miRNEST 2.0, an integrative microRNA resource :: BLAST
>46392_miR398:micropc
Length = 68
Score = 135 bits (68), Expect = 6e-33
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 11 caggggcgagctgggaacacacggtgatgaggcggtctggtctttcgtgtgttctcaggt 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggggcgagctgggaacacacggtgatgaggcggtctggtctttcgtgtgttctcaggt 60
Query: 71 cgcccctg 78
||||||||
Sbjct: 61 cgcccctg 68
>45898_miR398:micropc
Length = 66
Score = 131 bits (66), Expect = 9e-32
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 12 aggggcgagctgggaacacacggtgatgaggcggtctggtctttcgtgtgttctcaggtc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggggcgagctgggaacacacggtgatgaggcggtctggtctttcgtgtgttctcaggtc 60
Query: 72 gcccct 77
||||||
Sbjct: 61 gcccct 66
>45390_miR398:micropc
Length = 73
Score = 65.9 bits (33), Expect = 4e-12
Identities = 68/73 (93%), Gaps = 5/73 (6%)
Strand = Plus / Plus
Query: 11 caggggcgagctgggaacacacggtgat-gaggcggtct-ggt-ct-ttcgtgtgttct- 65
|||||||||||||||||||||||||||| |||||||||| ||| || ||||||||||||
Sbjct: 1 caggggcgagctgggaacacacggtgatagaggcggtctaggtactattcgtgtgttcta 60
Query: 66 caggtcgcccctg 78
|||||||||||||
Sbjct: 61 caggtcgcccctg 73
>46795_miR398:micropc
Length = 101
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 cgtgtgttctcaggtcgcccctg 78
|||||||||||||||||||||||
Sbjct: 79 cgtgtgttctcaggtcgcccctg 101
>45694_miR398:micropc
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 cgtgtgttctcaggtcgcccct 77
||||||||||||||||||||||
Sbjct: 78 cgtgtgttctcaggtcgcccct 99
>46725_miR398:micropc
Length = 67
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccctg 67
>46604_miR398:micropc
Length = 67
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccctg 67
>46371_miR398:micropc
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
>46116_miR398:micropc
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
>46034_miR398:micropc
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
>45519_miR398:micropc
Length = 61
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 41 tgtgttctcaggtcgcccctg 61
>45422_miR398:micropc
Length = 78
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctg 78
>45294_miR398:micropc
Length = 98
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 78 tgtgttctcaggtcgcccctg 98
>44891_miR398:micropc
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 69 tgtgttctcaggtcgcccctg 89
>46690_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46686_miR398:micropc
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcgcccct 96
>46367_miR398:micropc
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccctg 78
||||||||||||||||||||
Sbjct: 54 gtgttctcaggtcgcccctg 73
>46304_miR398:micropc
Length = 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 40 tgtgttctcaggtcgcccct 59
>46303_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46114_miR398:micropc
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 46 tgtgttctcaggtcgcccct 65
>46111_miR398:micropc
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccct 76
>46074_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>45930_miR398:micropc
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccctg 78
||||||||||||||||||||
Sbjct: 44 gtgttctcaggtcgcccctg 63
>45192_miR398:micropc
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 46 tgtgttctcaggtcgcccct 65
>45095_miR398:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 68 tgtgttctcaggtcgcccct 87
>45087_miR398:micropc
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccctg 78
||||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccctg 84
