miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00865;MIR169_5;AAAA02026107.1/14351-14478 39946:Oryza sativa
Indica Group
Length = 128
Score = 214 bits (108), Expect = 2e-55
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 1 ccactcaggctagccaaggagactgcccatgaaccagcttaaaggatcattaaattgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ccactcaggctagccaaggagactgcccatgaaccagcttaaaggatcattaaattgcta 70
Query: 61 atccttcagggaggacacaggcaagtcatccttggctatcagagataa 108
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atccttcagggaggacacaggcaagtcatccttggctatcagagataa 118
>RF00645;MIR169_2;AAAA02026107.1/14467-14357 39946:Oryza sativa
Indica Group
Length = 111
Score = 212 bits (107), Expect = 7e-55
Identities = 107/107 (100%)
Strand = Plus / Minus
Query: 1 ccactcaggctagccaaggagactgcccatgaaccagcttaaaggatcattaaattgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ccactcaggctagccaaggagactgcccatgaaccagcttaaaggatcattaaattgcta 48
Query: 61 atccttcagggaggacacaggcaagtcatccttggctatcagagata 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atccttcagggaggacacaggcaagtcatccttggctatcagagata 1
>RF00865;MIR169_5;AK240880.1/275-135 39947:Oryza sativa Japonica
Group
Length = 141
Score = 69.9 bits (35), Expect = 6e-12
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Plus
Query: 2 cactcaggctagccaaggagactgcccatg-aaccagcttaaaggatcatt 51
|||||||||||||||||||||||||||||| |||| ||| |||||||||||
Sbjct: 12 cactcaggctagccaaggagactgcccatgaaacctgctgaaaggatcatt 62
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 72 aggacacaggcaagtcatccttggctatcagag 104
||||||||||||||||||||||||||| |||||
Sbjct: 95 aggacacaggcaagtcatccttggctaccagag 127
>RF00645;MIR169_2;CT835986.1/139-261 39946:Oryza sativa Indica Group
Length = 123
Score = 69.9 bits (35), Expect = 6e-12
Identities = 48/51 (94%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 2 cactcaggctagccaaggagactgcccatg-aaccagcttaaaggatcatt 51
|||||||||||||||||||||||||||||| |||| ||| |||||||||||
Sbjct: 118 cactcaggctagccaaggagactgcccatgaaacctgctgaaaggatcatt 68
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 72 aggacacaggcaagtcatccttggctatcagag 104
||||||||||||||||||||||||||| |||||
Sbjct: 35 aggacacaggcaagtcatccttggctaccagag 3
>RF00865;MIR169_5;ABXC01005011.1/62536-62662 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 65.9 bits (33), Expect = 1e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 ccactcaggctagccaaggagactgcccatgaaccagcttaaagg 45
||||||||||||||||||||||||||| |||||||| || |||||
Sbjct: 11 ccactcaggctagccaaggagactgcctatgaaccaactcaaagg 55
>RF00645;MIR169_2;ABXC01005012.1/1911-1797 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 65.9 bits (33), Expect = 1e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 72 aggacacaggcaagtcatccttggctatcagag 104
|||||||||||||||||||||||||||||||||
Sbjct: 36 aggacacaggcaagtcatccttggctatcagag 4
Score = 63.9 bits (32), Expect = 4e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 1 ccactcaggctagccaaggagactgcccatgaacca 36
||||||||||||||||||||||||||| ||||||||
Sbjct: 111 ccactcaggctagccaaggagactgcctatgaacca 76
>RF00865;MIR169_5;AP004464.3/58814-58687 39947:Oryza sativa Japonica
Group
Length = 128
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 72 aggacacaggcaagtcatccttggctatcagag 104
||||||||||||||||||||||||||| |||||
Sbjct: 82 aggacacaggcaagtcatccttggctaccagag 114
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 3 actcaggctagccaaggagactgcccatgaaccag 37
|||||| |||||||||||||||||| |||||||||
Sbjct: 13 actcagactagccaaggagactgcctatgaaccag 47
>RF00645;MIR169_2;AP004464.3/58694-58808 39947:Oryza sativa Japonica
Group
Length = 115
Score = 58.0 bits (29), Expect = 2e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 72 aggacacaggcaagtcatccttggctatcagag 104
||||||||||||||||||||||||||| |||||
Sbjct: 40 aggacacaggcaagtcatccttggctaccagag 8
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 3 actcaggctagccaaggagactgcccatgaaccag 37
|||||| |||||||||||||||||| |||||||||
Sbjct: 109 actcagactagccaaggagactgcctatgaaccag 75
>RF00865;MIR169_5;ABXC01005012.1/10458-10330 4558:Sorghum bicolor
(sorghum)
Length = 129
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 5 tcaggctagccaaggagactgcccatga 32
||||||||||||||||||||||||||||
Sbjct: 15 tcaggctagccaaggagactgcccatga 42
>RF00645;MIR169_2;ABXC01005012.1/10344-10452 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 5 tcaggctagccaaggagactgcccatga 32
||||||||||||||||||||||||||||
Sbjct: 101 tcaggctagccaaggagactgcccatga 74
>RF00865;MIR169_5;EU968670.1/235-103 4577:Zea mays
Length = 133
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 70 ggaggacacaggcaagtcatccttggctatcagag 104
||||| ||||||||||||||||||||||| |||||
Sbjct: 85 ggaggccacaggcaagtcatccttggctaccagag 119
>RF00865;MIR169_5;ABXC01001464.1/179344-179197 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 70 ggaggacacaggcaagtcatccttggctatcagag 104
||||| ||||||||||||||||||||||| |||||
Sbjct: 100 ggaggccacaggcaagtcatccttggctaccagag 134
>RF00865;MIR169_5;AACV01009625.1/5578-5722 39947:Oryza sativa
Japonica Group
Length = 145
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 ccactcaggctagccaaggagactgcc 27
|||||||||||||||||||||||||||
Sbjct: 11 ccactcaggctagccaaggagactgcc 37
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 aggcaagtcatccttggctatcagag 104
|||||||||||||||||||| |||||
Sbjct: 106 aggcaagtcatccttggctaccagag 131
>RF00645;MIR169_2;EU968670.1/110-229 4577:Zea mays
Length = 120
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 70 ggaggacacaggcaagtcatccttggctatcagag 104
||||| ||||||||||||||||||||||| |||||
Sbjct: 42 ggaggccacaggcaagtcatccttggctaccagag 8
>RF00645;MIR169_2;ABXC01001464.1/179202-179340 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 54.0 bits (27), Expect = 4e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 70 ggaggacacaggcaagtcatccttggctatcagag 104
||||| ||||||||||||||||||||||| |||||
Sbjct: 44 ggaggccacaggcaagtcatccttggctaccagag 10
>RF00645;MIR169_2;AP008210.1/19428619-19428750 39947:Oryza sativa
Japonica Group
Length = 132
Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 1 ccactcaggctagccaaggagactgcc 27
|||||||||||||||||||||||||||
Sbjct: 128 ccactcaggctagccaaggagactgcc 102
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 79 aggcaagtcatccttggctatcagag 104
|||||||||||||||||||| |||||
Sbjct: 33 aggcaagtcatccttggctaccagag 8
>RF00865;MIR169_5;AASG02003941.1/7918-8066 3988:Ricinus communis
(castor bean)
Length = 149
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctatcaga 103
||||||||||||||||||||||||||
Sbjct: 110 caggcaagtcatccttggctatcaga 135
>RF00865;MIR169_5;CAAP02000001.1/222751-222589 29760:Vitis vinifera
Length = 163
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctatcaga 103
||||||||||||||||||||||||||
Sbjct: 124 caggcaagtcatccttggctatcaga 149
>RF00865;MIR169_5;ABXC01001464.1/182182-182031 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 gaggacacaggcaagtcatccttggctatc 100
|||| |||||||||||||||||||||||||
Sbjct: 106 gaggccacaggcaagtcatccttggctatc 135
>RF00865;MIR169_5;ABXC01005012.1/7179-7306 4558:Sorghum bicolor
(sorghum)
Length = 128
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 tcaggctagccaaggagactgcccat 30
||||||||||||||||||||||||||
Sbjct: 15 tcaggctagccaaggagactgcccat 40
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 55 ttgctaatccttcagggaggacacaggcaagtcatccttggctatcaga 103
||||| |||||| || ||||| | |||||||||||||||||||| ||||
Sbjct: 66 ttgctgatcctttagagaggatataggcaagtcatccttggctaccaga 114
>RF00865;MIR169_5;AACV01020369.1/3584-3757 39947:Oryza sativa
Japonica Group
Length = 174
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 71 gaggacacaggcaagtcatccttggctatc 100
|||| |||||||||||||||||||||||||
Sbjct: 128 gaggccacaggcaagtcatccttggctatc 157
>RF00865;MIR169_5;AY551246.1/188-45 4530:Oryza sativa (rice)
Length = 144
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 74 gacacaggcaagtcatccttggctatcaga 103
||||||||||||||||||||||||| ||||
Sbjct: 100 gacacaggcaagtcatccttggctaccaga 129
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 4 ctcaggctagccaaggagactgcc 27
||||||||||||||||||||||||
Sbjct: 14 ctcaggctagccaaggagactgcc 37
>RF00645;MIR169_2;AASG02003941.1/8059-7924 3988:Ricinus communis
(castor bean)
Length = 136
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctatcaga 103
||||||||||||||||||||||||||
Sbjct: 33 caggcaagtcatccttggctatcaga 8
>RF00645;MIR169_2;AM487000.2/29208-29357 29760:Vitis vinifera
Length = 150
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctatcaga 103
||||||||||||||||||||||||||
Sbjct: 33 caggcaagtcatccttggctatcaga 8
>RF00645;MIR169_2;ABXC01001464.1/182038-182176 4558:Sorghum bicolor
(sorghum)
Length = 139
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 gaggacacaggcaagtcatccttggctatc 100
|||| |||||||||||||||||||||||||
Sbjct: 40 gaggccacaggcaagtcatccttggctatc 11
>RF00645;MIR169_2;ABXC01005012.1/7295-7185 4558:Sorghum bicolor
(sorghum)
Length = 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 5 tcaggctagccaaggagactgcccat 30
||||||||||||||||||||||||||
Sbjct: 103 tcaggctagccaaggagactgcccat 78
Score = 50.1 bits (25), Expect = 6e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 55 ttgctaatccttcagggaggacacaggcaagtcatccttggctatcaga 103
||||| |||||| || ||||| | |||||||||||||||||||| ||||
Sbjct: 52 ttgctgatcctttagagaggatataggcaagtcatccttggctaccaga 4
>RF00645;MIR169_2;AC137595.2/89199-89329 39947:Oryza sativa Japonica
Group
Length = 131
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 74 gacacaggcaagtcatccttggctatcaga 103
||||||||||||||||||||||||| ||||
Sbjct: 38 gacacaggcaagtcatccttggctaccaga 9
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 4 ctcaggctagccaaggagactgcc 27
||||||||||||||||||||||||
Sbjct: 124 ctcaggctagccaaggagactgcc 101
>RF00645;MIR169_2;AY551243.1/20-180 4530:Oryza sativa (rice)
Length = 161
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 71 gaggacacaggcaagtcatccttggctatc 100
|||| |||||||||||||||||||||||||
Sbjct: 40 gaggccacaggcaagtcatccttggctatc 11
>RF00865;MIR169_5;AASG02006505.1/277-428 3988:Ricinus communis
(castor bean)
Length = 152
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 69 gggaggacacaggcaagtcatccttggctatca 101
||||||| | |||||||||||||||||||||||
Sbjct: 103 gggaggaaataggcaagtcatccttggctatca 135
>RF00865;MIR169_5;BT061088.1/1092-1244 4577:Zea mays
Length = 153
Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 76 cacaggcaagtcatccttggctatc 100
|||||||||||||||||||||||||
Sbjct: 112 cacaggcaagtcatccttggctatc 136
>RF00645;MIR169_2;AASG02006505.1/420-283 3988:Ricinus communis
(castor bean)
Length = 138
Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 69 gggaggacacaggcaagtcatccttggctatca 101
||||||| | |||||||||||||||||||||||
Sbjct: 42 gggaggaaataggcaagtcatccttggctatca 10
>RF00865;MIR169_5;AARH01000583.1/30355-30198 3694:Populus
trichocarpa
Length = 158
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctatca 101
||||||||||||||||||||||||
Sbjct: 119 caggcaagtcatccttggctatca 142
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 tcaggctagccaaggagactgcc 27
|||||||||||||||||||||||
Sbjct: 15 tcaggctagccaaggagactgcc 37
>RF00865;MIR169_5;AARH01009234.1/70247-70410 3694:Populus
trichocarpa
Length = 164
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctatca 101
||||||||||||||||||||||||
Sbjct: 125 caggcaagtcatccttggctatca 148
>RF00865;MIR169_5;AASG02003632.1/18586-18737 3988:Ricinus communis
(castor bean)
Length = 152
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctatca 101
||||||||||||||||||||||||
Sbjct: 113 caggcaagtcatccttggctatca 136
>RF00645;MIR169_2;AARH01000583.1/30205-30349 3694:Populus
trichocarpa
Length = 145
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctatca 101
||||||||||||||||||||||||
Sbjct: 33 caggcaagtcatccttggctatca 10
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 5 tcaggctagccaaggagactgcc 27
|||||||||||||||||||||||
Sbjct: 137 tcaggctagccaaggagactgcc 115
>RF00645;MIR169_2;AC216452.1/111514-111664 3694:Populus trichocarpa
Length = 151
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctatca 101
||||||||||||||||||||||||
Sbjct: 33 caggcaagtcatccttggctatca 10
>RF00645;MIR169_2;AASG02003632.1/18730-18592 3988:Ricinus communis
(castor bean)
Length = 139
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctatca 101
||||||||||||||||||||||||
Sbjct: 33 caggcaagtcatccttggctatca 10
>RF00865;MIR169_5;ABIM01022203.1/1489-1639 3649:Carica papaya
(papaya)
Length = 151
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctatc 100
|||||||||||||||||||||||
Sbjct: 112 caggcaagtcatccttggctatc 134
>RF00865;MIR169_5;CU468266.5/4267-4422 3880:Medicago truncatula
(barrel medic)
Length = 156
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 79 aggcaagtcatccttggctatca 101
|||||||||||||||||||||||
Sbjct: 117 aggcaagtcatccttggctatca 139
>RF00645;MIR169_2;ABIM01014270.1/4373-4157 3649:Carica papaya
(papaya)
Length = 217
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 73 ggacacaggcaagtcatccttggctatcaga 103
|||| ||||||||||||||||||||| ||||
Sbjct: 39 ggacgcaggcaagtcatccttggctaccaga 9
>RF00645;MIR169_2;ABIM01022203.1/1632-1495 3649:Carica papaya
(papaya)
Length = 138
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctatc 100
|||||||||||||||||||||||
Sbjct: 33 caggcaagtcatccttggctatc 11
>RF00645;MIR169_2;AARH01001852.1/3885-3676 3694:Populus
trichocarpa
Length = 210
Score = 46.1 bits (23), Expect = 9e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 68 agggaggacacaggcaagtcatccttggcta 98
||||||| ||||||||||||||||||||||
Sbjct: 43 agggaggctacaggcaagtcatccttggcta 13
>RF00645;MIR169_2;CU468266.5/4414-4273 3880:Medicago truncatula
(barrel medic)
Length = 142
Score = 46.1 bits (23), Expect = 9e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 79 aggcaagtcatccttggctatca 101
|||||||||||||||||||||||
Sbjct: 32 aggcaagtcatccttggctatca 10
>RF00645;MIR169_2;ABXC01005011.1/62641-62556 4558:Sorghum bicolor
(sorghum)
Length = 86
Score = 46.1 bits (23), Expect = 9e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 11 tagccaaggagactgcccatgaaccagcttaaagg 45
||||||||||||||||| |||||||| || |||||
Sbjct: 86 tagccaaggagactgcctatgaaccaactcaaagg 52
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 72 aggacacaggcaagtcatccttggct 97
|||||| |||||||||||||||||||
Sbjct: 26 aggacataggcaagtcatccttggct 1
>RF00865;MIR169_5;AY551203.1/210-25 3702:Arabidopsis thaliana (thale
cress)
Length = 186
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 caggcaagtcatccttggctat 99
||||||||||||||||||||||
Sbjct: 147 caggcaagtcatccttggctat 168
>RF00865;MIR169_5;AB016889.1/44658-44824 3702:Arabidopsis thaliana
(thale cress)
Length = 167
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 77 acaggcaagtcatccttggcta 98
||||||||||||||||||||||
Sbjct: 127 acaggcaagtcatccttggcta 148
>RF00865;MIR169_5;AASG02003941.1/7647-7771 3988:Ricinus communis
(castor bean)
Length = 125
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 80 ggcaagtcatccttggctatca 101
||||||||||||||||||||||
Sbjct: 88 ggcaagtcatccttggctatca 109
>RF00865;MIR169_5;ABXC01000010.1/150949-151088 4558:Sorghum bicolor
(sorghum)
Length = 140
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 77 acaggcaagtcatccttggctatcagagat 106
|||||||| |||||||||||||||| ||||
Sbjct: 99 acaggcaaatcatccttggctatcaaagat 128
>RF00865;MIR169_5;ABXC01000010.1/151290-151438 4558:Sorghum bicolor
(sorghum)
Length = 149
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 77 acaggcaagtcatccttggctatcagagat 106
|||||||| ||||||||||||| |||||||
Sbjct: 108 acaggcaaatcatccttggctaacagagat 137
>RF00865;MIR169_5;AACV01018924.1/12529-12684 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 77 acaggcaagtcatccttggcta 98
||||||||||||||||||||||
Sbjct: 116 acaggcaagtcatccttggcta 137
>RF00645;MIR169_2;AB016889.1/44816-44664 3702:Arabidopsis thaliana
(thale cress)
Length = 153
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 77 acaggcaagtcatccttggcta 98
||||||||||||||||||||||
Sbjct: 33 acaggcaagtcatccttggcta 12
>RF00645;MIR169_2;AY551203.1/30-206 3702:Arabidopsis thaliana
(thale cress)
Length = 177
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 78 caggcaagtcatccttggctat 99
||||||||||||||||||||||
Sbjct: 35 caggcaagtcatccttggctat 14
>RF00645;MIR169_2;AASG02003941.1/7763-7653 3988:Ricinus communis
(castor bean)
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 80 ggcaagtcatccttggctatca 101
||||||||||||||||||||||
Sbjct: 30 ggcaagtcatccttggctatca 9
>RF00645;MIR169_2;BT061088.1/1224-1114 4577:Zea mays
Length = 111
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 76 cacaggcaagtcatccttggct 97
||||||||||||||||||||||
Sbjct: 22 cacaggcaagtcatccttggct 1
>RF00645;MIR169_2;BT062831.1/323-237 4577:Zea mays
Length = 87
Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 72 aggacacaggcaagtcatccttggct 97
|||||| |||||||||||||||||||
Sbjct: 26 aggacataggcaagtcatccttggct 1
>RF00645;MIR169_2;ABXC01000010.1/151431-151296 4558:Sorghum bicolor
(sorghum)
Length = 136
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 77 acaggcaagtcatccttggctatcagagat 106
|||||||| ||||||||||||| |||||||
Sbjct: 35 acaggcaaatcatccttggctaacagagat 6
>RF00645;MIR169_2;ABXC01000010.1/151081-150955 4558:Sorghum bicolor
(sorghum)
Length = 127
Score = 44.1 bits (22), Expect = 4e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 77 acaggcaagtcatccttggctatcagagat 106
|||||||| |||||||||||||||| ||||
Sbjct: 35 acaggcaaatcatccttggctatcaaagat 6
>RF00645;MIR169_2;AP008214.1/26806653-26806795 39947:Oryza sativa
Japonica Group
Length = 143
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 77 acaggcaagtcatccttggcta 98
||||||||||||||||||||||
Sbjct: 34 acaggcaagtcatccttggcta 13
