miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48963_osa-miR398b:pmrd
Length = 88
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 ggagttcctacaggggcgagctgggaacacacggtgatgaggcggtctggtctttcgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagttcctacaggggcgagctgggaacacacggtgatgaggcggtctggtctttcgtgt 60
Query: 61 gttctcaggtcgcccctgccgggactct 88
||||||||||||||||||||||||||||
Sbjct: 61 gttctcaggtcgcccctgccgggactct 88
>51746_ptc-miR398c:pmrd
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctgccggg 83
||||||||||||||||||||||||||
Sbjct: 68 tgtgttctcaggtcgcccctgccggg 93
>51745_ptc-miR398b:pmrd
Length = 85
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctgccggg 83
||||||||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccctgccggg 81
>54876_vvi-miR398c:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctgc 79
||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgc 79
>54875_vvi-miR398b:pmrd
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctgc 79
||||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccctgc 79
>46890_aqc-miR398b:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctgc 79
||||||||||||||||||||||
Sbjct: 72 tgtgttctcaggtcgcccctgc 93
>48749_mtr-miR398a:pmrd
Length = 77
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccctg 77
