miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48879_osa-miR169d:pmrd
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 atttatcgtgtagccaaggatgaattgccggcgtttcacgctgttgatggtgcgtgcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttatcgtgtagccaaggatgaattgccggcgtttcacgctgttgatggtgcgtgcata 60
Query: 61 tataagttggcgccggcaagtcatttcaggctacatgtttgcc 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tataagttggcgccggcaagtcatttcaggctacatgtttgcc 103
>54824_vvi-miR169v:pmrd
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 agccaaggatgaattgccggcg 33
||||||||||||||||||||||
Sbjct: 13 agccaaggatgaattgccggcg 34
>48880_osa-miR169e:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 8 gtgtagccaaggatgaattgccggc 32
|||||||||||||||| ||||||||
Sbjct: 8 gtgtagccaaggatgacttgccggc 32
>55018_zma-miR169p:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgtagccaaggatgaattgccggc 32
||||||||||||||| ||||||||
Sbjct: 1 tgtagccaaggatgacttgccggc 24
>54446_sbi-miR169j:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 9 tgtagccaaggatgaattgccggc 32
||||||||||||||| ||||||||
Sbjct: 1 tgtagccaaggatgacttgccggc 24
>48561_gma-miR169a:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 12 agccaaggatgaattgccggcgtt 35
|||||||||||| |||||||||||
Sbjct: 22 agccaaggatgacttgccggcgtt 45
