miRNEST 2.0, an integrative microRNA resource :: BLAST
>42814_zma-MIR396h:mirbase
Length = 124
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 1 ctttgtggtcttccacagctttcttgaactgcatct 36
||||||| ||||||||||||||||||||||||||||
Sbjct: 108 ctttgtgatcttccacagctttcttgaactgcatct 73
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 84 tgcagttcaataaagctgtgggaa 107
||||||||||||||||||||||||
Sbjct: 24 tgcagttcaataaagctgtgggaa 1
>42808_zma-MIR396b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ctttgtggtcttccacagctttcttgaactgcatct 36
||||||| ||||||||||||||||||||||||||||
Sbjct: 11 ctttgtgatcttccacagctttcttgaactgcatct 46
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 84 tgcagttcaataaagctgtgggaaa 108
|||||||||||||||||||||||||
Sbjct: 95 tgcagttcaataaagctgtgggaaa 119
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ctttgtggtcttccacagctttcttgaactgcatct 36
||||||| ||||||||||||||||||||||||||||
Sbjct: 11 ctttgtgatcttccacagctttcttgaactgcatct 46
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 gtgcagttcaataaagctgtgggaaa 108
||||||||||||||||||||||||||
Sbjct: 86 gtgcagttcaataaagctgtgggaaa 111
>42461_sof-MIR396:mirbase
Length = 134
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 1 ctttgtggtcttccacagctttcttgaactgcatct 36
||||||| ||||||||||||||||||||||||||||
Sbjct: 11 ctttgtgatcttccacagctttcttgaactgcatct 46
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 83 gtgcagttcaataaagctgtgggaaa 108
||||||||||||||||||||||||||
Sbjct: 92 gtgcagttcaataaagctgtgggaaa 117
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 73 ttgcacgagtgtgcagttcaataaagctgtgggaaattacagag 116
||||||||| | |||||||||||||||||||||||||| |||||
Sbjct: 87 ttgcacgagagggcagttcaataaagctgtgggaaatttcagag 130
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tgtggtcttccacagctttcttgaactgc 32
|||| ||||||||||||||||||||||||
Sbjct: 26 tgtgatcttccacagctttcttgaactgc 54
>42026_osa-MIR396a:mirbase
Length = 154
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 ctttgtggtcttccacagctttcttgaactgca 33
||||||| |||||||||||||||||||||||||
Sbjct: 1 ctttgtgatcttccacagctttcttgaactgca 33
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 85 gcagttcaataaagctgtgggaaattacagag 116
|||||||||||||||||||||||||| |||||
Sbjct: 123 gcagttcaataaagctgtgggaaattgcagag 154
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 85 gcagttcaataaagctgtgggaaattacagag 116
|||||||||||||||||||||||||| |||||
Sbjct: 85 gcagttcaataaagctgtgggaaattgcagag 116
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 gtcttccacagctttcttgaactgcat 34
|||||||||||||||||||||||||||
Sbjct: 18 gtcttccacagctttcttgaactgcat 44
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgcatct 36
||||||||||||||||||||||||||||
Sbjct: 31 tcttccacagctttcttgaactgcatct 58
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 83 gtgcagttcaataaagctgtgggaaattacagag 116
|||| ||||||||||||||||||||||| |||||
Sbjct: 96 gtgctgttcaataaagctgtgggaaattgcagag 129
>42813_zma-MIR396g:mirbase
Length = 114
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 tcttccacagctttcttgaactgcatc 35
|||||||||||||||||||||||||||
Sbjct: 113 tcttccacagctttcttgaactgcatc 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 85 gcagttcaataaagctgtgggaa 107
|||||||||||||||||||||||
Sbjct: 23 gcagttcaataaagctgtgggaa 1
>42807_zma-MIR396a:mirbase
Length = 137
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 8 gtcttccacagctttcttgaactgcat 34
|||||||||||||||||||||||||||
Sbjct: 18 gtcttccacagctttcttgaactgcat 44
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 85 gcagttcaataaagctgtgggaaa 108
||||||||||||||||||||||||
Sbjct: 97 gcagttcaataaagctgtgggaaa 120
>41241_csi-MIR396a:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1 ctttgtggtcttccacagctttcttgaactg 31
||||||| |||||||||||||||||||||||
Sbjct: 11 ctttgtgatcttccacagctttcttgaactg 41
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgcatc 35
|||||||||||||||||||||||||||
Sbjct: 4 tcttccacagctttcttgaactgcatc 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 72 gttcaataaagctgtgggaa 91
>40473_gma-MIR396a:mirbase
Length = 140
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgcatc 35
|||||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgcatc 45
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 103 gttcaataaagctgtgggaa 122
>42472_ssp-MIR396:mirbase
Length = 95
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaactgcatct 36
||||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatct 26
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 83 gtgcagttcaataaagctgtggga 106
||||||||||||||||||||||||
Sbjct: 72 gtgcagttcaataaagctgtggga 95
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgcat 34
||||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgcat 34
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 90 gttcaataaagctgtgggaa 109
>40646_lja-MIR396:mirbase
Length = 108
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgcat 34
||||||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaactgcat 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 76 gttcaataaagctgtgggaa 95
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgca 33
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 106 gttcaataaagctgtgggaa 125
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgca 33
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 97 gttcaataaagctgtgggaa 116
>41242_csi-MIR396b:mirbase
Length = 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaactgcatc 35
|||||||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaactgcatc 44
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 87 gttcaataaagctgtgggaa 106
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgca 33
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 107 gttcaataaagctgtgggaa 126
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgca 33
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 107 gttcaataaagctgtgggaa 126
>40085_ath-MIR396a:mirbase
Length = 151
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgca 33
|||||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 123 gttcaataaagctgtgggaa 142
>39877_aly-MIR396a:mirbase
Length = 172
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgca 33
|||||||||||||||||||||||||
Sbjct: 22 tcttccacagctttcttgaactgca 46
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaa 107
||||||||||||||||||||
Sbjct: 133 gttcaataaagctgtgggaa 152
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 tgtggtcttccacagctttcttgaactg 31
|||| |||||||||||||||||||||||
Sbjct: 4 tgtgatcttccacagctttcttgaactg 31
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaactgcat 34
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gttcaataaagctgtgggaaa 108
|||||||||||||||||||||
Sbjct: 102 gttcaataaagctgtgggaaa 122
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactgc 32
||||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactgc 42
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 tgcagttcaataaagctgtgggaa 107
||||||||||||||||||||||||
Sbjct: 109 tgcagttcaataaagctgtgggaa 132
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 ctttgtggtcttccacagctttcttgaactg 31
||||||| | |||||||||||||||||||||
Sbjct: 11 ctttgtgattttccacagctttcttgaactg 41
>40477_gma-MIR396e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaactg 31
|||||||||||||||||||||||
Sbjct: 5 tcttccacagctttcttgaactg 27
>39379_pab-MIR396a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 tcttccacagctttcttgaact 30
||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaact 35
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40296_bna-MIR396a:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>40086_ath-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39878_aly-MIR396b:mirbase
Length = 188
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 ttccacagctttcttgaact 30
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
