miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 242 bits (122), Expect = 1e-63
Identities = 146/154 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 184 bits (93), Expect = 3e-46
Identities = 141/157 (89%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| ||| |||| |||||||||||||| ||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | ||||||||||||||| |||||||| |||||| ||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||||||||| ||||||||| ||||| ||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtaca 3
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 234 bits (118), Expect = 3e-61
Identities = 145/154 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| |||||||||||||||||| ||||||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | ||||||||||||||| | |||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||| ||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 228 bits (115), Expect = 2e-59
Identities = 145/155 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| |||||||||| ||||||||||||| ||||||||||| ||| |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtac 4
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | |||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 226 bits (114), Expect = 8e-59
Identities = 144/154 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | | |||||||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 226 bits (114), Expect = 8e-59
Identities = 144/154 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 180 bits (91), Expect = 4e-45
Identities = 139/155 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | ||||||||||||||| |||||||||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||| ||||||||| ||||||||| ||||| |||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 224 bits (113), Expect = 3e-58
Identities = 146/157 (92%)
Strand = Plus / Plus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2 acatacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatg 61
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
||||||| ||||||||||||||||||||||||||||||| | ||||||||||| | | ||
Sbjct: 62 ttaatgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaa 121
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||| ||||||||| ||||||||||
Sbjct: 122 atgctagaatgacttatattgtgaaacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||||| | ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | |||||| |||||||| |||||| |||||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 220 bits (111), Expect = 5e-57
Identities = 144/155 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||| ||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||||| ||||||||| |||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtac 4
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| || ||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | |||||||||||||| |||||||||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||| | |||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 144/156 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| || | ||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| ||||||||| ||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagtaca 160
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| |||||| | ||||||||||||||| | ||||||||||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 214 bits (108), Expect = 3e-55
Identities = 144/156 (92%)
Strand = Plus / Plus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| || |
Sbjct: 3 catactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatat 62
Query: 70 taatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaa 129
|||| ||| ||| || |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 63 taataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaa 122
Query: 130 tgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| ||||||||| ||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | ||| ||| ||||| | ||||||||||||| |||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 212 bits (107), Expect = 1e-54
Identities = 144/155 (92%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | ||| |||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||||||| |||||||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagtac 158
Score = 186 bits (94), Expect = 7e-47
Identities = 140/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | || ||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 97 atgaatctaaacatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 145/158 (91%)
Strand = Plus / Minus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| |
Sbjct: 161 acatacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattag 102
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 101 ttaatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaa 42
Query: 129 atgctagaatgacttaaattgtgaaatggagggagtac 166
||| |||||||||||| ||||||||| |||||||||||
Sbjct: 41 atgatagaatgacttacattgtgaaacggagggagtac 4
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| || ||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | |||||||||||||||| ||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 142/154 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
Score = 190 bits (96), Expect = 4e-48
Identities = 141/156 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||||||| |||| ||||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| ||||||||| ||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtaca 3
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 145/158 (91%)
Strand = Plus / Plus
Query: 8 tacatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||||||| ||||| ||||||||||||||||||| |||||||| |||||||||||||| |
Sbjct: 1 tacatactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgtt 60
Query: 68 gttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtggga 127
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 61 gttaatgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtggga 120
Query: 128 aatgctagaatgacttaaattgtgaaatggagggagta 165
|||| | |||||||||| ||| ||||| ||| ||||||
Sbjct: 121 aatggtggaatgacttacattatgaaacggaaggagta 158
Score = 172 bits (87), Expect = 1e-42
Identities = 129/143 (90%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||| ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||
Sbjct: 147 tttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctaga 88
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
| |||||| | ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 87 catatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgact 28
Query: 143 taaattgtgaaatggagggagta 165
|| ||||||||| ||||||||||
Sbjct: 27 tacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 210 bits (106), Expect = 5e-54
Identities = 145/157 (92%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| || |||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 4 atacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 64 aatgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaat 121
Query: 131 gctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||||||||| |||||| || ||||||||||||
Sbjct: 122 gctagaatgacttacattgtggaacggagggagtaca 158
Score = 172 bits (87), Expect = 1e-42
Identities = 138/154 (89%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| || |||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | ||||||||||||| |||||||||| ||||||||||||| | |||||
Sbjct: 96 atgaatctag--acatatatatgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| |||||| || ||||| ||||
Sbjct: 38 ctagaatgacttacattgtggaacggaggaagta 5
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 206 bits (104), Expect = 7e-53
Identities = 143/156 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| | ||||||||||||||||| |||||||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
| | ||||||||| ||||||||| ||||| ||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagtaca 3
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | |||||||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||| | ||||||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| || |||||| ||||||||| ||||||||| ||||||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 167 bits (84), Expect = 6e-41
Identities = 138/156 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | | |||||||||||| |||||||||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| |||||| || ||||||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagggagtaca 160
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| ||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | ||||||||||||||||||||||||| | |||||||||||| ||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 157 bits (79), Expect = 6e-38
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| |||||||||||||| || |||||||| |||| ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||||||| ||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| | | ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||||| ||||||| |||||||||| |||||||||||| || | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 176 bits (89), Expect = 7e-44
Identities = 140/157 (89%)
Strand = Plus / Minus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||| ||||| ||||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct: 161 acatactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatg 102
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
||||||||| |||| | ||||| | ||||||||||||||| ||||||||||| | ||||
Sbjct: 101 ttaatgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaa 42
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||| ||||||||| ||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | ||||||||||||| |||||||||||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||||||| ||||| |||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||||| | ||||||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||| |||| ||||||||| ||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagta 158
Score = 165 bits (83), Expect = 3e-40
Identities = 137/155 (88%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||| |||| |||| ||||||||| |||||| ||||||||| |
Sbjct: 159 atactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgat 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | ||||||||||||||| | ||||||||||||||||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||||||| ||||||||| ||||| ||||
Sbjct: 39 gctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 202 bits (102), Expect = 1e-51
Identities = 141/154 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
| | ||||||||| |||||||| ||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagta 5
Score = 161 bits (81), Expect = 4e-39
Identities = 138/157 (87%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||| |||||||||||| |||||| ||||||| |||||||||||
Sbjct: 4 atactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||||||| | |||| | | ||||||||||||||| ||||||| ||||||||||||
Sbjct: 64 tatgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagtaca 167
|||| ||||||||| |||||||| ||||| ||||||
Sbjct: 124 gctaaaatgacttactttgtgaaacggaggaagtaca 160
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 200 bits (101), Expect = 5e-51
Identities = 144/158 (91%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat----tgat 67
|||||||||| ||||||||||||||||||| |||||||| || ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 68 gttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtggga 127
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 128 aatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||| ||||||||| ||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162
Score = 155 bits (78), Expect = 2e-37
Identities = 139/159 (87%), Gaps = 4/159 (2%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 72 atgaatctagatagatatatatgtctagattcattaacttca----atatgaatgtggga 127
||||||||||| | |||||| | ||||||||||||||| ||| ||||||| || ||
Sbjct: 102 atgaatctagacatatatatctatctagattcattaacatcactatgtatgaatatgcga 43
Query: 128 aatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 196 bits (99), Expect = 7e-50
Identities = 141/154 (91%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|| |||||||||| ||||||||| ||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagggagta 5
Score = 157 bits (79), Expect = 6e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | | |||||| |||||| ||||||| ||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 196 bits (99), Expect = 7e-50
Identities = 141/154 (91%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|| |||||||||| ||||||||| ||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagggagta 156
Score = 157 bits (79), Expect = 6e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | | |||||| |||||| ||||||| ||||| ||||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||| |||||| ||||||| ||||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | ||||||| |||||||||||||||| ||||||||||||||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 180 bits (91), Expect = 4e-45
Identities = 139/155 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| ||||||||| |||||||||||| | || |||||||||||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||| || ||||||||| ||||| |||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 140/155 (90%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| |||||||| ||||||||||| | || ||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| ||||||||||||||||||||||| | |||||||| ||||| |||||
Sbjct: 64 aatgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||||||| ||||||||| ||||||||||
Sbjct: 124 gctaaaatgacttacattgtgaaacggagggagta 158
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||||||||||||||||| ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| ||||||||||||||| | | |||||||||||||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 131/143 (91%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctaga 75
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
|||||||||||||||||||||||||| |||| |||||| | | ||||||||||||||||
Sbjct: 76 tagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgact 135
Query: 143 taaattgtgaaatggagggagta 165
|| ||||||||| ||||||||||
Sbjct: 136 tacattgtgaaacggagggagta 158
Score = 174 bits (88), Expect = 3e-43
Identities = 139/156 (89%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| |||||||||| | |||||| ||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | ||||||||||||||| |||||||||||||| |||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
| |||||||||||| ||||||||| ||| |||||||
Sbjct: 39 ggtagaatgacttacattgtgaaacggaaggagtac 4
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 188 bits (95), Expect = 2e-47
Identities = 139/154 (90%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| ||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 65 atgaatctagata------tatgtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggagta 152
Score = 153 bits (77), Expect = 1e-36
Identities = 136/156 (87%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||| | ||||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||| |||||||||||| | |||||||||||||||||||||
Sbjct: 92 atgaatctagacatatat------ctagattcattagcatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| ||||||||| ||||| ||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtaca 3
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 186 bits (94), Expect = 7e-47
Identities = 106/110 (96%)
Strand = Plus / Plus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatctagatagatatatat 93
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 94 gtctagattcattaacttcaatatgaatgtgggaaatgctagaatgactt 143
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatctagatagatatatat 93
|||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 94 gtctagattcattaacttcaatatgaatgtgggaaatgctagaatgactt 143
||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 186 bits (94), Expect = 7e-47
Identities = 106/110 (96%)
Strand = Plus / Minus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatctagatagatatatat 93
|||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 94 gtctagattcattaacttcaatatgaatgtgggaaatgctagaatgactt 143
|||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Plus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatctagatagatatatat 93
|||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 94 gtctagattcattaacttcaatatgaatgtgggaaatgctagaatgactt 143
| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 180 bits (91), Expect = 4e-45
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||| ||||||||||| ||| ||| ||| |||||||||||||||| ||
Sbjct: 4 atactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatt 62
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 63 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaat 122
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||||||||
Sbjct: 123 attagaatgacttacattgtgaaacggagggagta 157
Score = 165 bits (83), Expect = 3e-40
Identities = 138/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 158 atactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtt 99
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | |||||||||||||| |||||||||||||||||||
Sbjct: 98 aatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaa- 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||| ||||| ||||| ||| ||||||||||
Sbjct: 39 actagaataacttacattgtaaaacggagggagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 180 bits (91), Expect = 4e-45
Identities = 139/154 (90%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||| ||||||| |||||||||||| ||||||| || ||||||||||
Sbjct: 65 atgaatctagatag--gcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 123 ctagaatgacttatattgtgaaacggaggaagta 156
Score = 170 bits (86), Expect = 4e-42
Identities = 140/157 (89%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||| ||||||||| |||||||| |||| || |||||||||||
Sbjct: 157 atacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtt 98
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||||| || | || ||| |||||||||||||| ||||||||||||||||||||
Sbjct: 97 aatgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||||||||| ||||||||| ||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtaca 3
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 180 bits (91), Expect = 4e-45
Identities = 140/155 (90%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||| |
Sbjct: 4 atacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||||||| |||||| ||||||||||||||| | ||||| ||| ||||||||
Sbjct: 64 aatgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaat 122
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
| |||||||||||| ||||||||| ||||||||||
Sbjct: 123 gttagaatgacttacattgtgaaacggagggagta 157
Score = 147 bits (74), Expect = 6e-35
Identities = 135/154 (87%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| || ||||| ||| ||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| |||| | | ||||||||||||| | |||||||||||||| ||||||
Sbjct: 97 atgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| |||| |||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgcgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||| |||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||| |||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagggagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| |||| ||| |||| |||||||||||||||| ||
Sbjct: 159 atactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | ||||||||||||||| ||||||| | | ||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 39 actagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 178 bits (90), Expect = 2e-44
Identities = 137/154 (88%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 89 atgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 178 bits (90), Expect = 2e-44
Identities = 137/154 (88%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | ||||||||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagaca---------ttctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagta 149
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 139/156 (89%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||||| ||| ||||| |||||||||||||||||| || ||||||||||| |||||
Sbjct: 99 gatgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
| || ||||||||| | ||||||| |||||||||||
Sbjct: 39 gataaaatgacttacaatgtgaaacggagggagtac 4
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||| |||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | ||||||| | ||||||||| ||| || ||||||||||||||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 172 bits (87), Expect = 1e-42
Identities = 138/154 (89%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||||| |||||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||| ||||||||||||| |||||||||| | | |||||||||||||||||
Sbjct: 96 atgaatctagat--atatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
| ||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ccagaatgacttatattgtgaaacggaggaagta 5
Score = 159 bits (80), Expect = 2e-38
Identities = 140/159 (88%), Gaps = 2/159 (1%)
Strand = Plus / Plus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||||||| ||||||||| ||||||||| | |||||| ||||||||||| | |||
Sbjct: 2 acatacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatg 61
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
||||||||| |||| | |||||||| |||||||||||||| | | |||||||||| ||
Sbjct: 62 ttaatgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaa 119
Query: 129 atgctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||||||||||| ||||||||| ||||||||||||
Sbjct: 120 atgctagaatgacttacattgtgaaacggagggagtaca 158
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 136/153 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| |||||||| | | |||||||| || ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagt 164
||||||||||||| ||| ||||| |||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagt 157
Score = 137 bits (69), Expect = 6e-32
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaa 76
||||| ||||| ||||||||||||| |||||||| |||||||||||| || |||| ||||
Sbjct: 153 cctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaa 94
Query: 77 tctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctaga 136
|||||| | |||||| | | |||||||| |||| || |||||||| | ||||||||||||
Sbjct: 93 tctagacatatatatctatatagattcactaacctctatatgaatataggaaatgctaga 34
Query: 137 atgacttaaattgtgaaatggagggagta 165
|||||||| ||| ||||| ||||||||||
Sbjct: 33 atgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 124/137 (90%)
Strand = Plus / Plus
Query: 29 aatgtaagtcattttagcattttccacattcatattgatgttaatgaatctagatagata 88
||||||||||||| || ||||| |||||||||||| | |||||||||||||||||| |||
Sbjct: 22 aatgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatata 81
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
|| |||||||||||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct: 82 tagatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacatt 141
Query: 149 gtgaaatggagggagta 165
|||||| ||||||||||
Sbjct: 142 gtgaaacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | ||||||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||| || || ||| ||||||
Sbjct: 38 ttagaatgacttacattatggaacggaaggagta 5
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 167 bits (84), Expect = 6e-41
Identities = 130/146 (89%)
Strand = Plus / Minus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaa 76
||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||
Sbjct: 153 cctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaa 94
Query: 77 tctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctaga 136
|||||| | |||| |||||||||||||| | ||||||||||||||| || ||||||||
Sbjct: 93 tctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctaga 34
Query: 137 atgacttaaattgtgaaatggaggga 162
|||||||| ||||||||| |||||||
Sbjct: 33 atgacttacattgtgaaacggaggga 8
Score = 151 bits (76), Expect = 4e-36
Identities = 128/146 (87%)
Strand = Plus / Plus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaa 76
||||| ||||||||||||||||||| |||||| | |||||||||||||| | ||||
Sbjct: 10 cctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaa 69
Query: 77 tctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctaga 136
|||||| | | ||||||||||||||||||| || |||||||||||||| |||||||||||
Sbjct: 70 tctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctaga 129
Query: 137 atgacttaaattgtgaaatggaggga 162
|||||||| ||||||||| |||||||
Sbjct: 130 atgacttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 167 bits (84), Expect = 6e-41
Identities = 137/155 (88%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||| | |||||||||| |||||||||||| || ||||||||||||||| |||||
Sbjct: 92 atgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||||||| ||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtac 4
Score = 149 bits (75), Expect = 1e-35
Identities = 134/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||| | || ||| | |||| | |||||||| ||||||||||||||| ||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 167 bits (84), Expect = 6e-41
Identities = 137/155 (88%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtc 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | | |||||||||||||| || ||||||||||||||||||||
Sbjct: 64 aatgaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaat 117
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| ||| ||||| ||||||||||
Sbjct: 118 gctagaatgacttacattatgaaacggagggagta 152
Score = 157 bits (79), Expect = 6e-38
Identities = 135/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| |||||||| |||||||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| |||| ||||||||||||| || |||||||||||||||||||||
Sbjct: 92 atgaatctagacagat------gtctagattcattgacatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| || |||| | ||||||||| ||| |||||||| ||||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| ||||||||||||||||| ||||||||||| | ||||||||||| || ||||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| |||||| || ||||||||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| || |||||| ||||||||| || ||||| || ||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | |||||| | |||| |||||||| | ||||||||||| ||| ||||
Sbjct: 98 atgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaata 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| | |||| || ||||| ||||
Sbjct: 38 ctagaatgacttatactgtggaacggaggaagta 5
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| || ||| | ||||| |||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||||||||||||||||||||| | || |||||||||||| |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | ||||||||||||| | |||||||| ||||| |||
Sbjct: 64 aatgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||| ||||| ||||||||||
Sbjct: 124 agtagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| ||| ||||| ||||| ||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| ||||||||||||||||||||| | || |||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcc 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||||| | ||||||||||||| | || ||||| ||||| ||||
Sbjct: 64 aatgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 124 actagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 161 bits (81), Expect = 4e-39
Identities = 134/154 (87%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||| ||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatc------------tatgtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| |||||||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagta 146
Score = 123 bits (62), Expect = 9e-28
Identities = 121/143 (84%), Gaps = 12/143 (8%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 135 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactaga 76
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
| ||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 75 ca------------tagattcattaacatcaatatgaatgtggaaaatgctagaatgact 28
Query: 143 taaattgtgaaatggagggagta 165
|| ||| ||||| ||||| ||||
Sbjct: 27 tacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 159 bits (80), Expect = 2e-38
Identities = 136/155 (87%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||| | |||||||||| |||||||||||| || ||||||||||| ||| |||||
Sbjct: 65 atgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaatg 118
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||||||| ||||| |||||
Sbjct: 119 ctagaatgacttacattgtgaaacggaggaagtac 153
Score = 141 bits (71), Expect = 4e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||| | || ||| | |||| | |||||||| || |||||||||||| |||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 157 bits (79), Expect = 6e-38
Identities = 136/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||| |||||||||||||||||| ||||||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | |||||||||||| ||||||||||| || | ||||||||||||||||
Sbjct: 96 atgaatcta--tgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||| ||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 151 bits (76), Expect = 4e-36
Identities = 136/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||| || | ||||||||| ||||||||||||| || ||||||||||| |||||
Sbjct: 65 atgaatcaag--acatatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||| |||||||| ||| ||||| |||||||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagtac 157
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| ||||||| |||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||||| | || | ||||||||||||||||| || |||||||| |||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| ||||||||||||| ||||||| ||| |||||||| ||||||
Sbjct: 159 atactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | | || ||| |||| |||||||||| || ||||| ||||||| |||
Sbjct: 99 aatgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| ||| ||||| ||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| ||||| | ||||||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| || | ||||||||||||||||||| || |||||||| | || ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| ||||||| | | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | | | |||| ||||||||||||||| || ||||||||||| | | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 153 bits (77), Expect = 1e-36
Identities = 135/156 (86%), Gaps = 10/156 (6%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||| |||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||| |||||||||| ||||||||||||||||||||
Sbjct: 64 aatgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaat 113
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||||||| ||||||||| || ||||||||
Sbjct: 114 gctagaatgacttacattgtgaaacggggggagtac 149
Score = 151 bits (76), Expect = 4e-36
Identities = 125/143 (87%), Gaps = 10/143 (6%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 137 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat----- 83
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
|||||||||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 82 -----atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgact 28
Query: 143 taaattgtgaaatggagggagta 165
|| ||||||||| ||||| ||||
Sbjct: 27 tacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 151 bits (76), Expect = 4e-36
Identities = 135/154 (87%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| ||| |||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||||| |||||||| |||| | |||||||||||||||||||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
| |||||||||| ||| ||||| ||||||||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| | ||||| ||||||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||| ||||||| ||||| | ||||||||||||| ||||||||||||||||||||
Sbjct: 95 atggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaata 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 151 bits (76), Expect = 4e-36
Identities = 136/154 (88%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
||||||||| |||||||||||||||| || |||||||| ||||||| |||||||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgtta 57
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct: 58 atgaatctagatagatat--atgtctagattcattaacatcaatatgaatatgggaaatg 115
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||||||||
Sbjct: 116 ctaaaatgacttatattgtgaaacggagggagta 149
Score = 121 bits (61), Expect = 3e-27
Identities = 124/143 (86%), Gaps = 9/143 (6%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | |||||| | ||||||||||||||| || |||||||||||||
Sbjct: 89 atgaatctag--acatatatctatctagattcattaac------atcaatgtgggaaatg 38
Query: 132 ctagaatgacttaaattgtgaaa 154
|||||| |||||| |||||||||
Sbjct: 37 ctagaa-gacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/155 (87%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| || ||||||| | |||||||| |||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgct 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||| | |||||||||| || |||||||| | || |||||||||||| ||||
Sbjct: 64 aatgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| ||||||||| ||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 141 bits (71), Expect = 4e-33
Identities = 134/155 (86%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgct 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||| || | | |||||| || ||||||||||| | || |||||||| | | ||||
Sbjct: 99 aatgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
| |||||||||||| ||||||||| ||||||||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 135/155 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| ||||||| |||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||||| | || | ||||||||||||||||| || |||||||||| || ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||| ||||| |||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtac 4
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| ||||||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | | || ||| |||| |||||||||| || |||| ||||||| ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 147 bits (74), Expect = 6e-35
Identities = 133/155 (85%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||| ||||||||| ||||| ||||||| ||||||||||||||||||||
Sbjct: 64 aatgtatctagata------------tagatacattaacatcaatatgaatgtgggaaat 111
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| |||||| || ||||| ||||
Sbjct: 112 gctagaatgacttacattgtggaacggaggaagta 146
Score = 139 bits (70), Expect = 1e-32
Identities = 132/155 (85%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| || |||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 147 atacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||| ||||| || |||||| ||||||| ||||||||||||||| ||||
Sbjct: 87 aatgtatctatat------------ctagatacattaacatcaatatgaatgtggaaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| ||||||||| ||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| ||||| | ||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| || | ||| ||||||||||||||| || |||||||| | || ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 131 bits (66), Expect = 4e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| ||||||| | | |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| | | |||| ||||||||||||||| || ||||||||||| | | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 143 bits (72), Expect = 9e-34
Identities = 133/156 (85%), Gaps = 13/156 (8%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||| ||||||||||||||| |||||||| |||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata--------- 95
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 94 ----atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| ||| ||||| ||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtaca 3
Score = 101 bits (51), Expect = 3e-21
Identities = 127/155 (81%), Gaps = 13/155 (8%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| |||||||| || ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| | ||||||| |||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagat-------------tatgaatgtgggaaatg 111
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||||| ||| ||||| |||||
Sbjct: 112 ctagaatgacttacattgtaaaacggaggaagtac 146
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 141 bits (71), Expect = 4e-33
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| |||| || ||| || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| | | |||||| ||||||||||| | || ||||||||||||| ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||| ||||||||| ||| ||||| |||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagggagtac 159
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | || | ||| ||||||||||||||| || ||||| || |||| || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 141 bits (71), Expect = 4e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| |||||| | ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||||| ||| ||||||||||||| | ||||||| ||||||| |||||
Sbjct: 65 atgaatttagata------tatctctagattcattagcatcaatataaatgtggaaaatg 118
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| ||||||||| ||||||||| ||||||||||
Sbjct: 119 ctaaaatgacttatattgtgaaacggagggagta 152
Score = 137 bits (69), Expect = 6e-32
Identities = 136/157 (86%), Gaps = 6/157 (3%)
Strand = Plus / Minus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 154 catactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgc 95
Query: 70 taatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaa 129
|||||||||||| ||||||| |||| |||||||| | ||||| | |||||| ||||
Sbjct: 94 taatgaatctag--agatata----tctaaattcattagcatcaatgtaaatgtgagaaa 41
Query: 130 tgctagaatgacttaaattgtgaaatggagggagtac 166
||||| ||||||||| ||||||||| ||||| |||||
Sbjct: 40 tgctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | ||||| |||| ||||||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| |||| | ||||||||||||||||| || ||||||||||| | ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||| | | |||| ||||||||| ||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagggagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | | ||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | | |||||| ||||||||||||||| || || |||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|| || | |||| ||||||||| ||||||||||
Sbjct: 125 ttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||||| || ||| ||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| ||||||||||||||||| || |||||||| || | ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 131 bits (66), Expect = 4e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | || ||||||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||||||||||||||||||||| || ||||||||||||| |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| |||||| ||| ||||| ||||| ||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 137 bits (69), Expect = 6e-32
Identities = 133/154 (86%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | || | ||| ||||||||| |||||||||||||| ||||||
Sbjct: 65 atgaatctatgt-gaca--------tagtttcattaacatcaatatgaatgtgagaaatg 115
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| |||||||||
Sbjct: 116 ctagaatgacttacattgtgaaaccgagggagta 149
Score = 101 bits (51), Expect = 3e-21
Identities = 121/146 (82%), Gaps = 15/146 (10%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||
Sbjct: 138 tttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaaacta-- 81
Query: 83 tagatatatatgtc---tagattcattaacttcaatatgaatgtgggaaatgctagaatg 139
|||| ||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 80 ----------tgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatg 31
Query: 140 acttaaattgtgaaatggagggagta 165
||||| ||| ||||| ||||| ||||
Sbjct: 30 acttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 135/157 (85%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| |||||||| | || ||||||| |||||||||||| ||||||
Sbjct: 159 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||| | ||||||||||||||||| || ||||||||||| | |||
Sbjct: 99 aatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtaca 167
|||| || | |||| ||| ||||| ||||||||||||
Sbjct: 39 gctaaaaagtcttacattatgaaacggagggagtaca 3
Score = 131 bits (66), Expect = 4e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | |||||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | | |||||| ||||||||||||||| || ||||||||||||| ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 6e-32
Identities = 135/157 (85%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| |||||||| | || ||||||| |||||||||||| ||||||
Sbjct: 4 atacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||| | ||||||||||||||||| || ||||||||||| | |||
Sbjct: 64 aatgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagtaca 167
|||| || | |||| ||| ||||| ||||||||||||
Sbjct: 124 gctaaaaagtcttacattatgaaacggagggagtaca 160
Score = 131 bits (66), Expect = 4e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | |||||||||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | | |||||| ||||||||||||||| || ||||||||||||| ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 134/156 (85%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| | |||||| ||| ||||||||||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | || ||||| ||||| ||||||||| || |||||||| |||| |||
Sbjct: 99 aatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||| ||||| |||||||||||
Sbjct: 39 actagaaagtcttatattatgaaacggagggagtac 4
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 56 attcatattgatgttaatgaatctagatagatatatatgtctagattcattaacttcaat 115
|||||||| |||||||||||| ||||||| ||| |||||||||||||||||||| || ||
Sbjct: 49 attcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctat 108
Query: 116 atgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||| ||| ||| || | |||| ||||||||| ||||||||||
Sbjct: 109 atgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 135 bits (68), Expect = 2e-31
Identities = 134/156 (85%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| | |||||| ||| ||||||||||||| ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | || ||||| ||||| ||||||||| || |||||||| |||| |||
Sbjct: 64 aatgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||| ||||| |||||||||||
Sbjct: 124 actagaaagtcttatattatgaaacggagggagtac 159
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 56 attcatattgatgttaatgaatctagatagatatatatgtctagattcattaacttcaat 115
|||||||| |||||||||||| ||||||| ||| |||||||||||||||||||| || ||
Sbjct: 114 attcatatagatgttaatgaacctagatatatacatatgtctagattcattaacatctat 55
Query: 116 atgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||| ||| ||| || | |||| ||||||||| ||||||||||
Sbjct: 54 atgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 77/81 (95%)
Strand = Plus / Minus
Query: 87 tatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaa 146
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 147 ttgtgaaatggagggagtaca 167
|||||||| ||||| ||||||
Sbjct: 23 ttgtgaaacggaggtagtaca 3
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 130/156 (83%), Gaps = 18/156 (11%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||| ||||||||||||| |||||||||||||||||||||
Sbjct: 65 at------------------atgtatagattcattaacatcaatatgaatgtgggaaatg 106
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| ||||||||| ||||||||||||
Sbjct: 107 ctagaatgacttatattgtgaaacggagggagtaca 142
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 72 atgaatcta 80
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 127 bits (64), Expect = 5e-29
Identities = 132/157 (84%), Gaps = 12/157 (7%)
Strand = Plus / Plus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 2 acatacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
|||||||||||||| | |||||||||||| ||||||| ||| ||| ||
Sbjct: 62 ttaatgaatctaga------------tgtagattcattaatatcaatataaatatggaaa 109
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||| ||||||||| ||||||||||
Sbjct: 110 atgctagaatgacttacattgtgaaacggagggagta 146
Score = 125 bits (63), Expect = 2e-28
Identities = 122/144 (84%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatt 88
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 87 aatgaatctacat------------ctagattcattaacatcaatatgaatgtgagaaat 40
Query: 131 gctagaatgacttaaattgtgaaa 154
|||||||||||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaa 16
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 127 bits (64), Expect = 5e-29
Identities = 79/84 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 72 atgaatctagatagatatatatgt 95
||||||||||||||||||| ||||
Sbjct: 70 atgaatctagatagatataaatgt 47
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| |||||||| | ||| |||||||| ||||||||| |||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 155 tggagggagta 165
||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
|||| |||||||||||| ||| ||||||||| ||||| ||| ||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagtaca 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||| ||||| ||| ||||||||||||||||||| |||| ||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 127 bits (64), Expect = 5e-29
Identities = 131/154 (85%), Gaps = 7/154 (4%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||| || || ||| | ||| ||||||||| ||||||||||||||||||||
Sbjct: 91 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||||||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 129/155 (83%), Gaps = 7/155 (4%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||| ||||||||| || |||| |||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||| ||| || || || || ||||||||| ||||||| ||||||||||||
Sbjct: 64 aatgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaat 116
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 117 actagaatgacttacattgtgaaacggaggaagta 151
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 122/144 (84%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| |||||||||||| ||| |||||||| ||
Sbjct: 147 atactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatt 88
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct: 87 aatgaatctacat------------ctagattcattaacatcaatatgaatgtgagaaat 40
Query: 131 gctagaatgacttaaattgtgaaa 154
|||||||||||||| |||||||||
Sbjct: 39 gctagaatgacttacattgtgaaa 16
Score = 119 bits (60), Expect = 1e-26
Identities = 131/157 (83%), Gaps = 12/157 (7%)
Strand = Plus / Plus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 2 acatacttcttccgtttcacaatgtaagtcattctagcatttctcacattcatattgatg 61
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
|||||||||||||| | |||||||||||| ||||||| ||| ||| ||
Sbjct: 62 ttaatgaatctaga------------tgtagattcattaatatcaatataaatatggaaa 109
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||| ||||||||| ||||||||| ||||||||||
Sbjct: 110 atgctataatgacttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | |||||||||| ||| |||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | || ||| ||| ||||||||||||| || ||||| || || | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||||||||| |||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtac 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||||||| || || ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | ||| |||||||||||||||||||| || | |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| || | |||| ||||||||| ||||| ||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | ||| |||||||||||||||||| | || | |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| | || ||||||| ||| |||||| | |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgct 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | || ||| ||| ||||||||||||| | ||||| ||||||| |||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||| | |||| ||||||||| ||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 123 bits (62), Expect = 9e-28
Identities = 130/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| ||||||||||||||| ||||||||||| | | |||||
Sbjct: 65 atgaatctaga------------tctagattcattaacatcaatatgaatatagtaaatg 112
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| |||||| || ||||| |||||
Sbjct: 113 ctagaatgacttatattgtggaacggaggaagtac 147
Score = 121 bits (61), Expect = 3e-27
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| || |||||| ||||||||| |||||||| | | ||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 86 atgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|| ||||||||| ||| ||||| ||||||||||
Sbjct: 38 gtaaaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 123 bits (62), Expect = 9e-28
Identities = 129/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat---- 60
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||| || | |||||||| |||||| ||||||| ||| || ||||||
Sbjct: 61 ---------gatagatagatctatctagatttattaacatcaatataaatatgagaaatg 111
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 112 ctagaatgacttacattgtgaaacggagggagta 145
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/155 (83%), Gaps = 13/155 (8%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| || ||| ||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| ||||||||||||| || |||| ||| |||||||||||||||||||||
Sbjct: 85 ataaatctagatagatcta----tcta---tca------tcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||| ||||||||| ||||||||| ||||| |||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 123 bits (62), Expect = 9e-28
Identities = 74/78 (94%)
Strand = Plus / Minus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 149 gtgaaatggagggagtac 166
|||||| ||||| |||||
Sbjct: 21 gtgaaacggaggaagtac 4
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||||||| |||| || ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| ||| ||| | |||||||||||||||||| | | ||||||||||| ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||||||| |||||||||| | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | | ||||| | ||||||||||||| || ||||| || ||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||||||||| |||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtac 159
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 123 bits (62), Expect = 9e-28
Identities = 130/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| ||||||||||||||| ||||||||||| | | |||||
Sbjct: 86 atgaatctaga------------tctagattcattaacatcaatatgaatatagtaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| |||||| || ||||| |||||
Sbjct: 38 ctagaatgacttatattgtggaacggaggaagtac 4
Score = 121 bits (61), Expect = 3e-27
Identities = 129/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| || |||||| ||||||||| |||||||| | | ||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 65 atgaatctagat------------ctagattcattaacatcaatatgaatgtgggaaatg 112
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|| ||||||||| ||| ||||| ||||||||||
Sbjct: 113 gtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 121 bits (61), Expect = 3e-27
Identities = 128/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 13 acttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaa 72
||||||||| ||||| ||||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 73 tgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgc 132
| ||||||| ||||||||||||||| ||||||||||| ||| ||||||
Sbjct: 66 taaatctag-------------tctagattcattaacatcaatatgaatatggaaaatgc 112
Query: 133 tagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||||||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagta 145
Score = 121 bits (61), Expect = 3e-27
Identities = 125/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| ||||||| |||||| ||||||| |||||| ||||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagg 160
||||||||||||| ||| ||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 129/156 (82%), Gaps = 18/156 (11%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||| ||||||||||||| ||||||||||||||| |||||
Sbjct: 65 at------------------atgtatagattcattaacatcaatatgaatgtggaaaatg 106
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| ||||||||| ||||||||||||
Sbjct: 107 ctagaatgacttatattgtgaaacggagggagtaca 142
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 72 atgaatcta 80
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 125/148 (84%), Gaps = 15/148 (10%)
Strand = Plus / Minus
Query: 18 ctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaat 77
|||| ||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 137 ctccgtttcacaatgtaagtcattctagcattttc-------atattgatgttaatgaat 85
Query: 78 ctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 84 ctagata--------tgtttagattcattaacatcaatatgaatgtgggaaatgttagaa 33
Query: 138 tgacttaaattgtgaaatggagggagta 165
||||||| ||||||||| |||| |||||
Sbjct: 32 tgacttacattgtgaaacggagagagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 123/149 (82%), Gaps = 15/149 (10%)
Strand = Plus / Plus
Query: 18 ctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaat 77
|||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 11 ctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaat 70
Query: 78 ctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaa 137
| || | || ||||||||||||||| ||||||||| |||||||||||
Sbjct: 71 c--------taaacatatctagattcattaacatcaatatga-------aaatgctagaa 115
Query: 138 tgacttaaattgtgaaatggagggagtac 166
||||||| ||||||||| |||| ||||||
Sbjct: 116 tgacttacattgtgaaacggagagagtac 144
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 72 atgaatctagata 84
||||||| |||||
Sbjct: 74 atgaatcaagata 62
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 99 gattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatgga 158
||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| |||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 159 gggagta 165
|| ||||
Sbjct: 128 ggaagta 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 16 tttcacaatgtaagtcattttggcattttccacattcatattgatgt 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||||| |||||| | ||||||||| ||||||||| ||| |||||||
Sbjct: 59 tcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagtac 4
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 121 bits (61), Expect = 3e-27
Identities = 129/156 (82%), Gaps = 18/156 (11%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| ||||||||||||| |||||||| ||| |||||||||||||||
Sbjct: 141 atacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtt 82
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
||||||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 81 aatgaatctagat------------------tcattaacatcaatatgaatatgggaaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||||||| ||||||||| |||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagtac 4
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctagat 83
||||||||||||
Sbjct: 65 atgaatctagat 76
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 119 bits (60), Expect = 1e-26
Identities = 129/156 (82%), Gaps = 17/156 (10%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||| | ||||||||||| |||||||||||||| ||||||
Sbjct: 65 atgaatc-----------------attgattcattaacatcaatatgaatgtgagaaatg 107
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||| ||| ||||||||| ||||||||||||
Sbjct: 108 ctagaatgaattacattgtgaaacggagggagtaca 143
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 99 gattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatgga 158
||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 159 gggagta 165
|| ||||
Sbjct: 11 ggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 119 bits (60), Expect = 1e-26
Identities = 129/155 (83%), Gaps = 14/155 (9%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||||||| | |||||| ||| |||||||||||||||||||||
Sbjct: 84 ataaatctaga--------------caaattcatgaacatcaatatgaatgtgggaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||||| |||| ||||||||| |||||||||||
Sbjct: 38 ctagaatggcttacattgtgaaacggagggagtac 4
Score = 109 bits (55), Expect = 1e-23
Identities = 127/154 (82%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| |||| |||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| | ||||||||| || ||| |||||||||||||||||||||
Sbjct: 65 atgaattt--------------gtctagatttatgaacatcaatatgaatgtgggaaatg 110
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||| ||||
Sbjct: 111 ctagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 119 bits (60), Expect = 1e-26
Identities = 132/156 (84%)
Strand = Plus / Plus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||||||||| ||||| |||||||| | || ||||||| || |||||||||| |||||
Sbjct: 3 catacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgt 62
Query: 70 taatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaa 129
||||||||||||| | |||| | ||| ||||||||||||| || |||||||||||| ||
Sbjct: 63 taatgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaa 122
Query: 130 tgctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||||||||
Sbjct: 123 acctagaaagtcttacattatgaaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | || ||| || ||||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | | |||||||||||||||||||||| || |||||||||| | ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 119 bits (60), Expect = 1e-26
Identities = 129/151 (85%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 15 ttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatg 74
||||||| ||||| ||| ||||||||| ||||||| |||||||||||| ||||||||||
Sbjct: 8 ttcctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatg 67
Query: 75 aatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgcta 134
||||| | | |||||| || |||||||||||| || ||| ||||||||| ||| |||
Sbjct: 68 aatctgg--acatatatgtggctagattcattagtatctataagaatgtgggcaatccta 125
Query: 135 gaatgacttaaattgtgaaatggagggagta 165
|||||||||| ||||||||| ||||||||||
Sbjct: 126 gaatgacttatattgtgaaacggagggagta 156
Score = 107 bits (54), Expect = 5e-23
Identities = 126/149 (84%), Gaps = 2/149 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| ||| ||| |||||||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | ||||||||| |||||||||||| || ||||||||||||| ||||
Sbjct: 96 atgaatctag--ccacatatatgtccagattcattaacatctatatgaatgtgggcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagg 160
||||||||||||| ||| ||||| |||||
Sbjct: 38 ctagaatgacttatattatgaaacggagg 10
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 119 bits (60), Expect = 1e-26
Identities = 132/158 (83%), Gaps = 16/158 (10%)
Strand = Plus / Minus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||||||| ||||||||||||||||||| |||||||| ||| |||||||||||||
Sbjct: 145 acatacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatg 86
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
| |||| ||||| ||||||||||||| |||||||||||||| |||
Sbjct: 85 tcaatg----------gatat------ctagattcattaatatcaatatgaatgtgagaa 42
Query: 129 atgctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||||||||| ||||||||| |||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagtac 4
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 72 atgaatctagata 84
|||||||||||||
Sbjct: 65 atgaatctagata 77
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 131/155 (84%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| | || ||| ||| |||| | ||||| ||||||
Sbjct: 159 atactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtt 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||| ||| ||| |||||||||||||||||||| || | |||||| |||| |||
Sbjct: 99 aatgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||| | |||| ||||||||| ||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggaggaagta 5
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||||||| ||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | || ||| | | ||||||||||||| || ||||| | ||||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 155 tggagggagta 165
||||||||||
Sbjct: 15 cggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 119 aatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||||| ||| ||||| ||||| ||||
Sbjct: 88 aatgtgggaaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 153 aatggagggagtac 166
|| |||||||||||
Sbjct: 127 aacggagggagtac 140
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 79 atgaatctaga 69
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 115 bits (58), Expect = 2e-25
Identities = 88/97 (90%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
|||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||
Sbjct: 35 ttaatggatctagatagatat--atgtctagatccattaacatcaatatgaatgtgggaa 92
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||| ||| ||||| ||||| ||||
Sbjct: 93 atgctagaatgacttacattatgaaacggaggaagta 129
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 72 atgaatctaga 82
||| |||||||
Sbjct: 69 atggatctaga 59
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 72 atgaatctag 81
||||||||||
Sbjct: 65 atgaatctag 74
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Minus
Query: 96 ctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaat 155
|||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 156 ggagggagta 165
||||| ||||
Sbjct: 14 ggaggaagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||| | | ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||| | |||||||||||||||||||||| || ||||||||||||| |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||| ||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||| |||||| |||||||||| || |||||||| |||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
|||||| | |||| ||||||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagtaca 3
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||| | || ||||||| |||||||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||||| ||| ||| |||||||||||||||| | || ||||||||||||| ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||| | |||| ||||||||| ||||||||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/156 (81%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| | || || |||| |||||||||||| |||| |
Sbjct: 159 atactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgct 100
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | ||||| | |||||| |||| | || ||||||||||||| |||
Sbjct: 99 aatgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
|||| || | |||| ||| ||||| ||||| |||||
Sbjct: 39 gctataaagtcttacattatgaaacggaggaagtac 4
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 72 atgaatctag 81
||||||||||
Sbjct: 83 atgaatctag 74
Score = 91.7 bits (46), Expect = 3e-18
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 96 ctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaat 155
|||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 156 ggagggagta 165
||||| ||||
Sbjct: 134 ggaggaagta 143
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 153 aatggagggagtac 166
|| |||||||||||
Sbjct: 17 aacggagggagtac 4
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||||||| || ||||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| ||| ||||| ||||||||||||||| | || || |||||||||| ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||| ||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||| | || ||||||| ||||||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | ||||| | | ||||||||||||| || ||||||||| ||| ||||
Sbjct: 65 atgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 115 bits (58), Expect = 2e-25
Identities = 91/102 (89%)
Strand = Plus / Plus
Query: 38 cattttagcattttccacattcatattgatgttaatgaatctagatagatatatatgtct 97
|||| ||||||||||||||||||||| | |||||||||||||||| | ||||||| |||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 98 agattcattaacttcaatatgaatgtgggaaatgctagaatg 139
|||||||||||| | |||||||||||||||||| |||||||
Sbjct: 61 agattcattaacacctatatgaatgtgggaaatgttagaatg 102
Score = 115 bits (58), Expect = 2e-25
Identities = 85/94 (90%)
Strand = Plus / Minus
Query: 46 cattttccacattcatattgatgttaatgaatctagatagatatatatgtctagattcat 105
||||| |||||||||||| | |||||||||||||||||| ||||| ||||||||||||||
Sbjct: 94 catttcccacattcatataggtgttaatgaatctagatatatatagatgtctagattcat 35
Query: 106 taacttcaatatgaatgtgggaaatgctagaatg 139
|||| | |||||||||||| |||||||||||||
Sbjct: 34 taacacctatatgaatgtggaaaatgctagaatg 1
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 72 atgaatctagatagatat 89
||||||||||||||||||
Sbjct: 76 atgaatctagatagatat 59
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 155 tggagggagta 165
||||||||||
Sbjct: 126 cggagggagta 136
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 113 bits (57), Expect = 8e-25
Identities = 128/154 (83%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||| |||||||||||||||| ||||| ||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||| ||||||||||||| | |||||||||||||| |||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatatgaatgtgaaaaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||| ||||| ||||||||| ||||||||||
Sbjct: 38 ctagaataacttacattgtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 127/155 (81%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||| ||| ||||||||| |||||||||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgct 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| |||| |||||||| | ||||||| ||||| | ||||
Sbjct: 64 aatgaatctaga------------tctaaattcattagcatcaatataaatgtagaaaat 111
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||| ||| ||||||||| ||||||||||
Sbjct: 112 gctaaaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 72 atgaatcta 80
|||||||||
Sbjct: 70 atgaatcta 62
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
||||||||||||| ||||||||||||||| |||| ||| ||||||||| ||||||||| |
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 157 gagggagta 165
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||| | | ||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtc 63
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
|||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 153 aatggagggagta 165
|| ||||| ||||
Sbjct: 17 aacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 81 tcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
|||| ||||| ||||| ||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 111 bits (56), Expect = 3e-24
Identities = 131/155 (84%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||| | || ||||||| ||||||||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | ||||| |||||||||||||| ||||||||||| | || ||||
Sbjct: 96 atgaatctagacacgcatata--cctagattcattaacatcaatatgaatataggcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||| ||||| |||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggagggagtac 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | || ||||||| | | ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | |||| ||||||||||||||||| | |||||||||||| ||||
Sbjct: 65 atgaatctaggt--atatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||| ||||| ||||| ||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 72 atga 75
||||
Sbjct: 65 atga 68
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
|||||||| ||||||||||||||| |||||||| ||||||||| ||||||||| ||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 162 agtac 166
|||||
Sbjct: 8 agtac 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 106 taacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||||||||||||| |||||||| ||| | ||| ||||||||| ||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Query: 166 c 166
|
Sbjct: 129 c 129
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa
Japonica Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtt 63
Query: 71 aatgaatctagatag 85
||||||| |||||||
Sbjct: 64 aatgaatgtagatag 78
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
|||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 155 tggagggagta 165
||||| ||||
Sbjct: 15 cggaggaagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
|||| ||||| ||||| ||||||||||||||||| ||||| || |||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatg 80
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||| || |||| ||| ||||||||| ||| ||||| |||||||||||
Sbjct: 82 tcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagtac 137
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 121/143 (84%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||| ||||||||||||| ||||||||| |||||||| | ||||||| ||||||||||
Sbjct: 147 tttcataatgtaagtcattgtagcatttttcacattcacttggatgttagtgaatctaga 88
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
| ||||| || |||||||| |||| || |||| ||| || |||||||||||||||||
Sbjct: 87 catatatacatacttagattcactaacatctatatcaatatgagaaatgctagaatgact 28
Query: 143 taaattgtgaaatggagggagta 165
|| ||| ||||| ||||||||||
Sbjct: 27 tacattatgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| ||||||||||||| |||||||| || ||| |||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
| |||||||| || |||||||||||||||||| |||| || | |||||||| ||||
Sbjct: 64 agtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||||||| ||| ||||| |||||||||
Sbjct: 124 gctacaatgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 155 tggagggagta 165
||||||||||
Sbjct: 125 cggagggagta 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct: 136 atactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtt 77
Query: 71 aatgaatctagata 84
||||||||||||||
Sbjct: 76 aatgaatctagata 63
Score = 95.6 bits (48), Expect = 2e-19
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 106 taacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 109 bits (55), Expect = 1e-23
Identities = 130/154 (84%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | |||||||||| |||||||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||| || ||| | ||||||||||||||| || |||| |||||| ||||
Sbjct: 96 atgaatctagatatatgtatgtttctagattcattaacatctatat--atgtggacaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||| | |||| ||| ||||| ||||||||||
Sbjct: 38 gtagaaagtcttacattatgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||| ||||| ||||| |||||||| | || || |||| ||||||| |||| ||||
Sbjct: 2 acatactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatg 59
Query: 69 ttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaa 128
|||||||||||||| | ||| |||| |||||||||||||| || | || ||||||| |
Sbjct: 60 ttaatgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggaca 119
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||| || | |||| ||||||||| ||||| ||||
Sbjct: 120 atgctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 87 tatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaa 146
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 147 ttgtgaaatggagggagta 165
|||||||| ||||| ||||
Sbjct: 117 ttgtgaaacggaggaagta 135
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| || ||
Sbjct: 136 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatt 77
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 76 aatgaatctaga 65
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 51/54 (94%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 4 atactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 109 bits (55), Expect = 1e-23
Identities = 85/95 (89%)
Strand = Plus / Plus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| ||||||||||||||||||| |||||| || |||||||
Sbjct: 12 tagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctagatt 71
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| || ||||||||||||| ||||||||||
Sbjct: 72 cattaacatctatatgaatgtgggcaatgctagaa 106
Score = 101 bits (51), Expect = 3e-21
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| ||||||||||||||||| | |||||||| ||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctagatt 44
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| | ||||||||||||| ||||||||||
Sbjct: 43 cattaacatatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||| ||| | ||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| | | || |||||||||||||| |||||| || | ||| ||||||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||||||||| |||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtac 159
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/154 (81%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||||||| |||||| ||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||||||| | ||| |||||| ||||||||||||| || | ||||||| || |||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaata 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| || | |||| ||||||||| ||||| ||||
Sbjct: 38 ctataaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 109 bits (55), Expect = 1e-23
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||||| || |||||||||||| ||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 72 atgaatctagatagatatatatg 94
|||||||||||| |||||||||
Sbjct: 74 atgaatctagatgaatatatatg 52
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| | ||||||||| ||| ||||||||||| |||||| |||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 155 tggagggagtac 166
||||| |||||
Sbjct: 124 cggaggaagtac 135
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||| |||||||||||| ||| ||||| ||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||| ||||| ||||| ||||||||||||| || ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggag 159
|||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||| ||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 160 ggagta 165
| ||||
Sbjct: 10 gaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 18 ctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||| ||||| ||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 123 ctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt 72
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||| ||| |||||||||||||||||| ||| ||||| |||| |||||
Sbjct: 75 tcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| ||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 116 atacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatt 57
Query: 71 aatgaatctagata 84
||||||||||||||
Sbjct: 56 aatgaatctagata 43
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 90 atatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattg 149
|||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 150 tgaaatggagggagta 165
||||| ||||| ||||
Sbjct: 100 tgaaacggaggaagta 115
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||| ||||||||| ||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcat 48
|||| ||||| ||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| ||||||||| ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 72 atgaatctagatagatat 89
||||||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| ||||||| | ||| |||||||||||||||||| |||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 155 tggagggagta 165
||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||| ||||| ||||||||||||| ||||| ||| ||||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagtaca 3
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||| ||||| ||| ||||||||||||||| ||| |||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 107 bits (54), Expect = 5e-23
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 72 at 73
||
Sbjct: 65 at 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 91 tatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgt 150
||||| || ||| |||||| ||||||||||||||| |||| ||| ||||||||| |||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 151 gaaatggagggagta 165
|||| ||||| ||||
Sbjct: 19 gaaacggaggaagta 5
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 72 atgaatctagatag 85
||||||||||||||
Sbjct: 67 atgaatctagatag 54
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 155 tggagggagtac 166
||||| |||||
Sbjct: 117 cggaggaagtac 128
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattt 50
|||||||||| ||||||||||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 126 gaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||||||||| ||||||||| ||||| |||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagtac 4
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||| |||| || |||||| |||||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 72 atgaatctagatagatat 89
||||||||||||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| |||||||||||||| ||||| ||||||| |||| ||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 155 tggagggagta 165
||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 157 gagggagta 165
|||||||||
Sbjct: 13 gagggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 157 gagggagta 165
|||||||||
Sbjct: 122 gagggagta 130
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatcta 80
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 119 tttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatcta 62
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 72 at 73
||
Sbjct: 61 at 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 104 attaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
|||||| ||||||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaa 12
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa
Japonica Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 72 atgaatctagata 84
|||||||||||||
Sbjct: 65 atgaatctagata 77
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| ||||||||||| | | |||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 155 tggagggagtac 166
|||||||||||
Sbjct: 15 cggagggagtac 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||| ||||||||| || |||| | |||||||||||||||||
Sbjct: 139 atacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtt 80
Query: 71 aat 73
|||
Sbjct: 79 aat 77
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 72 atga 75
||||
Sbjct: 65 atga 68
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||| ||||||||||||||| ||||||||| |||||||||
Sbjct: 69 tcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 112 tttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
|||||||| ||||||||||||||| || ||||| ||||||||| ||| ||||| |||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 162 agta 165
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggta 64
Query: 72 atgaatct 79
||||||||
Sbjct: 65 atgaatct 72
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 98 agattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatgg 157
|||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 158 agggagta 165
||| ||||
Sbjct: 12 aggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 72 at 73
||
Sbjct: 77 at 76
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 103 bits (52), Expect = 8e-22
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
|||||||||||||||||||||||| || ||||||||||| | |||||||||||||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 146 attgtgaaatggagggagta 165
||| ||||||||||| ||||
Sbjct: 113 attatgaaatggaggaagta 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 73/81 (90%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||
Sbjct: 133 atacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtt 74
Query: 71 aatgaatctagatagatatat 91
|||||||||||| | ||||||
Sbjct: 73 aatgaatctagacatatatat 53
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||| | || ||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcatt 49
||||| ||||| ||||| ||||||||||||| |||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagcatt 42
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 155 tggagggagtac 166
|||||||||||
Sbjct: 122 cggagggagtac 133
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 2 acatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 72 atgaatctagata 84
|||||||||||||
Sbjct: 72 atgaatctagata 60
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 103 bits (52), Expect = 8e-22
Identities = 127/155 (81%), Gaps = 14/155 (9%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||||||||||||| ||||||||| |||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|| |||||| |||||||| |||||| ||| ||||||||||||||||
Sbjct: 65 at--------------atatatatctagatttattaacatcactatgaatgtgggaaata 110
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||| ||| ||||| ||||||||||
Sbjct: 111 ctagaatgacttacattatgaaacagagggagtac 145
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||| ||||||||||||| ||| |||| ||||||||||| |||||||||| ||||||||
Sbjct: 133 tttcataatgtaagtcattctagtatttcccacattcatagtgatgttaataaatctaga 74
Query: 83 tagatatat 91
|| ||||||
Sbjct: 73 tatatatat 65
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 155 tggagggagtac 166
|||||||||||
Sbjct: 15 cggagggagtac 4
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 135 acatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 72 atgaatctagata 84
|||||||||||||
Sbjct: 65 atgaatctagata 77
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 78 tcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtt 78
Query: 71 aatgaatctaga 82
||| ||||||||
Sbjct: 77 aataaatctaga 66
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 87 tatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaa 146
|||| ||||||||||| |||||| ||||||||||| |||||||||||| |||||||| |
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 147 ttgtgaaatggagggagta 165
|||||||| ||||| ||||
Sbjct: 118 ttgtgaaacggaggaagta 136
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 117 tgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||||||| ||||||| ||||| ||||||||| ||||| |||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagtac 4
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattca 60
|||||||||| ||||||||||||||| ||| ||| |||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 8 tacatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||
Sbjct: 134 tacatacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgat 75
Query: 68 gttaatga 75
||||||||
Sbjct: 74 gttaatga 67
Score = 93.7 bits (47), Expect = 8e-19
Identities = 59/63 (93%)
Strand = Plus / Minus
Query: 105 ttaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagt 164
||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 165 aca 167
|||
Sbjct: 5 aca 3
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
|||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 162 agta 165
||||
Sbjct: 127 agta 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 72 a 72
|
Sbjct: 65 a 65
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 155 tggagggagta 165
||||||||||
Sbjct: 113 cggagggagta 123
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| |||||||| | ||||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 72 atgaatctagata 84
|||||||||||||
Sbjct: 63 atgaatctagata 51
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttcca 54
||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagcattttcca 47
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 127 aaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||||| || ||||||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | | | |||||||||||||||||||| || | |||||| | | ||||
Sbjct: 65 atgaatctag--acacacatatgtctagattcattaacatctagatgaatataagcaatg 122
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| || | |||| ||| ||||| ||||||||||
Sbjct: 123 ctacaaagtcttacattatgaaacggagggagta 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| |||||||| | || ||||||| | |||||| | ||||||
Sbjct: 157 atactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtt 98
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | ||| | ||||||||||||||||| || ||||||||||||| |||
Sbjct: 97 aatgaatctagaca--tatgtgtgtctagattcattaacatctatatgaatgtgggcaat 40
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
||||||| |||||| ||| ||||| ||||| |||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagtac 4
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||| ||| |||||||||||||| | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 72 atgaatctagatagatata 90
||||||||| |||||||||
Sbjct: 65 atgaatctatatagatata 83
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
||||||||||||| ||||||| | ||||| |||||||||||| ||||| ||||||||| |
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 157 gagggagtac 166
||||||||||
Sbjct: 13 gagggagtac 4
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 99 gattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatgga 158
||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 159 gggagta 165
|||||||
Sbjct: 11 gggagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 124/154 (80%), Gaps = 20/154 (12%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 65 atgaatc--------------------gattcattagcatcaatatgaatgtgggaaatg 104
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||| ||||||||||
Sbjct: 105 ctagaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%), Gaps = 13/123 (10%)
Strand = Plus / Minus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatctagatagatatatat 93
|||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 94 -------------gtctagattcattaacttcaatatgaatgtgggaaatgctagaatga 140
||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 63 agatacattaaccatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 4
Query: 141 ctt 143
|||
Sbjct: 3 ctt 1
Score = 101 bits (51), Expect = 3e-21
Identities = 103/123 (83%), Gaps = 13/123 (10%)
Strand = Plus / Plus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatctagat---------- 83
|||||||| |||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatggttaatgta 60
Query: 84 ---agatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatga 140
|||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tctagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatga 120
Query: 141 ctt 143
|||
Sbjct: 121 ctt 123
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 13 acttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaa 72
||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||
Sbjct: 131 acttcctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataa 72
Query: 73 tgaatctagatagatatat 91
|||||||||| | ||||||
Sbjct: 71 tgaatctagacatatatat 53
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
|||||||||||||||||||||| | ||||||||||| || |||||||| |||||||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 146 attgtgaaatggagg 160
||||||||| |||||
Sbjct: 113 attgtgaaacggagg 127
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaa 16
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatat 63
||||||||||||||||||| |||||||| || |||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccgcattcatat 56
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 101 bits (51), Expect = 3e-21
Identities = 83/93 (89%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
|||||||| |||| ||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 2 tagcatttcccacgttcatattgatattaatgaatctagatagatata---atctagatt 58
Query: 103 cattaacttcaatatgaatgtgggaaatgctag 135
|||||| |||||||||| ||||||||||||||
Sbjct: 59 cattaatatcaatatgaacgtgggaaatgctag 91
Score = 93.7 bits (47), Expect = 8e-19
Identities = 82/93 (88%), Gaps = 3/93 (3%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
|||||||| |||| ||||||||||| ||||||||||||||| ||||| | ||||||||
Sbjct: 90 tagcatttcccacgttcatattgatattaatgaatctagat---tatatctatctagatt 34
Query: 103 cattaacttcaatatgaatgtgggaaatgctag 135
|||||| |||||||||| ||||||||||||||
Sbjct: 33 cattaatatcaatatgaacgtgggaaatgctag 1
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 87 atgaatctaga 77
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
||||||||||||||||| |||||||||||||| ||||| ||| ||||||||| |||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 153 aatggagggagtac 166
|| |||||||||||
Sbjct: 135 aacggagggagtac 148
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| ||| ||||||||| || ||||||||||||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 79 atgaatctaga 69
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 149 gtgaaatggagggagta 165
||||| ||||| ||||
Sbjct: 123 atgaaacggaggaagta 139
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
|||||||||||||||||| || | |||||||||||| ||||||||||||||||||| |||
Sbjct: 62 tatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacatt 121
Query: 149 gtgaaatggaggga 162
|||||| |||||||
Sbjct: 122 gtgaaacggaggga 135
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaa 76
||||| ||||||||||||||||||| |||||||| |||||||||||| |||| ||||||
Sbjct: 133 cctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaa 74
Query: 77 tctaga 82
||||||
Sbjct: 73 tctaga 68
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggga 162
|||||||||||||| ||||||||||||||||||| ||||||||| |||||||
Sbjct: 59 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| | | |||| | || ||||||| |||||||||||| |||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||| ||| ||| ||||||||| || |||||| |||||| ||||
Sbjct: 98 atgaatctagacatatatatgtgtataggttcattaacatctatatgattgtgggcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| | | ||||| ||||||||||
Sbjct: 38 ctagaaagtcttataatatgaaacggagggagta 5
Score = 95.6 bits (48), Expect = 2e-19
Identities = 108/128 (84%)
Strand = Plus / Plus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||| ||||| ||||| | | |||| | || ||||||| ||||| |||||| |||||
Sbjct: 3 catactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgt 62
Query: 70 taatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaa 129
||||||| ||| | | |||||||||||||||||||||| | || ||||||||||||| ||
Sbjct: 63 taatgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaa 122
Query: 130 tgctagaa 137
||||||||
Sbjct: 123 tgctagaa 130
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||| |||||||||| | || ||||||||||||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 72 atgaatctagatagatat 89
||||||||||||| ||||
Sbjct: 70 atgaatctagatatatat 53
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 88 atatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaat 147
|||||| ||||||||||||||| ||||||||||||||| ||||| |||| ||||||| ||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 148 tgtgaaatggagggagta 165
|||||| ||||||||||
Sbjct: 113 ggtgaaacggagggagta 130
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 56 attcatattgatgttaatgaatctagatagatatatatgtctagattcattaacttcaat 115
|||||||| ||||||||||||| |||| | |||||||||||||||||||||| || ||
Sbjct: 49 attcatatagatgttaatgaatttagacacgcatatatgtctagattcattaacatctat 108
Query: 116 atgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||| |||| ||| |||||| | |||| ||||||||| ||||||||||
Sbjct: 109 atgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/156 (82%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||| ||| ||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||| |||||| |||||||||| || |||||||| |||| | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagtaca 167
|||||| | |||| || |||||| ||||||||||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagtaca 3
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 72 atgaat 77
||||||
Sbjct: 54 atgaat 49
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggag 159
|||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 160 ggagta 165
| ||||
Sbjct: 109 gaagta 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 116 atgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcat 61
|||| ||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 99.6 bits (50), Expect = 1e-20
Identities = 131/157 (83%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| | | |||| | || ||||||| |||||||||||| ||||||
Sbjct: 4 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 63
Query: 71 aatgaatctagatagatatatatgtcta--gattcattaacttcaatatgaatgtgggaa 128
|||||||||| ||| |||| | ||| || ||||||||||| || ||||||||||||| |
Sbjct: 64 aatgaatctatatatatatgtgtgtgtatagattcattaacatctatatgaatgtgggca 123
Query: 129 atgctagaatgacttaaattgtgaaatggagggagta 165
||||||||| | |||| | | ||||| ||||||||||
Sbjct: 124 atgctagaaagtcttataatatgaaacggagggagta 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/97 (85%), Gaps = 2/97 (2%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagata--tatatgtctaga 100
||||||| |||||||||||| |||||||||||||||| | | | | ||||| | ||||
Sbjct: 129 tagcattgcccacattcatatagatgttaatgaatctatacacacacatatatatataga 70
Query: 101 ttcattaacttcaatatgaatgtgggaaatgctagaa 137
||||||||| || ||||||||||||| ||||||||||
Sbjct: 69 ttcattaacatctatatgaatgtgggcaatgctagaa 33
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 127/155 (81%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||||||| ||| ||||| || ||| ||||||||| |
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgct 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| |||| |||||||| | ||||||||||||| | ||||
Sbjct: 64 aatgaatctaga------------tctaaattcattagcatcaatatgaatgtagaaaat 111
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||||||||| ||| ||||||||| ||||||||||
Sbjct: 112 gctagaatgatttacattgtgaaacggagggagta 146
Score = 97.6 bits (49), Expect = 5e-20
Identities = 126/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||| ||||| |||||||||| ||||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||| ||||||||||||| | ||||||| ||| || ||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatataaatatgaaaaata 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||||||||| ||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtg 151
|||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 152 aaatggagggagta 165
||| ||||| ||||
Sbjct: 119 aaacggaggaagta 132
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||| | ||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 72 atgaatcta 80
|||||||||
Sbjct: 72 atgaatcta 64
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
|||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 99.6 bits (50), Expect = 1e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaactt 111
|||||||||||| |||||||||||||||||| | ||||||||||||||||||||| || |
Sbjct: 21 ccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttacat 80
Query: 112 caatatgaatgtgggaaatgctagaa 137
| ||||||||||| | |||||||||
Sbjct: 81 ctatatgaatgtgtgtgatgctagaa 106
Score = 97.6 bits (49), Expect = 5e-20
Identities = 76/85 (89%)
Strand = Plus / Minus
Query: 53 cacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacttc 112
||||||||||| ||||| |||||||||||| | |||||| ||||||||||||||||| ||
Sbjct: 93 cacattcatatagatgtaaatgaatctagacatatatatgtgtctagattcattaacatc 34
Query: 113 aatatgaatgtgggaaatgctagaa 137
||||||||||||| |||||||||
Sbjct: 33 tatatgaatgtgggtgatgctagaa 9
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 97.6 bits (49), Expect = 5e-20
Identities = 130/156 (83%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattc--atattgatgt 69
|||| ||||| |||||||||||||| | |||||||||| ||||| | |||| ||||
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 70 taatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaa 129
||||||||||| | | ||| |||||| ||||||||||||| || | ||||||||||| ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 130 tgctagaatgacttaaattgtgaaatggagggagta 165
|||||||| | |||| ||||||||| |||||||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacagagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 119/145 (82%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
|||||||||||||| | || ||||||| |||||||||| | |||||||||||||||| |
Sbjct: 16 tttcacaatgtaagactttctagcattacccacattcatttagatgttaatgaatctaaa 75
Query: 83 tagatatatatgtctagattcattaac--ttcaatatgaatgtgggaaatgctagaatga 140
| || ||| ||| ||||||||||||| | ||||| ||||| | ||||||| || |
Sbjct: 76 catatgtatgtgtttagattcattaacatatatatatgtatgtgagcaatgctaaaaagt 135
Query: 141 cttaaattgtgaaatggagggagta 165
|||| ||||||||| ||||||||||
Sbjct: 136 cttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 72 atgaatctagatagata 88
|| |||||| |||||||
Sbjct: 79 ataaatctatatagata 63
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
|||||| |||||| ||||||| | ||||| |||||||||||||||||| ||||||||| |
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 157 gagggagta 165
|||||||||
Sbjct: 131 gagggagta 139
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgat 60
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 72 atgaa 76
|||||
Sbjct: 65 atgaa 69
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 101 ttcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagg 160
||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 161 gagta 165
||||
Sbjct: 9 aagta 5
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| |||||||||||||||||||||||||||| || ||| ||||||||| |
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgct 63
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
|||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 141 catactccctccgtttcacaatataagtcattttagcattttccacattcatattgatg 83
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||
Sbjct: 85 tcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagta 139
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 129/156 (82%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
|||||||||| ||||| |||||||| | || |||| || |||||||||||| |||||
Sbjct: 4 atacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | | |||||||| |||||||||| | || ||||||||||||| |||
Sbjct: 64 aatgaatctagacacacatatatgtttagattcattgatatctatatgaatgtgggcaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagtac 166
|||| || | |||| ||| ||||| ||||||||||
Sbjct: 124 gctaaaaagtcttacattatgaaaccgagggagtac 159
Score = 87.7 bits (44), Expect = 5e-17
Identities = 110/132 (83%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||| |||||||| | |||||||||| |||||||||||| ||| | |||||||||| |
Sbjct: 147 tttcataatgtaagactttttagcattgcccacattcatatagatatcaatgaatctaaa 88
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
| |||| | ||||||||||||||||| | ||||||||||||| || ||||||| | ||
Sbjct: 87 catatatgtgtgtctagattcattaacatatatatgaatgtgggcaaggctagaaagtct 28
Query: 143 taaattgtgaaa 154
|| ||| |||||
Sbjct: 27 tacattatgaaa 16
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| ||||||||||||| ||| |||| ||||||||||||||||||
Sbjct: 4 atacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtt 63
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 88 atatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaat 147
|||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 148 tgtgaaatggagggagta 165
| ||||| ||||| ||||
Sbjct: 22 tatgaaacggaggaagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 78 aatatgaatgtgagaaatgctagaatgacttacattatgaaatggagggagta 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||| ||||||||||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 130 tactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| ||| |||| || ||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 72 atgaatctagatagatatatatgt 95
||||||||||||||||||||||||
Sbjct: 65 atgaatctagatagatatatatgt 88
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
|||||| | ||||||||||||| | ||||||| ||| || ||||| |||||||||||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 146 attgtgaaatggagggagtaca 167
||||||||| ||||| ||||||
Sbjct: 24 attgtgaaacggaggaagtaca 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 126 gaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||| ||||||||| ||| ||||| ||||||||||||
Sbjct: 89 gaaatgctacaatgacttacattatgaaacggagggagtaca 130
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattt 50
|||| ||||| ||||| ||||||||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 95.6 bits (48), Expect = 2e-19
Identities = 106/124 (85%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| |||||||||||||||||||| || || ||||||||||
Sbjct: 128 tagcattgcccacattcatatagatgttaatgaatctagatatatgtaggtgtctagatt 69
Query: 103 ca-ttaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
| ||||| || ||||||||||||| |||||||||| | |||| | | ||||| ||||||
Sbjct: 68 aatttaacatctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggaggg 9
Query: 162 agta 165
||||
Sbjct: 8 agta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Plus
Query: 43 tagcattttccacattcatattgatgttaa-tgaatctagatagatatatatgtctagat 101
||||||| |||||||||||| |||||||| | |||||||| | || |||| |||||||
Sbjct: 36 tagcattacccacattcatatagatgttaaattaatctagacacctacatatatctagat 95
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
|||||||| || ||||||||||||| |||||||||| | |||| | | ||||| ||||||
Sbjct: 96 tcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaacggaggg 155
Query: 162 agtaca 167
||||||
Sbjct: 156 agtaca 161
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
|||||||||| ||||| ||| ||||||||| |||||||||||||||||||| ||||| |
Sbjct: 4 atacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgct 63
Query: 71 aatgaatctagatag 85
|||||||||||||||
Sbjct: 64 aatgaatctagatag 78
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||
Sbjct: 84 tcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||| ||||| ||||| ||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||| | ||| ||||||||||| |||||||||||||||||| ||| |||||
Sbjct: 75 tctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatgaaa 16
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 93.7 bits (47), Expect = 8e-19
Identities = 97/116 (83%), Gaps = 12/116 (10%)
Strand = Plus / Plus
Query: 29 aatgtaagtcattttagcattttccacattcatattgatgttaatgaatctagatagata 88
||||||||||||| |||||||| |||||||||||||||| ||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaat----------- 49
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgactta 144
|||||||||||||||||| | |||||||||||||| |||||||||||||||||||
Sbjct: 50 -atatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 69.9 bits (35), Expect = 1e-11
Identities = 91/112 (81%), Gaps = 12/112 (10%)
Strand = Plus / Minus
Query: 33 taagtcattttagcattttccacattcatattgatgttaatgaatctagatagatatata 92
||||||||| |||||||| |||||||||||||||| ||||||||||||| |
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagaca-------- 53
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgactta 144
|| |||||||| | |||||||||||||| |||||||||||||||||||
Sbjct: 52 ----tatattcattagcatcaatatgaatgtgagaaatgctagaatgactta 5
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 93.7 bits (47), Expect = 8e-19
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| ||||||||||||| ||||||||||||||||| | ||| | || |||||||
Sbjct: 12 tagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagatt 71
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| || ||||||||||||| ||||||||||
Sbjct: 72 cattaacatctatatgaatgtgggcaatgctagaa 106
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| ||||||||||||||||| | | ||| |||||||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctagatt 44
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| | |||||||||||| ||||||||||
Sbjct: 43 cattaacatatatatgaatgtggacaatgctagaa 9
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
|||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
Score = 91.7 bits (46), Expect = 3e-18
Identities = 65/70 (92%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt 63
Query: 71 aatgaatcta 80
|||||||||
Sbjct: 64 -atgaatcta 72
Score = 83.8 bits (42), Expect = 7e-16
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtg 151
|||| ||||||||| ||| ||||||||||||||| |||||||||||| ||||| ||||||
Sbjct: 77 atgtttagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtg 19
Query: 152 aaatggagggagta 165
||| ||||||||||
Sbjct: 18 aaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||| ||| |||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 77 tcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| ||||||||| ||| || |||||||||||
Sbjct: 132 atacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtt 73
Query: 71 aatgaat 77
|||||||
Sbjct: 72 aatgaat 66
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggag 159
|||||||||| ||||||| || ||| |||||||||||||||||| ||||||||| ||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 160 ggagta 165
| ||||
Sbjct: 126 gaagta 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttc 52
|||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttc 45
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 127 aaatgctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagtaca 3
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 93.7 bits (47), Expect = 8e-19
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 110 ttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 60 ttcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattga 66
||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
||||||||||||||||||||| || ||||||||||||| |||||||||| |||||| |||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 149 gtgaaatggagggagtac 166
||||| ||||| |||||
Sbjct: 21 atgaaacggaggaagtac 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||||||||| || ||||||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 91.7 bits (46), Expect = 3e-18
Identities = 78/89 (87%), Gaps = 6/89 (6%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
|||||||| |||||||||||||||||| |||||||||||| || |||||||||||
Sbjct: 87 tagcatttcccacattcatattgatgtcaatgaatctagacag------atgtctagatt 34
Query: 103 cattaacttcaatatgaatgtgggaaatg 131
|||| || |||||||||||||||||||||
Sbjct: 33 cattgacatcaatatgaatgtgggaaatg 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 78/90 (86%), Gaps = 6/90 (6%)
Strand = Plus / Plus
Query: 46 cattttccacattcatattgatgttaatgaatctagatagatatatatgtctagattcat 105
||||| |||||||||||||||||| |||||||||||| | | |||||||||||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagaca------tctgtctagattcat 58
Query: 106 taacttcaatatgaatgtgggaaatgctag 135
| || |||||||||||||||||||||||||
Sbjct: 59 tgacatcaatatgaatgtgggaaatgctag 88
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| | |||||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 72 atgaat 77
||||||
Sbjct: 66 atgaat 61
Score = 83.8 bits (42), Expect = 7e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggag 159
||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 160 ggagta 165
| ||||
Sbjct: 121 gaagta 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||| ||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||| ||||| ||||||||||||||||||| |||||||| |||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 72 atgaatctagatagatat 89
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 82 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatataaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgtta 63
Query: 72 atgaat 77
||||||
Sbjct: 64 atgaat 69
Score = 71.9 bits (36), Expect = 3e-12
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggag 159
|||||||||| |||||||| ||||| |||||||||||||||||| ||||||||| ||||
Sbjct: 69 attcattaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggag 11
Query: 160 ggagtaca 167
| ||||||
Sbjct: 10 gaagtaca 3
Score = 58.0 bits (29), Expect = 4e-08
Identities = 42/45 (93%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcat 61
||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 107 cctccgtttcacaatgtaagtcattctagcatttt-cacattcat 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 127 aaatgctagaatgacttaaattgtgaaatggaggg 161
|||||||||||||||||| ||||||||| ||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 88 atatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaat 147
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 148 tgtgaaatggagggagta 165
||||||| ||||| ||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||||||||||||| |||||||| ||||||||||||| | |
Sbjct: 131 atacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtact 72
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 71 aatgaatctaga 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||| ||||||||||||| ||||| ||||||||| ||||| ||||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagtaca 3
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||||||||| ||||||||||||||| ||| |||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Minus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggag 159
|||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 160 ggagtac 166
| |||||
Sbjct: 10 gaagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||||| ||||| ||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 132 catactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||| ||| |||||||||||||||||| ||||||||| ||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagta 130
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||| |||| ||| | || ||||||| |||||||||| | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaac 109
||||||||| | | ||||||||||||||||||||||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaac 102
Score = 83.8 bits (42), Expect = 7e-16
Identities = 87/102 (85%)
Strand = Plus / Minus
Query: 65 gatgttaatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtg 124
|||||||||||||||||| | |||||| ||| ||||||||||||| || | |||||||||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 125 ggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
|| |||||||||| | ||| ||| ||||| ||||| |||||
Sbjct: 45 ggtaatgctagaaagtcttgcattatgaaacggaggaagtac 4
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||||||||||||||||| ||||||||||||||| || ||| |||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 72 atgaatctagata 84
|||||||||||||
Sbjct: 46 atgaatctagata 34
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||| ||||||| ||| || |||||||| ||||| ||| |||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 155 tggagggagtac 166
||||||||||||
Sbjct: 96 tggagggagtac 107
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcatt 41
||||||||||| |||||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| |||||||||||||| | || ||||||| ||||||||||| | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtt 63
Query: 71 aatgaatctagatagatatat 91
|||||||||||| | ||||||
Sbjct: 64 aatgaatctagacatatatat 84
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
|||||||||||||||||||||||| || | |||||||||| |||||||||| | ||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 146 attgtgaaatggagggagta 165
||||||||| ||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 101 ttcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagg 160
||||||||| ||| ||| |||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 161 gagta 165
|||||
Sbjct: 117 gagta 121
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagtac 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||||||| ||||||||| |||||||| ||||||| ||| |||||||
Sbjct: 122 atactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtt 63
Query: 71 aatgaa 76
||||||
Sbjct: 62 aatgaa 57
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||| ||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgcta 76
Query: 72 atgaatct 79
||||||||
Sbjct: 75 atgaatct 68
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 98 agattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatgg 157
|||||||||| | |||||||||||||| ||||||||||||||||||| ||||||||| ||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 158 agggagta 165
||| ||||
Sbjct: 128 aggaagta 135
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
|||||| | |||||||||||||| ||||||||||||||||||| || |||||| |||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 162 agta 165
||||
Sbjct: 8 agta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 75
|||||| |||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 16 tttcacgatgtaagtcattctagcatttctcacattcatattgatgctaatga 68
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 94 gtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaa 153
|||||||||||||| | ||||||||||| |||||||| ||||||||||||| ||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 154 atggagggagta 165
| ||||||||||
Sbjct: 125 acggagggagta 136
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| ||| |||| ||| ||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 76 atgaatctaga 66
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
|||||||||| ||||||||||||||| ||| ||| |||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg 61
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||| || ||||| ||||||| ||||| ||||||||| ||||| ||||
Sbjct: 59 tcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 10 catacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||| ||||| ||||||||||||||||||| || |||||| ||| ||||||||||||
Sbjct: 133 catactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgc 74
Query: 70 taatgaatctag 81
||||||||||||
Sbjct: 73 taatgaatctag 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 96 ctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaat 155
|||||||||||| | |||||||||| ||| ||||| |||||||||||| |||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 156 ggagggagta 165
||||||||||
Sbjct: 122 ggagggagta 131
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggga 162
|||||||| || |||||| |||||||||||| ||||||||| |||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| |||||||| ||||||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 72 atgaatct 79
||||||||
Sbjct: 75 atgaatct 68
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 98 agattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatgg 157
||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 158 agggagta 165
||| ||||
Sbjct: 128 aggaagta 135
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
||||||| ||||| |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 68 tcattaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggaggg 9
Query: 162 agta 165
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
|||||||||||| ||||||| || || ||||||||||||||||||| ||||||||| |
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 157 gaggga 162
||||||
Sbjct: 13 gaggga 8
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaa 76
||||| ||||||||| ||||||||| |||||||| || || |||||||| ||||||||
Sbjct: 10 cctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatgaa 69
Query: 77 tcta 80
||||
Sbjct: 70 tcta 73
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 110 ttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 59 ttcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||
Sbjct: 58 tcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattga 66
|||||||||| ||||||||| ||||||||| |||||||| |||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 52/57 (91%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||| ||||| ||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 85.7 bits (43), Expect = 2e-16
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattt-tagcattttccacattcatattgatgtt 70
|||| ||||| |||||||||||||||| | || ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 71 aatgaatctagatagatat 89
|||||||||||||||||||
Sbjct: 65 aatgaatctagatagatat 83
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctaga-atgacttaaattgtgaa 153
||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 154 atggagggagta 165
| ||||||||||
Sbjct: 16 acggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 83 tcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||| ||| ||||||||| ||||||||||||||||||| || ||| | ||| |||||
Sbjct: 4 atacttcttccgtttcacaatataagtcattttagcatttttcatatttacattaatgtt 63
Query: 71 aatgaatctagatagatat 89
|||||||||||| ||||||
Sbjct: 64 aatgaatctagacagatat 82
Score = 61.9 bits (31), Expect = 3e-09
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatat 63
||||| ||||||||| |||||||||||| |||||| |||||||||||
Sbjct: 125 cctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 54.0 bits (27), Expect = 7e-07
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 88 atatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaat 147
|||| ||||||||||||||||| | ||| | ||| || |||||||| ||||||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 148 tgtgaaa 154
|||||||
Sbjct: 22 tgtgaaa 16
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
||||||||||| ||||| || ||||||||| ||||||||| ||||||
Sbjct: 79 atatgaatgtgaaaaatgttaaaatgacttatattgtgaaacggaggg 126
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
|||||||||| ||||| |||||||| | || |||| || ||||||| |||| ||| |
Sbjct: 4 atacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatact 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | |||| | || |||||||||||| | | ||||||||||||| |||
Sbjct: 64 aatgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaat 123
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
||||||| | |||| ||| ||||| ||||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggagggagta 158
Score = 77.8 bits (39), Expect = 5e-14
Identities = 117/143 (81%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | || ||||||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| | | |||||||||||||||||||| || |||| |||||||| || |
Sbjct: 98 atgaatctaggcacacatatatgtctagattcattagtatctatataaatgtgggcaacg 39
Query: 132 ctagaatgacttaaattgtgaaa 154
|||||| | |||| ||| |||||
Sbjct: 38 ctagaaagtcttacattatgaaa 16
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
|||| ||||| ||||||||||||||||||| |||||||| |||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 121 tgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||| ||| ||||| ||| ||||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtaca 121
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||||||||| ||||||||| ||||||||| |||||||| |||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 59 tcaatatgaatatgggaaatgctagaatgacttatattgtgaaa 16
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||||||| ||||||||| |||||||| ||| |||||||||||||
Sbjct: 16 tttcacaatataagtcattctagcatttcccatattcatattgatg 61
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 82 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||||||||||||| |||||||| ||||||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 72 atgaatctagatagatat 89
|| ||| |||||| ||||
Sbjct: 65 ataaatttagataaatat 82
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||||||||| ||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 137 atacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| ||||||||||||||||| | |||| |||| |||||||
Sbjct: 103 tagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctagatt 44
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| | |||||||| |||| ||||||||||
Sbjct: 43 cattaacatatatatgaatatgggcaatgctagaa 9
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| ||| |||||||| |||||||||||||||| | | ||||||| |||||||
Sbjct: 12 tagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctagatt 71
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
||||||| || ||||||||||||| ||||||||||
Sbjct: 72 cattaacatctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||| |||||||||| | ||||| ||| | |||||||| | |||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||| |||| | || || ||| ||||||||||||| || ||||| ||||| | ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 94/112 (83%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||||||| ||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgt 123
||||||||| | | || ||||||||| |||||||||| || | ||||||||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacatctaaatgaatgt 47
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 59 tcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtg 151
|||||||||||||||| | ||||||| ||| |||||||||||| ||||||||| ||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 152 aaatggagggagta 165
|| ||||||||||
Sbjct: 18 gaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| || |||||||||||||||| |||||||| ||| ||| ||||||||| |
Sbjct: 4 atactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgct 63
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 64 aatgaatctaga 75
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||
Sbjct: 78 tcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||||||||| |||||||| | || ||||||| ||||||||||||| ||||||
Sbjct: 4 atactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtt 63
Query: 71 aatgaatctagata 84
||| ||||||||||
Sbjct: 64 aataaatctagata 77
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
|||||||| |||||| || |||||||||||| |||||||||| | |||| ||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 155 tggagggagta 165
|||||||||||
Sbjct: 15 tggagggagta 5
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 127/155 (81%), Gaps = 4/155 (2%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| |||||||||||||| | || |||| || |||||||||| | ||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtt 63
Query: 71 aatgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaat 130
|||||||||||| | || ||| | |||||||||||| || |||| ||||||| | |
Sbjct: 64 aatgaatctagacatatgtattt----agattcattaacatctttatgtatgtgggtagt 119
Query: 131 gctagaatgacttaaattgtgaaatggagggagta 165
|||| || | |||| ||||||||| ||||||||||
Sbjct: 120 gctaaaaagtcttatattgtgaaacggagggagta 154
Score = 81.8 bits (41), Expect = 3e-15
Identities = 126/154 (81%), Gaps = 4/154 (2%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| |||| | |||||||| | |||||| |||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||| ||| |||| |||||||||||||||| || | ||||||||||| || |
Sbjct: 94 atgaatctaaatacatat----gtctagattcattaacatctaaatgaatgtgggcaacg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
||| || | |||| ||||||||| ||||| ||||
Sbjct: 38 ctacaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 87/101 (86%), Gaps = 6/101 (5%)
Strand = Plus / Plus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagata----gatat--atatgtc 96
||||||| |||||||||||| |||||||||||||||||||| ||||| || ||||
Sbjct: 8 tagcattgcccacattcatatggatgttaatgaatctagatatatggatattaatgtgtc 67
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaa 137
||||||||||||| || ||||||||||||| |||| |||||
Sbjct: 68 tagattcattaacatccatatgaatgtgggcaatgttagaa 108
Score = 71.9 bits (36), Expect = 3e-12
Identities = 79/92 (85%), Gaps = 6/92 (6%)
Strand = Plus / Minus
Query: 52 ccacattcatattgatgttaatgaatctagatagat----at--atatgtctagattcat 105
|||||||||||| |||||||||||||||||| | || || |||| |||||||||||
Sbjct: 96 ccacattcatatggatgttaatgaatctagacacattaatatccatatatctagattcat 37
Query: 106 taacttcaatatgaatgtgggaaatgctagaa 137
|||| || ||||||||||||| ||||||||||
Sbjct: 36 taacatccatatgaatgtgggcaatgctagaa 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 71 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
|||||||||||| ||||||||||| || ||||||||||||||||||| ||| ||||| |
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 157 gagggagta 165
|||||||||
Sbjct: 118 gagggagta 126
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||||||||| ||||||||| ||||||||| |||||||||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| |||||||| || |||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 72 atgaatcta 80
|||||||||
Sbjct: 66 atgaatcta 58
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||| ||||||| |||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||||||||| ||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||| ||| ||||||||| ||||||||| ||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcatttta 44
|||| ||||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttta 37
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 136 aatgacttaaattgtgaaatggagggagtac 166
||||||||| ||||||||| |||||||||||
Sbjct: 34 aatgacttacattgtgaaacggagggagtac 4
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 79.8 bits (40), Expect = 1e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 71 tcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||| ||||| ||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| ||||||||| ||| ||||||| ||||||||||||| ||||||
Sbjct: 138 atactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtt 79
Query: 71 aatgaatctaga 82
||| ||||||||
Sbjct: 78 aataaatctaga 67
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 91 tatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgt 150
|||||||||||| |||||| || |||||||||||| ||||||||||| ||||| ||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 151 gaaatggagggagta 165
|||| ||||||||||
Sbjct: 123 gaaacggagggagta 137
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 117 tgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||| ||||||||||| ||||| ||| ||||| ||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||| || ||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattga 66
|||| ||||| ||||||||||||||||||| |||||||| |||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 128 aatgctagaatgacttaaattgtgaaa 154
||||||||||||||||| |||||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaa 93
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcata 62
||||||||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 4 atacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
||||||||||||||||||||| ||||| ||| | ||||| ||||||||||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 149 gtgaaatggagggagta 165
|||||| ||||| ||||
Sbjct: 123 gtgaaacggaggaagta 139
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 115 tatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||| |||| ||||||||||||| ||||||||| ||||| ||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||| ||||||||| ||| |||| | ||| ||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 79 atgaatctaga 69
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 90 atatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattg 149
|||||| ||||||||||||| || ||||| ||||||| |||||||||| | |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 150 tgaaatggagggagta 165
||||| ||||||||||
Sbjct: 121 tgaaacggagggagta 136
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| |||| | || ||||||| |||||| ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 72 atgaatcta 80
|||||||||
Sbjct: 76 atgaatcta 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacatt 58
||||||||||| ||||||||| |||| | |||| ||||| ||||||||
Sbjct: 4 atacttcctccgtttcacaatataagactttttggcattgtccacatt 51
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 79.8 bits (40), Expect = 1e-14
Identities = 77/89 (86%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 89 tagcattgcccacattcatatatatgttaatgaatctagata----tatatgtctagatt 34
Query: 103 cattaacttcaatatgaatgtgggaaatg 131
||||||| | ||||||||||||| ||||
Sbjct: 33 cattaacatatatatgaatgtgggcaatg 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 72/84 (85%), Gaps = 4/84 (4%)
Strand = Plus / Plus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaactt 111
|||||||||||| ||||||||||||||||| | |||||| |||||||||||||| |
Sbjct: 11 ccacattcatatatatgttaatgaatctagacatatatat----ctagattcattaacat 66
Query: 112 caatatgaatgtgggaaatgctag 135
||||||||||||| ||||||||
Sbjct: 67 atatatgaatgtgggcaatgctag 90
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 90 atatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattg 149
|||||| ||||||||||||| || ||||| ||||||| |||||||||| | |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 150 tgaaatggagggagta 165
||||| ||||||||||
Sbjct: 20 tgaaacggagggagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||||||| |||| | || ||||||| |||||| ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 72 atgaatcta 80
|||||||||
Sbjct: 65 atgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacatt 58
||||||||||| ||||||||| |||| | |||| ||||| ||||||||
Sbjct: 137 atacttcctccgtttcacaatataagactttttggcattgtccacatt 90
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 106 taacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||| ||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattt 50
||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 127 atacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 126 gaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagta 126
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
|||||||||||||||||||||||| | ||||||||||||| |||||||||| | ||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 146 attgtgaaatggagggagta 165
| | ||||| ||||||||||
Sbjct: 113 aatttgaaacggagggagta 132
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatat 91
||||||| |||||||||||| ||||||||||||||||| | ||||||
Sbjct: 101 tagcattacccacattcatatatatgttaatgaatctagacatatatat 53
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 79.8 bits (40), Expect = 1e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 90 atatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattg 149
||||||||||||| |||||| || ||||||||||||| |||||||||| | |||| ||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 150 tgaaatggagggagta 165
||||| ||||| ||||
Sbjct: 119 tgaaacggaggaagta 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||||||| |||||||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 72 atgaatctaga 82
|| ||||||||
Sbjct: 74 ataaatctaga 64
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 26 cacaatgtaagtcattttagcattttccacattcatattgatgttaatgaat 77
||||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 100 cacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 116 atgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||| ||||||||||||||| ||| ||||||||| |||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagtac 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 100 attcattaacttcaatatgaatgtgggaaatgctagaatgactt 143
|||||||| | |||||||||||||||||||||||| ||||||||
Sbjct: 49 attcattagcatcaatatgaatgtgggaaatgctaaaatgactt 92
Score = 52.0 bits (26), Expect = 3e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcat 61
|||| ||||| ||||||||||||| ||||| |||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||| |||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 77.8 bits (39), Expect = 5e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 119 aatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 103 aatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 149
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 9 acatacttcctccatttcacaatgtaagtcattttagcattttccacatt 58
||||||| ||||| ||||||||||||||||||| |||||||| |||||||
Sbjct: 152 acatactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
||||| ||||| ||||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
|||| |||||||||||||||||||||||||| |||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaa 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatat 63
||||||||||||||||||| |||||||| ||||||| ||||
Sbjct: 95 tttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 77.8 bits (39), Expect = 5e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 120 atgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagggagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacat 57
|||| ||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 128 aatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||| ||| ||||||||| ||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagta 95
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcatt 49
||||| ||||| ||||||||||||| ||||| |||||||
Sbjct: 96 atactccctccgtttcacaatgtaaatcattctagcatt 58
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||| | || ||||||| ||||||||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 72 atgaatctaga 82
|| ||||||||
Sbjct: 80 ataaatctaga 70
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
|||||||||| |||||| || |||||||||||| |||||||||| | |||| |||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 153 aatggagggagta 165
|| ||||||||||
Sbjct: 128 aacggagggagta 140
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
||||| ||||| |||||||||||||| | |||||||||| |||| |||||||| |||||
Sbjct: 4 atactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt 62
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| ||||| ||||||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||| ||||| ||||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct: 4 atactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||| |||||||||||||||| |||||| |||||| |||||||||
Sbjct: 132 tttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcata 62
|||||||||| ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 115 tatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 126 gaaatgctagaatgacttaaattgtgaaatggagggagtac 166
||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagtac 4
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 23 tttcacaatgtaagtcattttagcattt 50
||||||||||||||||||| ||||||||
Sbjct: 16 tttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 43 tagcattttccacattcatattgatgttaatgaatctagatagatatatatgtctagatt 102
||||||| |||||||||||| |||||||||||||| | | |||||||||||||||||
Sbjct: 127 tagcattgcccacattcatatatatgttaatgaatcttggcacatatatatgtctagatt 68
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaa 137
|||||| | ||||||||||||| ||||| ||||
Sbjct: 67 tattaacatatatatgaatgtgggcaatgccagaa 33
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaactt 111
|||||||||||| |||||||| |||||||| | |||||| || | |||||||||||| |
Sbjct: 45 ccacattcatatatatgttaataaatctagacatatatatgtgccaagattcattaacat 104
Query: 112 caatatgaatgtgggaaatgctagaa 137
||||||||||||| ||||||||||
Sbjct: 105 atatatgaatgtgggcaatgctagaa 130
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| ||||||||||||||||||| |||||||| |||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 72 atg 74
|||
Sbjct: 65 atg 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 103 cattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggga 162
||||||| | ||||| |||||| ||||||||||||||||||| ||||||||| ||||| |
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 163 gta 165
|||
Sbjct: 7 gta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 128 aatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||| |||||| || ||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 97 tagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatg 156
||||||||||||| || ||||||||||||| |||||||||| | |||| ||| ||||| |
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 157 gagggagtaca 167
|||||||||||
Sbjct: 132 gagggagtaca 142
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | || ||||||| |||||||||||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 72 atgaatcta 80
|||||||||
Sbjct: 80 atgaatcta 72
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||||||| |||||||||||||||||| || ||| |||||||||||
Sbjct: 123 atacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtt 64
Query: 71 aa 72
||
Sbjct: 63 aa 62
Score = 73.8 bits (37), Expect = 7e-13
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| |||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 72 a 72
|
Sbjct: 65 a 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 105 ttaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagt 164
||||| ||||||| ||| || ||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 165 aca 167
|||
Sbjct: 5 aca 3
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||| ||||| ||||||||||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattga 66
|||| ||||||||||| ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| |||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||| |||| ||| ||||||||| ||||||||| ||||||||||
Sbjct: 59 tcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 57 ttcatattgatgttaatgaatctagatagatatatatgtctagattcattaacttcaata 116
||||||| ||||| |||||||||| | | ||||||||||||||||||||| || | |||
Sbjct: 113 ttcatatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatata 54
Query: 117 tgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtac 166
|||||||||| |||| ||||| | |||| | | ||||| ||||| |||||
Sbjct: 53 tgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagtac 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 93/114 (81%)
Strand = Plus / Plus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaactt 111
|||||||||||| |||| |||||||||||| | |||||| ||| |||||||||| || |
Sbjct: 45 ccacattcatatatatgtcaatgaatctagacatatatatgtgtttagattcattgacat 104
Query: 112 caatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
| ||||||| ||| ||| |||||| | |||| | | ||||| ||||||||||
Sbjct: 105 ctatatgaagatggacaattctagaaagtcttataatatgaaacggagggagta 158
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccaca 56
||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 109 atacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 116 atgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||| ||||||||||| ||||||||| ||||||||| ||||||||||||
Sbjct: 54 atgaatgcgggaaatgctaaaatgacttacattgtgaaacggagggagtaca 3
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcat 61
|||| ||||| |||||||||||||||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 58.0 bits (29), Expect = 4e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 121 tgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||| |||||||||||||||||| ||||||||| ||||| ||||
Sbjct: 64 tgtggaaaatgctagaatgacttacattgtgaaacggaggaagta 108
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 119 aatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||| |||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 70 aatgtggaaaatgctagaatgacttacattgtgaaacggagggagtaca 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacatt 58
|||| ||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 118 gaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||| ||| ||||||||||||||||| ||||||||| ||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattc 59
|||| ||||| |||||||||| |||||||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
|||||| |||||||||| || ||||||||||||| |||||||||| | |||| ||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 153 aatggagggagta 165
|| ||||||||||
Sbjct: 17 aacggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| |||||||| | || ||||||| |||||||||||| ||||||
Sbjct: 4 atactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtt 63
Query: 71 aatgaatctaga 82
||||||| ||||
Sbjct: 64 aatgaatttaga 75
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| |||||||||| | |||| ||| ||||| ||||||||||||
Sbjct: 91 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtaca 144
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||| ||||| ||||| |||||||| | || ||||||| |||||||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 85
>RF00906;MIR1122;AAAA02021983.1/2035-1916 39946:Oryza sativa Indica
Group
Length = 120
Score = 73.8 bits (37), Expect = 7e-13
Identities = 91/109 (83%)
Strand = Plus / Plus
Query: 29 aatgtaagtcattttagcattttccacattcatattgatgttaatgaatctagatagata 88
|||||||| | || ||||||| |||||||||||| ||| |||||||||||| | | |
Sbjct: 1 aatgtaagactttctagcattgcccacattcatatctatgctaatgaatctaggcacaca 60
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaa 137
|||||||||||||||||| | || ||||||||||||| |||| |||||
Sbjct: 61 tatatgtctagattcatttgcatctatatgaatgtgggcaatgttagaa 109
Score = 67.9 bits (34), Expect = 4e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatatgtctagattcattaactt 111
|||||||||||| |||| |||||||||||| | |||| | || |||||||||||| | |
Sbjct: 97 ccacattcatatagatgcaaatgaatctagacatatatgtgtgcctagattcattagcat 38
Query: 112 caatatgaatgtgggaaatgctagaa 137
||||||||||||| ||||||||||
Sbjct: 37 agatatgaatgtgggcaatgctagaa 12
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
||||| |||||||||||||||||| || |||||||||||| |||||||||| | ||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 146 attgtgaaatggagggagtac 166
||| ||||| ||||||||||
Sbjct: 113 attatgaaacagagggagtac 133
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||| |||||||| | || ||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaagactttctagcattgtccacattcatatagatgttaatgaatctaga 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 8 tacatacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgat 67
|||||||||||||| ||||| |||||||| | || ||||||| ||||||||||||| |||
Sbjct: 1 tacatacttcctccttttcataatgtaagactttctagcattgtccacattcatatagat 60
Query: 68 gt 69
||
Sbjct: 61 gt 62
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 99 gattcattaacttcaatatgaatgtgggaaatgctagaatgactt 143
||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 45 gattcattagcatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 99 gattcattaacttcaatatgaatgtgggaaatgctagaatga 140
||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 46 gattcattagcatcaatatgaatgtgggaaatgctagaatga 87
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 34 aagtcattttagcattttccacattcatattgatgttaatgaatc 78
|||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc 45
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 37 tcattttagcattttccacattcatattgatgttaatgaatc 78
||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc 46
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 73.8 bits (37), Expect = 7e-13
Identities = 124/155 (80%), Gaps = 11/155 (7%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| | || ||||||| |||||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||| | |||||||||||||| || ||||| ||||||| ||||
Sbjct: 65 atgaatctagaca-----------ctagattcattaacatctatatgtatgtgggcaatg 113
Query: 132 ctagaatgacttaaattgtgaaatggagggagtac 166
|||||| | |||| ||| ||||| |||||||||||
Sbjct: 114 ctagaaagtcttacattatgaaacggagggagtac 148
Score = 63.9 bits (32), Expect = 7e-10
Identities = 122/154 (79%), Gaps = 11/154 (7%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| |||||||| | || ||||||| |||||| ||||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 72 atgaatctagatagatatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||| ||||||||||||||||| || | |||||||| | ||||
Sbjct: 87 atgaatctag-----------tgtctagattcattaacatctaagtgaatgtgagcaatg 39
Query: 132 ctagaatgacttaaattgtgaaatggagggagta 165
|||||| | |||| ||||||||| ||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 73.8 bits (37), Expect = 7e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
|||||||||||||||| |||| || ||| |||||||| ||||| |||||||||||| |||
Sbjct: 62 tatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatgacttacatt 121
Query: 149 gtgaaatggagggagta 165
| ||| ||||||||||
Sbjct: 122 ataaaacggagggagta 138
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||| | ||||||||||||| || |||||||||||||| ||| |||||||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 72 atgaatctaga 82
||||||||||
Sbjct: 78 gtgaatctaga 68
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||| |||||| |||||||||||| ||| ||||| ||||||||||
Sbjct: 56 atatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||| ||||| ||||| ||||||||||||| || ||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgt 62
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaa 145
|||||||||||||||||||||| | || ||||||||||||| |||| ||||| | ||||
Sbjct: 59 atatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaagtcttat 118
Query: 146 attgtgaaatggagggagta 165
| | ||||| ||||||||||
Sbjct: 119 aatatgaaacggagggagta 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatat 93
|||||||||||| |||| ||||||||||||| | ||||||||
Sbjct: 98 ccacattcatatagatgctaatgaatctagacatatatatat 57
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 71.9 bits (36), Expect = 3e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattc 59
|||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 118 gaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||| || ||||||||||||||| ||||||||| ||||| ||||
Sbjct: 52 gaatgtggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 94 gtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaa 153
|||||||||||||||| || ||||| ||||||| ||||||||||||| ||| ||| ||||
Sbjct: 61 gtctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaa 120
Query: 154 atggagggagta 165
| |||||||||
Sbjct: 121 acagagggagta 132
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 23 tttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaatctaga 82
||||| ||||||| ||||| ||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 121 tttcataatgtaaatcattctagcattgcccacatgcatatagatgttaatgaatctaga 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcatt 49
|||||||||| ||||| ||||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatt 42
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||| || |||| ||||||||||||||||| ||| ||||| ||||| ||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| |||||||||| |||||||| ||| ||||| |||||| |||||||| ||
Sbjct: 109 atacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatt 50
Query: 71 aat 73
|||
Sbjct: 49 aat 47
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 133 tagaatgacttaaattgtgaaatggagggagta 165
|||||||||||| ||||||||| ||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||| |||||| |||| |||||||||||| ||||||||| ||||| ||||
Sbjct: 54 tcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaagta 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcatt 41
|||| ||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 111 tcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||| ||| ||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 85 tcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagta 139
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatg 68
||||| ||||||||||| ||| ||||||||| |||||||||||| ||| |||||||||
Sbjct: 140 atactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacat 57
||||| ||||| ||||| ||||||||||||| ||| |||||||||||
Sbjct: 4 atactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 120 atgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||| |||| ||||||||||||| ||| ||||| ||||||||||
Sbjct: 50 atgtggaaaatactagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 69.9 bits (35), Expect = 1e-11
Identities = 98/118 (83%), Gaps = 2/118 (1%)
Strand = Plus / Minus
Query: 52 ccacattcatattgatgttaatgaatctagatagatatatatgtcta--gattcattaac 109
|||||||||||| |||||||||||||||| | | | |||| ||| || |||||||||||
Sbjct: 120 ccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaac 61
Query: 110 ttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
|| ||||||||||||| ||| |||||| | |||| | | ||||| |||||||||||
Sbjct: 60 atctatatgaatgtgggcaattctagaaagtcttataatatgaaacagagggagtaca 3
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/77 (85%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 52 ccacattcatattgatgttaatgaatc--tagatagatatatatgtctagattcattaac 109
|||||||||||| |||||||||||||| || | | |||| | ||| |||||||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattcattaac 104
Query: 110 ttcaatatgaatgtggg 126
|| |||||||||||||
Sbjct: 105 atctatatgaatgtggg 121
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
|||||||||||||| ||||||| | |||||||||||||||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 86 atatatatgtctagattcattaacttcaatatgaatgtgggaaatg 131
||||||||||||||||| |||| | |||||||||||||||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/54 (88%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 46 cattttccacattcatattgatgttaatgaatctagatagatatatatgtctag 99
||||| ||||||||||||||||| |||| ||||||| | ||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctag--acatatatatgtctag 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 46 cattttccacattcatattgatgttaatgaatctagatagatatat 91
||||| ||||||||||||||||| ||||||| ||||| | ||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| |||||||||||| || || ||||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 72 atgaat 77
||||||
Sbjct: 77 atgaat 72
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 120 atgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct: 83 atgtgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 61.9 bits (31), Expect = 3e-09
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 89 tatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaatt 148
||||| |||||||||| ||| ||| |||| |||||| |||||| |||||||||||| |||
Sbjct: 81 tatatatctagattcactaatttccatataaatgtgagaaatgttagaatgacttatatt 22
Query: 149 gtgaaatggagggagtaca 167
||||| | ||| ||||||
Sbjct: 21 atgaaacgaaggaagtaca 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacat 57
|||| ||||| ||||| ||||||||||||| |||||||| ||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcatttcccacat 83
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtg 151
|||||||||||||||||| | ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 78 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 19
Query: 152 aaatggagggagta 165
||| ||||||||||
Sbjct: 18 aaacggagggagta 5
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 17 cctccatttcacaatgtaagtcattttagcattttccacattcatattgatgttaatgaa 76
||||| ||||| |||||||| | || ||||||| ||||||||||||| |||||||| |||
Sbjct: 103 cctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacgaa 44
Query: 77 tctaga 82
||||||
Sbjct: 43 tctaga 38
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
||||||||||| ||||| || |||||||||||| |||||||||| | |||| ||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 153 aatggaggga 162
|| |||||||
Sbjct: 96 aacggaggga 105
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtg 151
|||||||||||||||||| | ||||||||||||| |||||||||| | |||| | | ||
Sbjct: 55 atgtctagattcattaacgtatatatgaatgtgggcaatgctagaaagtcttataatatg 114
Query: 152 aaatggagggagta 165
||| ||||||||||
Sbjct: 115 aaacggagggagta 128
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||||||||| |||||||||||||| |||||||||||| || || ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 72 atgaat 77
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgctagaa 137
|||||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaa 98
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||||| | | |||| | || ||||||| |||||||||||| ||||||
Sbjct: 127 atacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtt 68
Query: 71 aatgaatctaga 82
||||||||||||
Sbjct: 67 aatgaatctaga 56
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||| | || |||||||| |||| |||||||||| | |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 155 tggagggagtaca 167
||||||||||||
Sbjct: 130 cggagggagtaca 142
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
||||||||| ||||| ||| |||||| || ||||||| || |||||||| |||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 72 atgaatctagat 83
||||||||||||
Sbjct: 65 atgaatctagat 76
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 95 tctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaa 154
||||||||||||||| || |||||||| || | |||||||||| |||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||| |||| | || ||||||| ||| |||||||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 72 atgaatctagat 83
||||||||||||
Sbjct: 80 atgaatctagat 69
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||||||||| ||||||||||||||| ||| ||| |||| |||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 113 aatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagta 165
|||||||||||||||||| ||| ||| ||||| ||||||||| ||||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatatt 64
|||||||||| ||||||||||||||| ||| || |||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||||||||| ||| ||||| ||||||||| |||||||| |||||| ||||||||||
Sbjct: 94 atacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgta 35
Query: 71 aatga 75
|||||
Sbjct: 34 aatga 30
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 102 tcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtgaaatggaggg 161
||||| || ||||||| |||||| ||||||||||||||||||| ||||| ||| |||||
Sbjct: 30 tcatttacatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggagga 89
Query: 162 agta 165
||||
Sbjct: 90 agta 93
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 63.9 bits (32), Expect = 7e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| ||||| ||||||| | |||||||||| |||||||||||| ||||||
Sbjct: 143 atactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtt 84
Query: 71 aatgaatctaga 82
||||||| ||||
Sbjct: 83 aatgaatttaga 72
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
||||||||||||| |||||||||| | |||| ||| ||||| ||||||||||||
Sbjct: 56 atatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagtaca 3
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 93 tgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaattgtga 152
|||||| |||||||||| || ||||||||||||| ||||||| || | ||| ||| |||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 153 aatggagggagta 165
|| ||||||||||
Sbjct: 130 aacggagggagta 142
Score = 44.1 bits (22), Expect = 6e-04
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgt 69
|||| ||||| ||||| |||||||| | || ||||||| |||||||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AC145388.2/115185-115325 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 90 atatgtctagattcattaacttcaatatgaatgtgggaaatgct 133
||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 54 atatgtctagattcattaacttctatgtgaatgtgggcaatgct 11
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgct 133
||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 90 atgtctagattcattaacttctatgtgaatgtgggcaatgct 131
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatat 63
|||||||||| ||||| ||||||||||||| ||||||| || ||||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 88 atatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgacttaaat 147
||||| ||||||||||||||| || ||||| || |||| ||| |||||||||||| ||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 148 tgtgaaatggagggagta 165
| ||||| ||||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 114 atatgaatgtgggaaatgctagaatgacttaaattgtgaaatggagggagtaca 167
|||||||||| | ||||||||||||||||| ||| ||||| ||||| ||||||
Sbjct: 85 atatgaatgtagacaatgctagaatgacttacattatgaaacggaggaagtaca 138
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 12 tacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtta 71
|||| ||||| ||||| ||||||||||||| || ||| ||| || ||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 72 atgaatctaga 82
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AACV01007579.1/212-348 39947:Oryza sativa Japonica
Group
Length = 137
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 90 atatgtctagattcattaacttcaatatgaatgtgggaaatgct 133
||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 86 atatgtctagattcattaacttctatgtgaatgtgggcaatgct 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 92 atgtctagattcattaacttcaatatgaatgtgggaaatgct 133
||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 50 atgtctagattcattaacttctatgtgaatgtgggcaatgct 9
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 61.9 bits (31), Expect = 3e-09
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 83 tagatatatatgtctagattcattaacttcaatatgaatgtgggaaatgctagaatgact 142
||||| ||||||| ||||||||||||| || || | ||||||| |||||||||| ||
Sbjct: 87 tagatgtatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatct 28
Query: 143 taaattgtgaaatggagggagta 165
|| ||||||||| ||||||||||
Sbjct: 27 tacattgtgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 11 atacttcctccatttcacaatgtaagtcattttagcattttccacattcatattgatgtt 70
||||| ||||| |||||||||||||| || ||||||| |||||| | || ||||||
Sbjct: 4 atactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtt 63
Query: 71 aatgaatcta 80
||||||||||
Sbjct: 64 aatgaatcta 73
