miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48855_osa-miR166l:pmrd
Length = 117
Score = 232 bits (117), Expect = 5e-62
Identities = 117/117 (100%)
Strand = Plus / Plus
Query: 1 gttaggttaaggggattgttgtctggttcaaggtctccacattgtgcaaaatgttcattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttaggttaaggggattgttgtctggttcaaggtctccacattgtgcaaaatgttcattc 60
Query: 61 atggaggcacaggatgcttggtgatctcggaccaggcttcaatccctttaaccagca 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggaggcacaggatgcttggtgatctcggaccaggcttcaatccctttaaccagca 117
>54966_zma-miR166j:pmrd
Length = 154
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 78 ttggtgatctcggaccaggcttcaatccctttaac 112
|||||||||||||||||||||||||||||||||||
Sbjct: 106 ttggtgatctcggaccaggcttcaatccctttaac 140
Score = 50.1 bits (25), Expect = 4e-07
Identities = 38/41 (92%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 2 ttaggttaaggggattgtt-gtctggttcaaggtctccaca 41
||||||||||||| ||||| ||||||||||||||| |||||
Sbjct: 12 ttaggttaaggggtttgtttgtctggttcaaggtcgccaca 52
>54420_sbi-miR166e:pmrd
Length = 151
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccctttaaccagca 117
|||||||||||||||||||||||||||||| ||||
Sbjct: 108 gatctcggaccaggcttcaatccctttaactagca 142
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 1 gttaggttaaggggattgttgtctggttcaaggtctccaca 41
|||||||||| ||| |||||||||||||||||||| |||||
Sbjct: 11 gttaggttaatggggttgttgtctggttcaaggtcgccaca 51
>48856_osa-miR166m:pmrd
Length = 200
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 79 tggtgatctcggaccaggcttcaatccctttaaccagca 117
|||||| |||||||||||||||| |||||||||||||||
Sbjct: 139 tggtgacctcggaccaggcttcattccctttaaccagca 177
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 5 ggttaaggggattgttgtctggttcaaggtctcc 38
|||||||||| |||||||||||||||||| ||||
Sbjct: 30 ggttaaggggtttgttgtctggttcaaggcctcc 63
>48854_osa-miR166k:pmrd
Length = 127
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 86 ctcggaccaggcttcaatccctttaacca 114
|||||||||||||||||||||||||||||
Sbjct: 96 ctcggaccaggcttcaatccctttaacca 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggttaaggggattgttgtctgg 26
||||||||||||| |||||||||||
Sbjct: 2 ttaggttaaggggtttgttgtctgg 26
>54422_sbi-miR166g:pmrd
Length = 134
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcaatccctttaacca 114
||||||||||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcaatccctttaacca 122
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 ttaggttaaggggattgttgtctgg 26
|||||||| ||||||||||||||||
Sbjct: 12 ttaggttagggggattgttgtctgg 36
>54967_zma-miR166k:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 tcggaccaggcttcaatccctttaacca 114
||||||||||||||||||||||| ||||
Sbjct: 129 tcggaccaggcttcaatccctttgacca 156
>51631_ptc-miR166g:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 81 gtgatctcggaccaggcttcaatccc 106
||||||||||||||||||||| ||||
Sbjct: 68 gtgatctcggaccaggcttcattccc 93
>54970_zma-miR166n:pmrd
Length = 96
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 69 tgatctcggaccaggcttcattccc 93
>54959_zma-miR166c:pmrd
Length = 92
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 67 tgatctcggaccaggcttcattccc 91
>54796_vvi-miR166h:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 64 tgatctcggaccaggcttcattccc 88
>54419_sbi-miR166d:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 62 tgatctcggaccaggcttcattccc 86
>54416_sbi-miR166a:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tgttgtctggttcaaggtctc 37
|||||||||||||||||||||
Sbjct: 7 tgttgtctggttcaaggtctc 27
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 84 gatctcggaccaggcttcattccc 107
>51632_ptc-miR166h:pmrd
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 67 tgatctcggaccaggcttcattccc 91
>48847_osa-miR166d:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 86 tgatctcggaccaggcttcattccc 110
>48844_osa-miR166a:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tgttgtctggttcaaggtctc 37
|||||||||||||||||||||
Sbjct: 26 tgttgtctggttcaaggtctc 46
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 106 gatctcggaccaggcttcattccc 129
>48713_mtr-miR166c:pmrd
Length = 171
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 81 gtgatctcggaccaggcttca 101
|||||||||||||||||||||
Sbjct: 145 gtgatctcggaccaggcttca 165
>48711_mtr-miR165:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttcaatccc 106
|||||||||||||||||||| ||||
Sbjct: 57 tgatctcggaccaggcttcattccc 81
>54973_zma-miR166q:pmrd
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 65 gatctcggaccaggcttcattccc 88
>54972_zma-miR166p:pmrd
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 67 gatctcggaccaggcttcattccc 90
>54961_zma-miR166e:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 63 gatctcggaccaggcttcattccc 86
>54960_zma-miR166d:pmrd
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tgttgtctggttcaaggtct 36
||||||||||||||||||||
Sbjct: 7 tgttgtctggttcaaggtct 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 80 gatctcggaccaggcttcattccc 103
>54958_zma-miR166b:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 tgttgtctggttcaaggtct 36
||||||||||||||||||||
Sbjct: 7 tgttgtctggttcaaggtct 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 92 gatctcggaccaggcttcattccc 115
>54957_zma-miR166a:pmrd
Length = 213
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 185 gatctcggaccaggcttcattccc 208
>54789_vvi-miR166a:pmrd
Length = 130
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttca 101
||||||||||||||||||||
Sbjct: 95 tgatctcggaccaggcttca 114
>54423_sbi-miR166h:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 158 gatctcggaccaggcttcattccc 181
>51639_ptc-miR166o:pmrd
Length = 324
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttca 101
||||||||||||||||||||
Sbjct: 291 tgatctcggaccaggcttca 310
>51638_ptc-miR166n:pmrd
Length = 331
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 82 tgatctcggaccaggcttca 101
||||||||||||||||||||
Sbjct: 298 tgatctcggaccaggcttca 317
>48845_osa-miR166b:pmrd
Length = 206
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 gatctcggaccaggcttcaatccc 106
||||||||||||||||||| ||||
Sbjct: 164 gatctcggaccaggcttcattccc 187
