||||||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggagta 158
Score = 54.0 bits (27), Expect = 7e-07
Identities = 100/123 (81%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | |||| |||| | ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||||| | |||||| || | |||| ||||||||||||| ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 131 cta 133
|||
Sbjct: 38 cta 36
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| | ||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| | | ||| |||||||||||||||| | |||| | |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 5e-14
Identities = 118/143 (82%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| |||||||| | |||| ||||| | || |||||| | ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | || ||| ||| ||||||||| ||||| ||||| ||||||| ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||| | ||||| ||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaa 16
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 99/113 (87%), Gaps = 3/113 (2%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
|||||||||||||||||||||||||||||| |||| ||||| | ||||||||||| |||
Sbjct: 2 tagtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatg 61
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaat 120
||||||||||||| | | | |||||||||||||||| |||||| | ||||||
Sbjct: 62 ttaatgaatctag--acacacatatgtctagattcattaacatctagatgaat 112
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/143 (84%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||||||||||||||| | || | ||||| || | |||||| | ||| |||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||| | ||||||||||||| |||||| ||||||||||||| ||||
Sbjct: 96 atgaatctagaca--tatgtgtgtctagattcattaacatctatatgaatgtgggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||| ||||||| || |||||
Sbjct: 38 ctagaaagacttacattatgaaa 16
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||| ||||||||||||||| ||||| | |||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| | |||||||||| || |||||| | |||| |||||||||||| ||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||| || | | |||||| || ||||||||| | |||| |||||||| | | ||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||| |||||||| |||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 99.6 bits (50), Expect = 1e-20
Identities = 130/156 (83%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat---t 68
|||| ||||||||||| |||||||| | || | ||||| ||||||| ||||| || |
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||||||| | | ||| |||||| ||||||||| |||||| | ||||||||||| ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| | ||||| |||||||| ||||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacagagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 125/156 (80%), Gaps = 3/156 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| |||||| |||||||| | |||| ||||| | ||||||||| | ||| |||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaac--atcaatatgaatgtggggaa 128
||||||||| | | || ||| ||| ||||||||| ||| || ||||| ||||| | ||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacatatatatatgtatgtgagcaa 124
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagta 164
||||| || | ||||| |||||||| |||||||||
Sbjct: 125 tgctaaaaagtcttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 72/78 (92%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 71 atgaatctagatagatat 88
||||||||||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 154 aagagggagta 164
|||||||||
Sbjct: 126 cggagggagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||||||||||||||| ||||||||||||||| ||||||| || ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||| |||| |||||||||||||||||| ||||||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtga 151
||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 152 aaaagagggagta 164
|| |||||||||
Sbjct: 127 aacggagggagta 139
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||| ||||||||||||||| ||||||| || ||||||||||||
Sbjct: 142 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 83
Query: 68 ttaatgaatctaga 81
||||||||||||||
Sbjct: 82 ttaatgaatctaga 69
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 97.6 bits (49), Expect = 5e-20
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 71 atgaatctagata 83
|||||||||||||
Sbjct: 63 atgaatctagata 51
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||||||||||||||||| || |||||||||||||||||| || |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 154 aagagggagtag 165
||||||||||
Sbjct: 113 cggagggagtag 124
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcattt 50
|||||||||||||||| ||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 5e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 71 atgaatcta 79
|||||||||
Sbjct: 66 atgaatcta 58
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaa 155
||||||||| || |||||||||||| || | |||||||||||||||||| || |||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 156 gagggagtagc 166
|||||||||||
Sbjct: 118 gagggagtagc 128
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||||||||||||||| ||| ||||||||||| |||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtagc 166
||||| ||||||| ||||||||||||||||| |||||||| |||| ||||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagtagc 3
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 97.6 bits (49), Expect = 5e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattta 70
||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat--- 60
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||| || | |||||||| || ||||||||||| ||| || | ||||
Sbjct: 61 ---------gatagatagatctatctagatttattaacatcaatataaatatgagaaatg 111
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||| |||||||||
Sbjct: 112 ctagaatgacttacattgtgaaacggagggagta 145
Score = 87.7 bits (44), Expect = 5e-17
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||||||| ||| |||||||| |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 71 atgaatctagatagat 86
|| |||||||||||||
Sbjct: 85 ataaatctagatagat 70
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtga 151
||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 152 aaaagagggagta 164
|| |||||||||
Sbjct: 17 aacggagggagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| ||||||||||| ||||||||||||||| ||||||| || ||||||||||||
Sbjct: 2 tagtactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 61
Query: 68 ttaatgaatctaga 81
||||||||||||||
Sbjct: 62 ttaatgaatctaga 75
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||| ||||||||||| | |||||||| ||| |||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgat 63
Query: 70 aatgaatctagatagatatatatgt 94
|||||||||||||||||||||||||
Sbjct: 64 aatgaatctagatagatatatatgt 88
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttc 51
||||| ||||||||||||||||||||||||| | |||||||
Sbjct: 129 gtactccctccgtttcataatgtaagtcattgtagcatttc 89
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttac 144
|||||| | ||||||||||| | ||||||||| ||| || | ||| |||||||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 145 gttgtgaaa 153
||||||||
Sbjct: 24 attgtgaaa 16
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 76/84 (90%), Gaps = 1/84 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||| | |||||| |||| | ||||||||| |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 71 atgaatctagatagatatatatgt 94
||||||||||||||||||| ||||
Sbjct: 70 atgaatctagatagatataaatgt 47
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||||||||| | ||| ||||||| |||||||||| ||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/147 (82%), Gaps = 15/147 (10%)
Strand = Plus / Plus
Query: 8 gtagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||| ||||||||||| |||||||| |||||| ||||||| |||||||||||||||
Sbjct: 1 gtagtactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgat 60
Query: 68 -ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggg 126
|| |||||| | ||||||||| || ||||||||||||||||||||
Sbjct: 61 gttcatgaattt--------------gtctagatttatgaacatcaatatgaatgtggga 106
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 107 aatgctagaatgacttacattgtgaaa 133
Score = 93.7 bits (47), Expect = 8e-19
Identities = 126/154 (81%), Gaps = 15/154 (9%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|| |||||||| | |||||| |||||||||||||||||||| ||||
Sbjct: 84 ataaatctaga--------------caaattcatgaacatcaatatgaatgtgggaaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| ||||| |||||||| |||||||||
Sbjct: 38 ctagaatggcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattg 65
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 3 agtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattg 58
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||| |||| ||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||| ||||||||||| ||||||||||||||| |||||| || ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| ||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 154 aagagggagtag 165
||||||||||
Sbjct: 15 cggagggagtag 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacatt 58
||||||||||||||||||||| |||||||||| |||||| ||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 86 tatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacg 145
||||||||||||||||||| || || |||||||||||||| ||||||||||||||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 146 ttgtgaaa 153
||||||||
Sbjct: 117 ttgtgaaa 124
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 75 atgaatctaga 65
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||| ||||| ||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 133/160 (83%), Gaps = 1/160 (0%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
||||||||||||||||||||||| ||| | |||| ||||| | ||||||||| | ||| |
Sbjct: 3 agtacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgt 62
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||||||| | | |||||||||||||||||||| |||||| || | | | || ||
Sbjct: 63 taatgaatctaaacacatatatatgtctagattcattaacatctatgggtacataggcaa 122
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagtagcaa 168
|| ||||| | ||||| |||||||| |||||||||||||
Sbjct: 123 tgttagaaagtcttacattgtgaaacggagggagtagcaa 162
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
|||||||||||||| | |||||| ||| ||||||||| |||||| | ||||||||||| |
Sbjct: 101 ttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggta 42
Query: 128 atgctagaa 136
|||||||||
Sbjct: 41 atgctagaa 33
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 89 atatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttg 148
|||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 149 tgaaaaagagggagta 164
||||| |||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||||||| ||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtt 82
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||| |||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 63 aacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 93.7 bits (47), Expect = 8e-19
Identities = 63/67 (94%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaatc 77
|||||||
Sbjct: 65 atgaatc 71
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 98 gattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 87.7 bits (44), Expect = 5e-17
Identities = 63/68 (92%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 142 gtactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtt 83
Query: 70 aatgaatc 77
||||||||
Sbjct: 82 aatgaatc 75
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 93.7 bits (47), Expect = 8e-19
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtga 151
||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 152 aa 153
||
Sbjct: 17 aa 16
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 80
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 105 caacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||||||||| |||||||||||||||||| || ||||| |||||||||
Sbjct: 76 caacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Query: 165 g 165
|
Sbjct: 136 g 136
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaa 155
||||||||| |||||| ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 156 gagggagtagc 166
|||||||||||
Sbjct: 13 gagggagtagc 3
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 71 atgaatcta 79
|||||||||
Sbjct: 65 atgaatcta 73
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtagc 166
||||||||||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtagc 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt 68
|||| ||||||||||| ||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatt 68
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 129/155 (83%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| |||||||| | |||| | | | | || |||||||| ||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||| |||| | |||||||||||||||||| |||||| ||||||||||||| |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | |||| | ||| | ||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| |||||| |||||| |||||| |||||||| |||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 101/115 (87%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt-tctcacattcatattgat-tt 69
||||||||||||||||||||||||| | |||| ||||| ||| |||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtct-acattcatatagatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgg 124
|||||||||||| | |||| | ||| ||||||||| |||||| ||||||||||||
Sbjct: 64 aatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtgg 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 119/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||||||||||||||| | |||| | || ||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| | | | |||||||||||||||||| |||||| |||||||||| | ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||| | ||||| || |||||
Sbjct: 38 ctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 120/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | |||| | ||| | ||| | ||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| ||| ||| |||||||||||||||| |||||| | |||||| |||| ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||| | ||||| ||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaa 16
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| | || |||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | || ||| | | ||||||||| |||||| ||||| | ||||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 91.7 bits (46), Expect = 3e-18
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
|||||||||||||||||||||||||||||| |||| ||||| | ||||||||||| |||
Sbjct: 2 tagtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatg 61
Query: 68 ttaatgaatctaga 81
||||||||||||||
Sbjct: 62 ttaatgaatctaga 75
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgtt 147
||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||| ||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 148 gtgaaa 153
|||||
Sbjct: 21 atgaaa 16
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt 49
|||| |||||||||||||||||||| | |||| |||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||| | |||| | |||| ||||| | |||| |||||| ||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||| ||| | | |||||||||||||||||||| | |||| ||||||||||||| ||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 131 ctagaa 136
||||||
Sbjct: 125 ctagaa 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||||||||||||||||| | |||| | |||| ||||| | ||||||||||| ||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||| ||| ||| ||||| |||||| |||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 131 ctagaa 136
||||||
Sbjct: 38 ctagaa 33
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 128/154 (83%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||| ||||||||||||||| | |||| || || | ||||||||||| || |||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | | |||||||| ||||||||| | ||| ||||||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||| || | ||||| || ||||| |||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaaccgagggagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 119/144 (82%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt- 69
||||| |||| ||||||||||||||| | || | ||||| | ||||||||||| ||| |
Sbjct: 159 gtactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatc 100
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||| | | |||| | ||||||||||||| ||||| ||||||||||||| ||
Sbjct: 99 aatgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaag 40
Query: 130 gctagaatgacttacgttgtgaaa 153
||||||| | ||||| || |||||
Sbjct: 39 gctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 91.7 bits (46), Expect = 3e-18
Identities = 114/137 (83%), Gaps = 16/137 (11%)
Strand = Plus / Minus
Query: 18 ctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatgaat 76
|||||||||| ||||||||||||||| |||||| |||||||||| |||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgttaatgaat 85
Query: 77 ctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
||||||| ||| ||||||||| |||||||||||||||||||| |||| |||||
Sbjct: 84 ctagata--------tgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
Query: 137 tgacttacgttgtgaaa 153
|||||||| ||||||||
Sbjct: 32 tgacttacattgtgaaa 16
Score = 77.8 bits (39), Expect = 5e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 18 ctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatgaat 76
|||||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 77 cta 79
|||
Sbjct: 71 cta 73
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| |||||| |||| | |||||||| |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 71 atgaatctagatagatat 88
||||||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| ||||||||| | ||||||||||||||| | |||||||||||||||||
Sbjct: 4 gtactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||||||||||| | ||| |||||||||||||||||| ||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||| | ||| |||||||||||||| |||| ||| |||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 91.7 bits (46), Expect = 3e-18
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Minus
Query: 46 catttctcacattcatattgat-ttaatgaatctagatagatatatatgtctagattcat 104
|||||| ||||||||||| | | |||||||||||||||| ||||| ||||||||||||||
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 35
Query: 105 caacatcaatatgaatgtggggaatgctagaatg 138
|||| | |||||||||||| ||||||||||||
Sbjct: 34 taacacctatatgaatgtggaaaatgctagaatg 1
Score = 75.8 bits (38), Expect = 2e-13
Identities = 87/102 (85%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 38 cattcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtct 96
|||||| |||||| ||||||||||| | | |||||||||||||| | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 97 agattcatcaacatcaatatgaatgtggggaatgctagaatg 138
|||||||| |||| | ||||||||||||| |||| |||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 40 ttcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctag 98
|||| ||||| | ||||||||||| || |||||||||||||||| |||||| || ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||| |||||| ||||||||||||| ||||||||||
Sbjct: 69 attcattaacatctatatgaatgtgggcaatgctagaa 106
Score = 83.8 bits (42), Expect = 7e-16
Identities = 85/98 (86%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 40 ttcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctag 98
|||| ||||| | ||||||||||| ||| ||||||||||||| | |||||||| |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||| ||||| ||||||||||||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttac 144
|||||||||||||||||||| |||||| ||||||||||| | ||||||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 145 gttgtgaaa 153
|| |||||
Sbjct: 113 attatgaaa 121
Score = 87.7 bits (44), Expect = 5e-17
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||| ||||||||||||||||||||| ||||| | ||||||||||| ||| |||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 71 atgaatctagatagatatat 90
||||||||||| | ||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt 49
|||| ||||||||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| | || |||||||||||||||||| || ||||| |||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/145 (83%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||| |||||||| | |||| ||||| || || ||||| ||| |
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgt 101
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||||||| ||| ||| | |||||||||||||| |||| | | ||||||||||| ||
Sbjct: 100 taatgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaa 41
Query: 129 tgctagaatgacttacgttgtgaaa 153
|||||||| | ||||| ||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaa 16
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| | ||||||||| | | | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | | ||||| | ||||||||| |||||| ||||| || ||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/145 (83%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||| |||||||| | |||| ||||| |||| || ||||| || |
Sbjct: 3 agtactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgt 62
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||||||| | | ||| |||||||||||||||| |||||| | |||||| |||| ||
Sbjct: 63 taatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaa 122
Query: 129 tgctagaatgacttacgttgtgaaa 153
||||| || | ||||| ||||||||
Sbjct: 123 tgctaaaaagtcttacattgtgaaa 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | || | ||||| | || |||||| | ||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | || ||| ||| ||||||||| ||| || ||||| || || | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 89.7 bits (45), Expect = 1e-17
Identities = 109/128 (85%), Gaps = 3/128 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||| | |||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctagatagatatatatgtcta--gattcatcaacatcaatatgaatgtggggaa 128
||||||||| ||| |||| | ||| || ||||||| |||||| ||||||||||||| ||
Sbjct: 65 atgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggcaa 124
Query: 129 tgctagaa 136
||||||||
Sbjct: 125 tgctagaa 132
Score = 73.8 bits (37), Expect = 7e-13
Identities = 107/128 (83%), Gaps = 3/128 (2%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||| | |||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 71 atgaatctagatagata--tatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||||||| | | | | ||||| | ||||||||| |||||| ||||||||||||| ||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 129 tgctagaa 136
||||||||
Sbjct: 40 tgctagaa 33
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 89.7 bits (45), Expect = 1e-17
Identities = 67/73 (91%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||| |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 71 atgaatctagata 83
||||||| |||||
Sbjct: 74 atgaatcaagata 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 98 gattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaaga 157
||||||| |||||||||||||||||||| ||||||| |||||||||| |||||||| ||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 158 gggagtagc 166
|| ||||||
Sbjct: 128 ggaagtagc 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||| | ||||||||| ||||||||||||| | |||||| |||||||||||||||
Sbjct: 3 agtactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgat 60
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||| | |||||||||| ||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 89 atatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttg 148
|||||| ||||||||| ||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 149 tgaaaaagagggagta 164
||||| |||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 75.8 bits (38), Expect = 2e-13
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||| ||||||||||| |||||| ||||||||||||||| ||
Sbjct: 141 gtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 82
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||| |||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 63 aacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 79 aacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagggagta 137
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 97 agattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||| | |||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||| ||||||||||| || |||||||||||| ||||||| |||||||||||||||
Sbjct: 138 gtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgat 82
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgat 80
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||| | |||||||||||||||||| | |||||| |||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggagtag 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| |||| |||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 97 agattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||| | |||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 124
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| | ||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 154 aagagggagta 164
|||||||||
Sbjct: 122 cggagggagta 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||| || |
Sbjct: 133 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 74
Query: 70 aatgaatctagata 83
||||||||||||||
Sbjct: 73 aatgaatctagata 60
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 98 gattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaaga 157
||||||| | |||||||||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 158 gggagtag 165
||||||||
Sbjct: 11 gggagtag 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 83
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 98 gattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaaga 157
||||||| | |||||||||||||||||| |||||||||||||||||| || ||||| ||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 158 gggagta 164
|||||||
Sbjct: 132 gggagta 138
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/157 (81%), Gaps = 13/157 (8%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
|||||||||||||| || ||| ||||||||||| |||||| | |||||||||||| ||
Sbjct: 147 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 88
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 87 aatgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaat 40
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtagc 166
| || |||||||||| || ||||| |||||||||||
Sbjct: 39 ggtaaaatgacttacattatgaaacggagggagtagc 3
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||| | |||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 71 atgaatctagat 82
||||||||||||
Sbjct: 65 atgaatctagat 76
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 87.7 bits (44), Expect = 5e-17
Identities = 128/157 (81%), Gaps = 13/157 (8%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
|||||||||||||| || ||| ||||||||||| |||||| | |||||||||||| ||
Sbjct: 4 gtacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 64 aatgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaat 111
Query: 130 gctagaatgacttacgttgtgaaaaagagggagtagc 166
| || |||||||||| || ||||| |||||||||||
Sbjct: 112 ggtaaaatgacttacattatgaaacggagggagtagc 148
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||| | |||||| ||||||||||||||| |||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 71 atgaatctagat 82
||||||||||||
Sbjct: 86 atgaatctagat 75
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| | ||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 154 aagagggagta 164
|||||||||
Sbjct: 15 cggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||| ||||||||||| ||||||| |||||||||||| || |
Sbjct: 4 gtactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgct 63
Query: 70 aatgaatctagata 83
||||||||||||||
Sbjct: 64 aatgaatctagata 77
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 121
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/154 (82%), Gaps = 8/154 (5%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| | ||||| |||||| |||||||| |||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||| || || ||| | ||| ||||| |||||||||||||||||||| |||
Sbjct: 91 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||| |||||||| |||||||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 117/143 (81%), Gaps = 8/143 (5%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||| ||||||||||| ||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||| ||| || || || || ||||| ||||||||||| |||||||| |||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 131 ctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||
Sbjct: 118 ctagaatgacttacattgtgaaa 140
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||||||||| | | ||||||||||||||||||||| ||
Sbjct: 148 gtactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtt 89
Query: 70 aatgaatctaga 81
||||||||||||
Sbjct: 88 aatgaatctaga 77
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtga 151
||||||||||||| |||||||||||||||||| | ||| ||| |||||||||| ||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 152 aaaagagggagta 164
|| |||||||||
Sbjct: 135 aacggagggagta 147
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgtt 147
||||||||||||||||| |||| |||||||||||| | |||||||||||||||||| ||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 148 gtgaaaaagagggagtagc 166
|||||| |||||| ||||
Sbjct: 122 gtgaaacggagggattagc 140
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatgaa 75
||||||||||| ||||||||||||||| |||||||||||||||||||| || | ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 76 tctaga 81
||||||
Sbjct: 73 tctaga 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| | |||||||||||||||||| ||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/116 (83%), Gaps = 13/116 (11%)
Strand = Plus / Plus
Query: 29 aatgtaagtcattcttgcatttctcacattcatattgatt-taatgaatctagatagata 87
||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat----------- 49
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgactta 143
|||||||||||||||| | |||||||||||||||| | |||||||||||||||||
Sbjct: 50 -atatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 67.9 bits (34), Expect = 4e-11
Identities = 47/50 (94%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 33 taagtcattcttgcatttctcacattcatattgat-ttaatgaatctaga 81
||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctaga 55
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 122/146 (83%), Gaps = 3/146 (2%)
Strand = Plus / Plus
Query: 9 tagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat- 67
||||||| |||||||||||||||||||| | |||| ||||| | | ||||||||||||
Sbjct: 2 tagtactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatg 61
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
||||||||||||| | |||| ||||||||||||| ||||| |||||||||||| |
Sbjct: 62 ttaatgaatctaggt--atatgcgtgtctagattcattaacatttatatgaatgtggaca 119
Query: 128 atgctagaatgacttacgttgtgaaa 153
||||||||| | ||||| || |||||
Sbjct: 120 atgctagaaagtcttacattatgaaa 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 128/154 (83%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||||||||||||||||||| | |||| ||||| ||||||||||| || |||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||||| |||||||||| ||||||||||||||| | || ||||
Sbjct: 96 atgaatctagacacgcatata--cctagattcattaacatcaatatgaatataggcaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| || ||||| |||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagtag 4
Query: 166 caa 168
|||
Sbjct: 3 caa 1
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 91 atgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtg 150
|||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 151 aaaaagagggagtagcaa 168
||| |||| ||||||||
Sbjct: 119 aaacggaggaagtagcaa 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||||| |||| || ||||||||||||||| |||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 71 atgaatcta 79
|||||||||
Sbjct: 72 atgaatcta 64
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||||||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 154 aagagggagta 164
|||||||||
Sbjct: 125 cggagggagta 135
Score = 81.8 bits (41), Expect = 3e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||| ||||||||||| |||||| ||||||||||||||| |||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 71 atgaatctagata 83
|||||||||||||
Sbjct: 75 atgaatctagata 63
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||| ||||||||||| |||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaa 16
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 85.7 bits (43), Expect = 2e-16
Identities = 65/71 (91%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 79 atgaatctaga 69
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgactta 143
||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgactta 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||||||||||||||||||| |||||| ||||||| || |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgat 60
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||| || |||||| |||||||||||||||||| || ||||| ||||||||||
Sbjct: 63 aacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagtag 4
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| |||||||||||||||||||| | |||| ||||| | ||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||| | | |||||||||||||||||| | ||| |||| |||||||| || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| || ||||| ||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacagaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/154 (82%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
||||||||| ||||||||||||||| | |||| || || | |||||| |||| ||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| | || |||||||||| | ||| ||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| || ||||| |||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 71 atgaatctag 80
||||||||||
Sbjct: 65 atgaatctag 74
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 95 ctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||| | |||||||||||||||||| ||||||| |||||||||| ||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 16
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 108 catcaatatgaatgtggggaatgctaga-atgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||||| ||||||| | ||||||||| |||||||| ||||||||||
Sbjct: 86 catcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagtag 144
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcat-tcttgcatttctcacattcatattgat 67
|||| ||||||||||| |||||||||||| | | ||||||| |||||||||||||||
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgat 87
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 71 atgaat 76
||||||
Sbjct: 66 atgaat 61
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||| || |||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaa 115
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| ||||||||||| ||||||||||||||| ||||||| ||| |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||| ||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||||| |||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 71 atgaat 76
||||||
Sbjct: 54 atgaat 49
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||| ||||||||||||||||| || |||||||||||||||||| ||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaa 103
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcat 61
||||| ||||||||||| ||||||||||||||| ||||||| |||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 115 atgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 83.8 bits (42), Expect = 7e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 71 atgaatctag 80
||||||||||
Sbjct: 83 atgaatctag 74
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 95 ctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||| | |||||||||||||||||| ||||||| |||||||||| ||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtggggaatgctaga-atgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||||| ||||||| | ||||||||| |||||||| ||||||||||
Sbjct: 62 catcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggagggagtag 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcat-tcttgcatttctcacattcatattgat 67
|||| ||||||||||| |||||||||||| | | ||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgat 61
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagtag 124
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||||||||||||||||| | ||| || |||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| |||| |||||| ||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 101 tcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||| ||||||||||||||||||| | ||||| |||||||||| || |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaa 16
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 82 tagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgact 141
||||||||| | ||||||| ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Query: 142 t 142
|
Sbjct: 123 t 123
Score = 77.8 bits (39), Expect = 5e-14
Identities = 101/123 (82%), Gaps = 14/123 (11%)
Strand = Plus / Minus
Query: 34 aagtcattcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatat 92
|||||||||| ||||||| ||||||||||||||| |||||| |||||||||||||||| |
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 93 -------------gtctagattcatcaacatcaatatgaatgtggggaatgctagaatga 139
||||||| ||| |||||||||||||||||||| |||||||||||||
Sbjct: 63 agatacattaaccatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 4
Query: 140 ctt 142
|||
Sbjct: 3 ctt 1
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa
Japonica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||||||||||||||| ||||||||| ||||| |||||||||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 87 atatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgt 146
|||||||||||||||||| | | |||||||||||||| |||||||||||||||||| |
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 147 tgtgaaa 153
|||||||
Sbjct: 113 tgtgaaa 119
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| | ||||||||||| |||||| ||||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 81.8 bits (41), Expect = 3e-15
Identities = 80/91 (87%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 45 gcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctagattca 103
||||||| ||| ||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 4 gcatttcccacgttcatattgatattaatgaatctagatagatataa---tctagattca 60
Query: 104 tcaacatcaatatgaatgtggggaatgctag 134
| || ||||||||||| ||||| ||||||||
Sbjct: 61 ttaatatcaatatgaacgtgggaaatgctag 91
Score = 73.8 bits (37), Expect = 7e-13
Identities = 79/91 (86%), Gaps = 4/91 (4%)
Strand = Plus / Minus
Query: 45 gcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctagattca 103
||||||| ||| ||||||||||| ||||||||||||||| ||||| | ||||||||||
Sbjct: 88 gcatttcccacgttcatattgatattaatgaatctagat---tatatctatctagattca 32
Query: 104 tcaacatcaatatgaatgtggggaatgctag 134
| || ||||||||||| ||||| ||||||||
Sbjct: 31 ttaatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||| |||||||||| ||||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 71 atgaa 75
|||||
Sbjct: 65 atgaa 69
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 100 ttcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||| |||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaa 16
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||||||||||||||| ||||||||||||||| |||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatatt 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||| ||||| |||||| | |||||||||||||||||| ||||||||
Sbjct: 63 aacattaatataaatgtgagaaatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||||||||||||||| |||||||||| |||| |||||| || ||||||||| || |
Sbjct: 136 agtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgt 77
Query: 69 taatgaatctagatagatatatatg 93
|||||||||||||| |||||||||
Sbjct: 76 taatgaatctagatgaatatatatg 52
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||| ||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||||| ||||||||| ||| |||||||||| ||||||| ||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||| |||| ||||||||||||| || ||||| |||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 81.8 bits (41), Expect = 3e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 53 cacattcatattgatttaa-tgaatctagatagatatatatgtctagattcatcaacatc 111
||||||||||| ||| ||| |||||||||| | |||||| ||||||||||||| ||||||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 112 aatatgaatgtggggaatgctagaa 136
||||||||||||| |||||||||
Sbjct: 33 tatatgaatgtgggtgatgctagaa 9
Score = 81.8 bits (41), Expect = 3e-15
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 53 cacattcatattgat-ttaatgaatctagatagatatatatgtctagattcatcaacatc 111
||||||||||| ||| |||||||||||||| | |||||||||||||||||||| |||||
Sbjct: 22 cacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacatc 81
Query: 112 aatatgaatgtggggaatgctagaa 136
||||||||||| | |||||||||
Sbjct: 82 tatatgaatgtgtgtgatgctagaa 106
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/112 (84%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| ||||||| ||||| ||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgt 122
||||||||| | | || ||||||||| |||||| |||||| | ||||||||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgt 47
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||||| ||||||| || ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 69.9 bits (35), Expect = 1e-11
Identities = 70/79 (88%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcat-tcttgcatttctcacattcatattgat-tt 69
|||| ||||||||||| |||||||||| ||| |||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 70 aatgaatctagatagatat 88
|||||||||||||||||||
Sbjct: 65 aatgaatctagatagatat 83
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||| |||| |||||||||||||||||| ||||||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 126
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctaga-atgacttacgttgtgaa 152
||||||||||| |||||||||||||||||||| |||| |||| ||||||| |||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 153 aaagagggagta 164
| |||||||||
Sbjct: 16 acggagggagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||| ||||| |||||| |||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 71 atgaatctagat 82
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| | |||||||||||||||| ||||||||||| |||||| ||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 154 aagagggagta 164
|||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgat 83
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||| |||||||||| ||||||||||| |||||| |||||||||| |||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 71 atgaatctagatag 84
||||||||||||||
Sbjct: 65 atgaatctagatag 78
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
||||||||||||||||||| ||||||| |||||||||| || ||||| ||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagtag 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| | ||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
Query: 154 aagagggagta 164
||||| ||||
Sbjct: 15 cagaggaagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 67.9 bits (34), Expect = 4e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 71 atgaatctagatagatat 88
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 125
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| ||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 60 atcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaa 152
|||||||||||| |||||| ||||| ||||||| ||||||||||||| |||| || ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 153 aaagagggagta 164
| ||||||||||
Sbjct: 121 acagagggagta 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt 49
|||||||||||||||||||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| |||||||||||||| ||||||| ||||| | ||||| ||||| ||| |||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 72 atgaatctaga 62
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttac 144
||||| |||||||||||||| |||||| |||||||||||| |||||||||| | |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 145 gttgtgaaaaagagggagta 164
|| ||||| ||||||||||
Sbjct: 113 attatgaaacagagggagta 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| |||| ||||||||||||||| | |||| ||||| ||||||||||| ||| |
Sbjct: 134 agtactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgt 75
Query: 69 taatgaatctaga 81
|||||||||||||
Sbjct: 74 taatgaatctaga 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||||||| |||||||||||||| | |||| ||||| |||||||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatat 56
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||| |||||||||||| |||||||||| | ||||| || |||||| |||| ||||
Sbjct: 62 acatctatatgaatgtggacaatgctagaaagtcttacattatgaaaaggaggaagta 5
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||||| ||||||| |||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 71 atgaatct 78
||||||||
Sbjct: 75 atgaatct 68
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 97 agattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaag 156
|||||||| || |||||| |||||||||| ||||||||||||||||| |||||||| |
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 157 agggagtagca 167
||| |||||||
Sbjct: 128 aggaagtagca 138
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||| |||||||| | ||||||||||||||||| |||||||| ||||||||||
Sbjct: 60 atcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggagtag 4
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||| ||||||||||| ||||||| |||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 75.8 bits (38), Expect = 2e-13
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||||| |||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 71 atgaatctagatagatat 88
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| |||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 60 atcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 125
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||||||||| | |||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgat 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||| | ||| |||||||||||||| |||||||| |||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| |||| |||||||||||||||||||| | ||||| ||||||| ||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgat 88
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 79.8 bits (40), Expect = 1e-14
Identities = 106/127 (83%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgattt-- 69
|||| ||||||||||||| | |||| | |||| ||||| | ||||||||||| ||| |
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||| |||||||| | || |||| ||||||||||| |||||| ||||||||||||| |||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaatgtgggcaat 124
Query: 130 gctagaa 136
|||||||
Sbjct: 125 gctagaa 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 108/128 (84%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| | | |||| | |||| ||||| | ||||||||||| ||| ||
Sbjct: 160 gtactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtt 101
Query: 70 aatgaatctagatagatatatatgtctagattcatc-aacatcaatatgaatgtggggaa 128
|||||||||||||| || || |||||||||| || |||||| ||||||||||||| ||
Sbjct: 100 aatgaatctagatatatgtaggtgtctagattaatttaacatctatatgaatgtgggtaa 41
Query: 129 tgctagaa 136
||||||||
Sbjct: 40 tgctagaa 33
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| |||||||| |||||| ||||||| |||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgat 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaa 121
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 91 atgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtg 150
|||||||||||||| | ||||||||| ||| |||| ||||||| |||||||||| |||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 151 aaaaagagggagta 164
|| |||||||||
Sbjct: 18 gaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||| || ||||||||||||| | ||||||| || ||| |||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||||||||||||| ||||||||||||||| ||||||| |||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatat 79
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 63 aacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 56
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 101 tcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||| |||||| ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa
Indica Group
Length = 142
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttac 144
|||||||||||||||| |||||| ||| |||||||| |||| |||||||||||||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttac 118
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||| ||||||||||||||||| ||||| ||||||| ||| ||| |||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 71 atgaatctaga 81
||||||||||
Sbjct: 78 gtgaatctaga 68
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||| ||||||||||| | |||| ||||||||||||| || ||||| |||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||| | |||||||||| ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgtt 147
||||||||||||||||| | ||||||||| ||| || | ||||||| |||||||||| ||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 148 gtgaaa 153
||||||
Sbjct: 21 gtgaaa 16
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 108 catcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||| ||||||||| | |||||| |||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgat 84
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 87 atatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgt 146
|||||| ||||||||||| ||||||||||||||||||| |||| |||| |||||||| |
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 147 tgtgaaaaagagggagtag 165
|||||| ||||||||||
Sbjct: 113 ggtgaaacggagggagtag 131
Score = 67.9 bits (34), Expect = 4e-11
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||||| ||| ||||| ||||||||||||||| |||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 71 atgaatctagatagatat 88
||||||||||||| ||||
Sbjct: 70 atgaatctagatatatat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||| ||||||||||| |||| |||||| | | |||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 77.8 bits (39), Expect = 5e-14
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||||||||| | ||||| || |||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaa 152
|||||||||||| | ||||||||||||| |||| ||| |||||||||||||| || ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 153 aaagagggagtag 165
| ||||||||||
Sbjct: 125 acggagggagtag 137
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||| ||||| | |||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgat 60
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||| || | ||| ||||||| |||||| ||||||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaa 16
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 127/155 (81%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||| | |||| | | | | || |||||||| ||| ||
Sbjct: 4 gtactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtt 63
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
||||||| |||| | |||||||||||||||||| |||||| |||||||| |||| |||
Sbjct: 64 aatgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaat 123
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 124 actagaaagtcttacattgtgaaacggagggagta 158
Score = 67.9 bits (34), Expect = 4e-11
Identities = 125/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | |||| | ||| | || |||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||| |||||| |||||| |||||| |||||||| |||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| | |||||| |||||||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 77.8 bits (39), Expect = 5e-14
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtt 62
Query: 70 aatgaat 76
|||||||
Sbjct: 63 aatgaat 69
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcat 61
||||||||||| ||||||||||||||| |||||| ||||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcattt-tcacattcat 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 49/55 (89%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||| |||||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 69 attcattaacatcaatatggatgtgaa-aatgctagaatgacttacattgtgaaa 16
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 75 aatgctagaatgacttacattgtgaaa 101
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcata 62
|||||||||||||||| ||||||||||||||| ||||||| ||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 114 tatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||| |||||||||||||||||| ||||||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaa 84
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||||| |||||||| ||||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacagagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttct 52
||||| |||| |||||| ||||||||||||||| ||||||||
Sbjct: 4 gtactccctctgtttcacaatgtaagtcattctagcatttct 45
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 77.8 bits (39), Expect = 5e-14
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||| ||||||||||||||| |||||| | |||||||||||| |
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgt 62
Query: 69 taatgaatctagata 83
|||||||||||||||
Sbjct: 63 taatgaatctagata 77
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||||||||||||||| | | |||||||||||||||||| ||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 154 aagagggagta 164
|||||||||
Sbjct: 15 cggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||| || ||| |||||||||||| ||||||||
Sbjct: 80 aacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaa 127
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattga 66
|||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt 68
|||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttc-cacattcatattgatt 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 103
Score = 56.0 bits (28), Expect = 2e-07
Identities = 50/56 (89%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 59 atcaatatgaatgtgga-aatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| ||||| || |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 71 atgaatctagatag 84
|||||| |||||||
Sbjct: 65 atgaatgtagatag 78
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||| ||||||||||||||||||||||||| | | |||| ||| ||||||||||||
Sbjct: 138 agtactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgat 81
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||| |||||| ||||||||||||||| ||| |||| ||||||||||||| ||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtag 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||||||||| ||||||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgat 60
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||||
Sbjct: 120 gtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 108 catcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||| |||| ||||||||||||||||| ||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 16
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaa 108
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 19 tccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||||||| ||| ||||||||||| ||||||| || ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgat 60
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| |||||| || |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 71 atgaat 76
||||||
Sbjct: 65 atgaat 70
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||| ||||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaa 16
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 18 ctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatttaat 72
|||||||||||||||||||||||||| |||||| || |||||||||||| ||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgtaat 69
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||| ||| |||||||||||||||||| || |||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaa 118
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 91 atgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtg 150
|||| ||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 151 aaaaagagggagta 164
||| |||||||||
Sbjct: 18 aaacggagggagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatttaa 71
|||| ||||||||||| ||||||||| ||||| |||||| ||||||||||||||| | |
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtta 64
Query: 72 tgaatcta 79
||||||||
Sbjct: 65 tgaatcta 72
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||||| |||||| || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 76
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaa 120
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 8 gtagtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcat 61
|||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||
Sbjct: 1 gtagtactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgactt 142
|||||| | |||||||||||||||||| ||||||| ||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgactt 92
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 115 atgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||| | ||||||||||||| |||| |||||||| |||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||||| |||| || |||| |||||||| | ||||||| |||||||||||||||
Sbjct: 114 tacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgat 59
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 100 ttcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagg 159
||||| ||||||| ||| |||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 160 gagta 164
|||||
Sbjct: 117 gagta 121
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||| ||||||| |||||||||| ||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaa 16
Score = 58.0 bits (29), Expect = 4e-08
Identities = 57/65 (87%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||| ||||||||||| ||||||| |||||| ||| |||| |||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 71 atgaa 75
|||||
Sbjct: 61 atgaa 57
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||||||||||||||| |||||| |||| || |||||||| |||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 71 atgaat 76
||||||
Sbjct: 71 atgaat 66
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||| ||||||||||| || ||| |||||||||||||||||| ||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaa 120
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcattt 50
||||| ||||||||||| ||||||||||||| | ||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcattt 43
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 126/154 (81%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | || | | ||| | ||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||| | | || |||||||||||||| || |||||| | ||| ||||||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| |||||||| |||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 94/113 (83%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| ||||||||||| |||||||| | |||| ||||| | ||||| ||| | ||| |
Sbjct: 160 agtactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgt 101
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatg 121
|||| |||||||| | ||| |||||| ||||||||| |||||| | |||||||
Sbjct: 100 taataaatctagacatatacatatgtttagattcattaacatctaaatgaatg 48
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttac 144
|||||||||||||||||||| |||||| | |||||||||| |||||||||| | |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 145 gttgtgaaa 153
||||||||
Sbjct: 24 attgtgaaa 16
Score = 56.0 bits (28), Expect = 2e-07
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| ||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 71 atgaatctagatagatatat 90
||||||||||| | ||||||
Sbjct: 65 atgaatctagacatatatat 84
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 89 atatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttg 148
||||||||||||| || |||||| ||||||||||||| |||||||||| | ||||| |||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 149 tgaaa 153
|||||
Sbjct: 119 tgaaa 123
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 71 atgaatctaga 81
|| ||||||||
Sbjct: 74 ataaatctaga 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| ||||||||||||| |||||| | |||| ||||| ||||||||||||
Sbjct: 4 gtactccctccgtttcatattgtaagactttctagcattgttcacattcatat 56
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
||||||||||||| | | ||||||| |||||||||| |||||| ||||||||||||| |
Sbjct: 38 ttaatgaatctaggcatacatatatgcctagattcattaacatctatatgaatgtgggca 97
Query: 128 atgctagaa 136
|||||||||
Sbjct: 98 atgctagaa 106
Score = 67.9 bits (34), Expect = 4e-11
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 40 ttcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctag 98
|||| ||||| | ||||||||||| ||| ||||||||||||| | |||| |||| ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||| ||||| |||||||| |||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaa 9
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt 68
|||| ||||||||||| ||| ||||||||||| ||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatt 61
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 110 tcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaa 154
|||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaa 105
Score = 63.9 bits (32), Expect = 7e-10
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgttt-cataatgtaagtcattcttgcatttctcacattcatattga 66
|||||||||||||| || ||| ||||||||||| ||||||| ||||||||||||||
Sbjct: 116 tacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa
Indica Group
Length = 144
Score = 71.9 bits (36), Expect = 3e-12
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
||||||||| |||||||||| |||||| |||| ||||| |||| |||||||| ||| |||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 71 atgaatctagat 82
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||| |||||||| || | |||||||||| |||||| || |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 154 aagagggagtag 165
||||| |||||
Sbjct: 15 cagaggaagtag 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||||||| |||| | |||| ||||| | || |||||||| ||| |
Sbjct: 141 gtactccctccgtttcataatataagactttctagcattacccatattcatatagatgct 82
Query: 70 aatgaatctagat 82
|||||||||||||
Sbjct: 81 aatgaatctagat 69
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
||||||||||| | |||| |||||||| |||| ||||||||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaa 112
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| ||||||||||| ||||||||| ||||| |||||| |||| | |||||||| ||
Sbjct: 4 gtactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtt 63
Query: 70 aatgaatctagatagatata 89
|||||||||| |||||||||
Sbjct: 64 aatgaatctatatagatata 83
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaa 155
||||||||| ||||||||||| | ||||| ||||||||||| |||||| ||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 156 gagggagta 164
|||||||||
Sbjct: 13 gagggagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||| | ||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgat 38
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtggggaatgctagaatgactta 143
|||||||||| |||||| | |||||||||||||||||
Sbjct: 36 acatcaatataaatgtgagaaatgctagaatgactta 72
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcac 55
|||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttctcac 83
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||| |||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 63 aacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||| ||||| ||||| ||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgat 60
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 89 aatgctagaatgacttacattgtgaaa 115
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 101 tcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagaggg 160
|||| ||||||||||||||||||| ||||||| |||||||||| |||||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 161 agta 164
||||
Sbjct: 8 agta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgat 60
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||||||| ||||||| ||| | |||| |||||||| |||||||||
Sbjct: 70 aacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||| ||||||||||| ||||||| | ||| | |||||| |||||||||||||||
Sbjct: 129 gtactccctccgtttcacaatgtaatttattttagcattttccacattcatattgat 73
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaa 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||||||||||||||||| | |||| | |||| | ||| | |||||||||||
Sbjct: 3 agtacttcctccgtttcatattataagactttctagtattacccacattcatat 56
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 86 tatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacg 145
|||| ||||||||||| || ||||||||||||||| |||| ||||||| |||||||| |
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 146 ttgtgaaa 153
||||||||
Sbjct: 118 ttgtgaaa 125
Score = 69.9 bits (35), Expect = 1e-11
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||| |||||||| | ||||||| || |||||||||||| |||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 71 atgaatctaga 81
|| ||||||||
Sbjct: 76 ataaatctaga 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattca 60
||||||||||||||||| ||||||||| ||||| | ||||| ||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 90 tatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgt 149
|||||||||||| || |||||| |||||||||||| ||||||||||| |||||| || |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 150 gaaaaagagggagta 164
|||| |||||||||
Sbjct: 123 gaaacggagggagta 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattca 60
|||||||||||||||||||||||||| ||||| ||||| | ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||||| ||||| ||||| ||||||||||| ||| |||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 71 atgaatctaga 81
|| ||||||||
Sbjct: 77 ataaatctaga 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 116 tgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||| ||||||||||| |||||| || |||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaa 16
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattga 66
|||| ||||| ||||||||||||||||||||| | |||| |||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||||||| | | |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtagc 166
||||||||||||||||| ||| ||| |||||||||| |||||||| |||||||||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagtagc 3
Query: 167 aa 168
||
Sbjct: 2 aa 1
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 110 tcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||| ||| |||||||||||||| || ||||| |||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatt 49
||||||||||||||||||||||||||||||||| |||||
Sbjct: 137 gtacttcctccgtttcataatgtaagtcattctagcatt 99
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattct 43
|||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattct 36
Score = 54.0 bits (27), Expect = 7e-07
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 87 atatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgt 146
||||| |||||||||||| || ||| ||||| || |||| ||| ||||||||||||| |
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 147 tgtgaaaaagagggagtag 165
| ||||| ||||||||||
Sbjct: 22 tatgaaacggagggagtag 4
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattg-attt 69
||||||||| ||||||||||| ||||||||||| ||||||||||||| |||| | | ||
Sbjct: 4 gtacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatt 63
Query: 70 aatgaatctagata 83
| ||||||||||||
Sbjct: 64 agtgaatctagata 77
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacat 57
|||| ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 119 atgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
||||||| |||||||||||||||||| || ||||| ||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagtag 129
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtga 151
|||||||||| || |||||| |||||||||||| |||||||||| | ||||| ||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 152 aaaagagggagtag 165
|| ||||||||||
Sbjct: 128 aacggagggagtag 141
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| |||||||| | |||| ||||| ||||||||||| ||| |||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 71 atgaatctaga 81
|| ||||||||
Sbjct: 80 ataaatctaga 70
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| ||||| |||| ||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 71 atgaatctag 80
||||||||||
Sbjct: 71 atgaatctag 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 95 ctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaa 154
|||||||||| | |||||||||||| ||| |||| ||||||||||||| ||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 155 agagggagta 164
|||||||||
Sbjct: 122 ggagggagta 131
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||||||||| ||| ||||||||||| ||||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaa 155
|||||| || ||||||||||| | ||||| |||||||||||||||||| ||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 156 gagggagtag 165
||||||||||
Sbjct: 131 gagggagtag 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| |||||| |||| | |||||||| |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 71 atgaatctagatagata 87
|| |||||| |||||||
Sbjct: 79 ataaatctatatagata 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||| ||||| ||||| ||||||||||||| | |||||| ||||| | ||||||||
Sbjct: 4 gtactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 67.9 bits (34), Expect = 4e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||| ||||| |||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||| ||||||||||| |||||| |||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||| ||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 67.9 bits (34), Expect = 4e-11
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 40 ttcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctag 98
|||| ||||| | ||||||||||| ||| ||||||||||||| | | ||| ||||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||| ||||| |||||||||||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaa 9
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 68 ttaatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtgggga 127
|||||||||||||| | ||| | || |||||||||| |||||| ||||||||||||| |
Sbjct: 38 ttaatgaatctagacatgtatgtgtgcctagattcattaacatctatatgaatgtgggca 97
Query: 128 atgctagaa 136
|||||||||
Sbjct: 98 atgctagaa 106
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 104/126 (82%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| | |||| | |||| ||||| | ||||||||||| || |||
Sbjct: 5 tacttcctccgtttcaagttataagactttctggcattgcccacattcatatatatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|| |||||||| | |||||| || | |||||||| ||||| ||||||||||||| ||||
Sbjct: 65 ataaatctagacatatatatgtgccaagattcattaacatatatatgaatgtgggcaatg 124
Query: 131 ctagaa 136
||||||
Sbjct: 125 ctagaa 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 82/98 (83%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 40 ttcttgcatttctcacattcatattgat-ttaatgaatctagatagatatatatgtctag 98
|||| ||||| | ||||||||||| || ||||||||||| | | ||||||||||||||
Sbjct: 130 ttctagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctag 71
Query: 99 attcatcaacatcaatatgaatgtggggaatgctagaa 136
||| || ||||| ||||||||||||| ||||| ||||
Sbjct: 70 atttattaacatatatatgaatgtgggcaatgccagaa 33
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 91 atgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||||||||||| |||||| ||||||||||||| ||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaa 98
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||| | |||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 66 atgaatctaga 56
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 67.9 bits (34), Expect = 4e-11
Identities = 62/70 (88%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||| |||||||||||||||||||| | |||| ||||| | ||||||||||| ||| ||
Sbjct: 141 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 82
Query: 70 aatgaatcta 79
||||||||||
Sbjct: 81 aatgaatcta 72
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaa 155
||||||||| |||||| ||||||||||||| |||||||||| | ||||| || |||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 156 gagggagta 164
|||||||||
Sbjct: 132 gagggagta 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||| |||||||||||||||||| | |||| ||||| | ||||||||||
Sbjct: 5 tacttcttccgtttcataatgtaagactttctagcattgcctacattcatat 56
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||| ||||||||||| ||||||||||||| | |||||||||| ||| ||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||| ||||||||| | |||||||||| ||| ||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgat 67
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||| ||| || | ||||||| |||||||||| |||||||| |||||||||
Sbjct: 63 aacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattga 66
|||||| ||||||||||| ||||||||||||||| ||||||| ||| || |||||||
Sbjct: 3 agtactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 110 tcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||| || ||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt 49
|||||| ||||||||| ||| ||||||||||| |||||
Sbjct: 104 tacttcttccgtttcacaatataagtcattctagcatt 67
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtga 151
|||||| |||||| |||||| ||||||||||||| |||||||||| | ||||| || |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 152 aaaagagggagta 164
|| |||||||||
Sbjct: 17 aacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||||||||||||||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctaga 81
|||||| ||||
Sbjct: 65 atgaatttaga 75
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| |||||||||||||||||||| | |||| ||||| | |||||||||||
Sbjct: 143 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatat 91
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||| ||||||||||||| |||||||||| | ||||| || ||||| |||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtag 126
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 109 atcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||| ||||||||||| |||||| |||||||| |||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||| ||||| |||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||| ||||| |||||| |||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||||||||||||||| ||||||||||||| | | ||||| ||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||| ||| ||| |||||||||| ||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaa 98
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcatt 41
||||| ||||||||||| |||||||||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttc 51
||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 19 tccgtttcataatgtaagtcattcttgcatttctcacatt 58
||||||||||||| ||||||||| | ||||||||||||||
Sbjct: 84 tccgtttcataatataagtcattttagcatttctcacatt 45
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 42 aatgctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttac 144
|||||||||||||||||||| | ||||||||||||| || ||||||| |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 145 gttgtgaaa 153
||||||||
Sbjct: 113 attgtgaaa 121
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagag 158
||||||||| ||| |||||||||||||||||| |||||||| ||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagag 11
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| ||| |||||| ||||||||||||||| ||||||| | |||||||||
Sbjct: 5 tactttctctgtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 54.0 bits (27), Expect = 7e-07
Identities = 67/79 (84%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 13 acttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaa 71
||||||||||||||| ||| ||||||||| | |||||| | |||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 72 tgaatctagatagatatat 90
|||||||||| | ||||||
Sbjct: 71 tgaatctagacatatatat 53
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 82 tagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 53 tagatatatatgtctagattcattaacatatatatgaatgtgggcaatg 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 82 tagatatatatgtctagattcatcaacatcaatatgaatgtggggaatgctag 134
|||| |||||| ||||||||||| ||||| ||||||||||||| ||||||||
Sbjct: 38 tagacatatatatctagattcattaacatatatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 98 gattcatcaacatcaatatgaatgtggggaatgctagaatgactt 142
||||||| | |||||||||||||||||| ||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 98 gattcatcaacatcaatatgaatgtggggaatgctagaatga 139
||||||| | |||||||||||||||||| |||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 34 aagtcattcttgcatttctcacattcatattgat 67
|||||||||| ||||||| |||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgat 34
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 37 tcattcttgcatttctcacattcatattgat 67
||||||| ||||||| |||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgat 57
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 123/154 (79%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||| ||||||||||||||| | |||| ||| ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| |||| |||||| | ||||||||||||||| | ||||
Sbjct: 65 atgaatctaga------------tctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||||||| |||| |||||||| |||||||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||| ||||||| |||||| ||||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgat 91
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| | ||||||||| ||| || ||| |||||||||||||| ||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 154 aagagggagta 164
|||||||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
||||||||||||||||| ||| ||||||||| | |||||| |||||||||| |||||
Sbjct: 138 gtacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgat 82
Score = 63.9 bits (32), Expect = 7e-10
Identities = 57/64 (89%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 17 cctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-ttaatgaa 75
||||||||||| ||| ||||||||||| |||||||||| || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 76 tcta 79
||||
Sbjct: 70 tcta 73
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||| || |||||||| || || | ||||||||||||||||| ||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaa 16
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| ||| ||||||||| | | |||| ||||||||||||||| |||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 71 atgaatcta 79
|||||||||
Sbjct: 70 atgaatcta 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||||||||| ||||||||||||| ||| |||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgat 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||| ||||||||||||||||||| ||| ||| ||||||||| ||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaa 119
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||||||||||||| ||| | | |||||||||| |||||||| |||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 63.9 bits (32), Expect = 7e-10
Identities = 88/104 (84%), Gaps = 7/104 (6%)
Strand = Plus / Plus
Query: 40 ttcttgcatttctcacattcatattgat-ttaatgaatctagata----gatat--atat 92
|||| ||||| | ||||||||||| ||| |||||||||||||||| ||||| || |
Sbjct: 5 ttctagcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgt 64
Query: 93 gtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||||||||| |||||| ||||||||||||| |||| |||||
Sbjct: 65 gtctagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 89 atatgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
|||| ||||||||||| |||||| ||||||||||||| ||||||||||
Sbjct: 52 atatatctagattcattaacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
|||||||||||||||||||| | |||| ||||||||||||| |||| |||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaa 110
Score = 44.1 bits (22), Expect = 6e-04
Identities = 68/82 (82%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgatt-ta 70
|||| ||||||||||||| | |||| | |||| |||| | ||||||||||| ||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 71 atgaatctagatagatatatat 92
||||||||||| | ||||||||
Sbjct: 78 atgaatctagacatatatatat 57
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| |||| |||||||||| | |||| ||||||| ||||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattct 43
|||| ||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattct 36
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 63.9 bits (32), Expect = 7e-10
Identities = 74/87 (85%), Gaps = 7/87 (8%)
Strand = Plus / Minus
Query: 45 gcatttctcacattcatattgattt-aatgaatctagatagatatatatgtctagattca 103
||||||| ||||||||||||||| | |||||||||||| |||| |||||||||||
Sbjct: 85 gcatttcccacattcatattgatgtcaatgaatctagacagat------gtctagattca 32
Query: 104 tcaacatcaatatgaatgtggggaatg 130
| ||||||||||||||||||| ||||
Sbjct: 31 ttgacatcaatatgaatgtgggaaatg 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgctag 134
||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 46 tgtctagattcattgacatcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 63.9 bits (32), Expect = 7e-10
Identities = 123/154 (79%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | |||| ||||| |||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | |||||||||| |||||| ||||| ||||||| ||||
Sbjct: 65 atgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
|||||| | ||||| || ||||| |||||||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggagta 147
Score = 63.9 bits (32), Expect = 7e-10
Identities = 63/72 (87%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| |||||||||||||||||||| | |||| ||||| | ||||| ||||| ||| |
Sbjct: 149 agtactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgt 90
Query: 69 taatgaatctag 80
||||||||||||
Sbjct: 89 taatgaatctag 78
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||||||||||||||| ||||||||||||| | | |||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 106 aacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||||||||||| ||| ||| |||||||||| ||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02029549.1/21613-21774 39946:Oryza sativa
Indica Group
Length = 162
Score = 63.9 bits (32), Expect = 7e-10
Identities = 105/128 (82%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||| |||||||||||||||||||| | |||| ||| | | |||||||||| ||| |
Sbjct: 3 agtactccctccgtttcataatgtaagactttctagcactgtttacattcatatagatgt 62
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaa 128
||||| ||||| | | || || ||||||||||||| ||||| || |||| ||||| ||
Sbjct: 63 taatggatctatacacttacatgtgtctagattcattgacatctatgtgaacgtgggcaa 122
Query: 129 tgctagaa 136
||||||||
Sbjct: 123 tgctagaa 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 93/114 (81%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
||||||||||||| |||||||| |||| | |||| ||||| | ||| |||| || ||| |
Sbjct: 160 agtacttcctccgcttcataatataagactttctagcattgcccacgttcacatagatgt 101
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgt 122
|||||||||||| | || || ||| ||||| ||| |||||| ||||||||||
Sbjct: 100 caatgaatctagacacatgtaagtgtatagatccattaacatctatatgaatgt 47
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||| |||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||| ||||||||||| ||||||||||||||| ||||||| |||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacatt 58
|||| ||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 118 aatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
|||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 113 atatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||| |||||||| |||||||||||||||||| ||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaa 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 20 ccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||||| ||||||||||||||| ||||||| |||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacat 57
||||| ||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 119 atgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 125 ggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||| |||| |||||||| |||||||||
Sbjct: 56 ggaatgctagaatgatttacattgtgaaacggagggagta 95
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt 49
|||| ||||||||||| ||||||| ||||||| |||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
|||||||||||||||||||| | |||| | |||| |||| | ||||||||||| || |
Sbjct: 3 agtacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgt 62
Query: 69 taatgaatctagatagatatatatgtctagattcatcaacatcaatatgaa 119
|||||||||||| | |||||| ||| ||||||||| ||||| |||||||
Sbjct: 63 caatgaatctagacatatatatgtgtttagattcattgacatctatatgaa 113
Score = 61.9 bits (31), Expect = 3e-09
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||| | | |||||||||||||||||||| |||| ||||||||||||| |||
Sbjct: 99 aatgaatctaaacacatatatatgtctagattcattgacatatatatgaatgtgggcaat 40
Query: 130 gctagaa 136
| |||||
Sbjct: 39 gttagaa 33
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcattt 50
|||||||||||||||| ||||||||||||||| ||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattt 70
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcat 61
||||| ||||||||||| ||||||||||||| | ||||||| | |||||||
Sbjct: 4 gtactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 127 aatgctagaatgacttacgttgtgaaa 153
|||||||||||||||||| ||||||||
Sbjct: 71 aatgctagaatgacttacattgtgaaa 97
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcata 62
|||||||||||||||| ||||||||||||||| | |||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||||||||||||| ||| ||||||||||| | ||||||| ||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatat 88
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 114 tatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaa 16
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/66 (83%)
Strand = Plus / Plus
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgtt 147
||||||||||||||||| |||| ||||| ||| | | ||| ||||||||||||| ||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 148 gtgaaa 153
||||||
Sbjct: 123 gtgaaa 128
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 61.9 bits (31), Expect = 3e-09
Identities = 125/154 (81%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | || | ||||| |||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||| || ||| | ||||||||||| |||||| |||| |||||| ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 131 ctagaatgacttacgttgtgaaaaagagggagta 164
||||| | ||||| || ||||| |||||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 116/143 (81%), Gaps = 3/143 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||||||||||||||||||| | |||| |||| ||||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 71 atgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||| | ||| |||| ||||||||||| || ||| | || ||||||| ||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 131 ctagaatgacttacgttgtgaaa 153
||| || | ||||| ||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaa 145
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
|||||||||||||| ||||| | |||||||||||||||||| ||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatg 130
||||||||||||||||| || | |||||||||||||||||| ||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacat 57
||||||||||||| || ||||||||||||||| ||||||| |||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattct 43
||||| ||||||||||| |||||||||||||||
Sbjct: 95 gtactccctccgtttcacaatgtaagtcattct 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 119 atgtggggaatgctagaatgacttacgttgtg 150
||||||| |||||||||||||||||| |||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtg 19
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 130 gctagaatgacttacgttgtgaaaaagagggagta 164
||||||||||||||| |||||||| |||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AAAA02023450.1/14767-14902 39946:Oryza sativa
Indica Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaa 136
||||||||| |||||| ||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaa 104
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
||||||||||| |||||||| | |||| | |||| ||||| | ||||||||||| ||| |
Sbjct: 134 agtacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgt 75
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 74 taatgaatcta 64
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
||||| |||||||||||||||||||| | |||| ||||| | |||||||||||
Sbjct: 4 gtactccctccgtttcataatgtaagactttctagcattgcccacattcatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 107 acatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||| ||||||||||||| |||||||||| | ||||| || ||||| |||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 92 tgtctagattcatcaacatcaatatgaatgtggggaatgcta 133
|||||| |||||| |||||| ||||||||||||| |||||||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgcta 111
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||||||||||||||||| | || | ||||| | ||||||||||| ||| |||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 71 atgaatctaga 81
|||||| ||||
Sbjct: 82 atgaatttaga 72
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa
Indica Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||||||||||||||| ||||||||| ||| | ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatatt 64
|||||||||||||||| ||||||||| ||| | | ||||| ||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 112 aatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||||||||| ||| ||| ||| |||||| ||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaa 129
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 58.0 bits (29), Expect = 4e-08
Identities = 90/109 (82%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 29 aatgtaagtcattcttgcatttctcacattcatattgatt-taatgaatctagatagata 87
|||||||| | |||| ||||| | ||||||||||| || |||||||||||| | | |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 88 tatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
||||||||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaa 109
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 70 aatgaatctagatagatatatatgtctagattcatcaacatcaatatgaatgtggggaat 129
|||||||||||| | |||| | || |||||||||| | ||| ||||||||||||| |||
Sbjct: 78 aatgaatctagacatatatgtgtgcctagattcattagcatagatatgaatgtgggcaat 19
Query: 130 gctagaa 136
|||||||
Sbjct: 18 gctagaa 12
>RF00906;MIR1122;AC145367.2/80971-81106 39947:Oryza sativa Japonica
Group
Length = 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 96 tagattcatcaacatcaatatgaatgtggggaatgctagaa 136
||||||||| |||||| ||||||||||||| ||||||||||
Sbjct: 64 tagattcattaacatctatatgaatgtgggcaatgctagaa 104
Score = 54.0 bits (27), Expect = 7e-07
Identities = 61/71 (85%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 10 agtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-t 68
||||||||||| |||||||| | |||| | |||| ||||| | ||||||||||| ||| |
Sbjct: 134 agtacttcctcagtttcatattataagactttctagcattgcccacattcatatagatgt 75
Query: 69 taatgaatcta 79
|||||||||||
Sbjct: 74 taatgaatcta 64
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttct 52
|||| ||| ||||||||||||||||||||||| ||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcatttct 106
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcattt 50
|||| ||||||||||||||| ||||||||||| ||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattt 43
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcac 55
||||| |||||||||||||||||||||| |||| ||||| |||||
Sbjct: 84 gtactccctccgtttcataatgtaagtctttctagcattgctcac 40
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattct 43
||||||||||||||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttct 36
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 89 atatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttg 148
|||||||||||||||| |||||| | ||||||||||| || |||| || | ||||| |||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattg 21
Query: 149 tgaaa 153
|||||
Sbjct: 20 tgaaa 16
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||| |||||||| | || | || || | ||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcattt 50
||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 117 gtactccctccgtttcacaatgtaagtcattctagcattt 78
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 118 aatgtggggaatgctagaatgacttacgttgtgaaaaagagggagta 164
||||||| |||||||||||||||||| |||||||| |||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 127 aatgctagaatgacttacgttgtgaaaaagagggagtag 165
|||||||||||||||| | |||||||| ||||||||||
Sbjct: 42 aatgctagaatgacttgcattgtgaaacggagggagtag 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcattt 50
|||| ||||||||||| |||| |||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattt 43
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 90 tatgtctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgt 149
|||||||| |||||| | ||| ||||||||||||| |||||||||| | ||||| ||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 150 gaaa 153
||||
Sbjct: 112 gaaa 115
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||| ||||||||| |||||||| | |||| ||||| | |||||||||||
Sbjct: 126 tacttcatccgtttcacaatgtaagactttctagcattgcccacattcatat 75
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacatt 58
|||||||||| |||||||||||||| | |||| ||||| |||||||
Sbjct: 5 tacttcctccatttcataatgtaagactttctagcattgttcacatt 51
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattct 43
|||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattct 36
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttc 51
||||| |||||||||| ||||||||||||||| |||||||
Sbjct: 89 tacttactccgtttcacaatgtaagtcattctagcatttc 50
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 118 aatgtggggaatgctagaatgacttacgttgtgaaa 153
||||| || |||||||||||||||||| ||||||||
Sbjct: 43 aatgtaggaaatgctagaatgacttacattgtgaaa 78
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 85 atatatatgtctagattcatcaacatcaatatgaatgtggggaatgctagaa 136
|||| |||| |||||||| | |||||| ||||||||||||| ||||||||||
Sbjct: 84 atatgtatgcctagattcgttaacatctatatgaatgtgggcaatgctagaa 33
Score = 52.0 bits (26), Expect = 3e-06
Identities = 60/70 (85%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||||||||||||||||| | |||| | |||| ||||| | ||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 71 atgaatctag 80
| ||||||||
Sbjct: 65 acgaatctag 74
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattct 43
|||||||||||||||| |||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattct 36
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 129 tgctagaatgacttacgttgtgaaaaagagggagtagcaa 168
|||||||||||||||| |||||||| |||| ||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtagcaa 1
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
||||||||||| |||||| ||| |||||||| |||||||||| | ||||| || |||||
Sbjct: 75 tctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 154 aagagggagtag 165
||||||||||
Sbjct: 15 ctgagggagtag 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatat 63
|||||||||| |||||||||||||| | |||| ||||| | |||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
Score = 46.1 bits (23), Expect = 2e-04
Identities = 60/71 (84%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| |||| ||||||||||||||| | |||| ||||| | |||||| ||| ||| |||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 71 atgaatctaga 81
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattct 43
|||| |||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattct 36
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat 67
|||| ||||| ||||||||| ||||||||||| |||||| || ||| ||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgat 84
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| |||||||| |||| | ||||| |||| || ||||| ||| ||
Sbjct: 138 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 79
Query: 70 aatgaat 76
|||||||
Sbjct: 78 aatgaat 72
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 54.0 bits (27), Expect = 7e-07
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 11 gtacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tt 69
||||||||||||||||| |||||||| |||| | ||||| |||| || ||||| ||| ||
Sbjct: 4 gtacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtt 63
Query: 70 aatgaat 76
|||||||
Sbjct: 64 aatgaat 70
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 94 tctagattcatcaacatcaatatgaatgtggggaatgctagaatgacttacgttgtgaaa 153
|||||||| || |||||| |||||||||||| |||||||||| | ||||| || |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 154 aagagggagta 164
|||||||||
Sbjct: 15 tggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 62/73 (84%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatttctcacattcatattgat-tta 70
|||| ||||| |||||||||||||| | |||| ||||| ||||||||||| ||| |||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 71 atgaatctagata 83
|| ||||||||||
Sbjct: 65 ataaatctagata 77
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccgtttcataatgtaagtcattcttgcatt 49
|||| |||||||||||||||||||| | |||| |||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
