miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 194 bits (98), Expect = 3e-49
Identities = 140/154 (90%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||| |||||||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 159 bits (80), Expect = 2e-38
Identities = 128/144 (88%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||| ||| ||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatctat 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||||||||||||||||| ||||||||| |||||| ||
Sbjct: 75 acatatatatttatctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 135 ttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 192 bits (97), Expect = 1e-48
Identities = 133/144 (92%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||||||||||||||||| |||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||
Sbjct: 88 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
Score = 129 bits (65), Expect = 1e-29
Identities = 125/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | | ||||||||||||||||||||| | ||| |||||| |||||| ||
Sbjct: 75 acatatatatctatatagatttattaacatcaatat--aaatgtgaaatgctagaatgac 132
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 133 ttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 192 bits (97), Expect = 1e-48
Identities = 133/144 (92%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||||||||||||||||| |||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttc--acatttatattgatgttaataaatctat 72
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||
Sbjct: 73 atagatatatatgtctagattcattaacatcaatatgaatatgggaaatgcttgaatgac 132
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 133 ttacattgtgaaacggagggagta 156
Score = 129 bits (65), Expect = 1e-29
Identities = 125/144 (86%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattcaagcatttcccatattcatattgatgttaatgaatctag 87
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | | ||||||||||||||||||||| | ||| |||||| |||||| ||
Sbjct: 86 acatatatatctatatagatttattaacatcaatat--aaatgtgaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 190 bits (96), Expect = 4e-48
Identities = 132/144 (91%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||| ||||||| |||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacattttccacattcatattgatattaatgaatctaa 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| |||||||||| ||||||| ||||||||| |||||| ||
Sbjct: 88 atagatatatatgtctagattcattaacatcactatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
Score = 143 bits (72), Expect = 9e-34
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| ||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | | |||||| ||||| |||||||||||| ||| ||||| |||||| ||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtggaaaatgttagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 188 bits (95), Expect = 2e-47
Identities = 143/159 (89%)
Strand = Plus / Plus
Query: 6 tgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||||| |||||||| ||||||||||| || |||| |||||| ||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgt 62
Query: 66 taatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaa 125
||||||||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||
Sbjct: 63 taatgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaa 122
Query: 126 tggtagaataacttacattgtgaaacggagggagtatat 164
| |||||| |||||||||||||||||||||||||||||
Sbjct: 123 tactagaatgacttacattgtgaaacggagggagtatat 161
Score = 143 bits (72), Expect = 9e-34
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||| ||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| ||||||||||||||| || ||| ||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 182 bits (92), Expect = 1e-45
Identities = 131/144 (90%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||| ||| |||||||||||||||||| |||||||| |||||| ||
Sbjct: 75 atagatatatatgtctacattcattaacatcaatatgaatgtgggaaatattagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 135 ttacattgtgaaacggaggaagta 158
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| ||| |||||||||||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || | | |||||| | |||||||| |||||||||||||||||| |||||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || |||||||||||| ||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||||||||||||||||||||| |||||||||||||||||| |||| ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|| ||| ||||||||||||||||||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagggagta 5
Score = 143 bits (72), Expect = 9e-34
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagcattacccacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||||||| ||||||||| ||||||||| || ||| ||
Sbjct: 75 acatatatatctatctagattcattaacattaatatgaatgtgggaaatgctaaaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||| ||||||||||||||| ||||
Sbjct: 135 ttatattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 176 bits (89), Expect = 7e-44
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||
Sbjct: 161 atgtacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatg 102
Query: 65 ttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaa 124
|||||||||||| ||||| ||||||||||||||| || ||||||||||| ||| ||||||
Sbjct: 101 ttaatgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaa 42
Query: 125 atggtagaataacttacattgtgaaacggagggagtatata 165
||| | ||| |||||| |||||||||||||||||||||||
Sbjct: 41 atgcaaaaatgacttactttgtgaaacggagggagtatata 1
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||||||| | |||||||||||||||||||||||| |||||||||
Sbjct: 15 gtttcacaaagtaagtcatttttgcatttcccacatttatattgatgtttatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||| | | |||||||| |||||||||||||| ||| ||||||||| || ||| ||
Sbjct: 75 acatatatttctatctagattcattaacatcaatataaatgtgggaaatgctaaaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
|||| |||||||||||||| ||||
Sbjct: 135 ttactttgtgaaacggaggaagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 130/144 (90%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgttgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||| ||
Sbjct: 75 atagatatatatgtctagattcattaccatcaatatgaatgtgggaaatggtggaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||| ||||||
Sbjct: 135 ttacattatgaaacggaaggagta 158
Score = 145 bits (73), Expect = 2e-34
Identities = 127/145 (87%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| | |||||||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattccaccatttcccacattcatattgatggtaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| ||||||| |||||||||| ||||||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacaacaatatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 174 bits (88), Expect = 3e-43
Identities = 130/144 (90%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| |||||| |||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagtatttttcacattcatattgattttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||| ||
Sbjct: 88 atagatatatatgtctagattcattaatatcaatatgaatgtgggaaatgttagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
Score = 143 bits (72), Expect = 9e-34
Identities = 126/144 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||||||||||| |||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatattaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| ||||| |||||||||||| || |||| |||||| ||
Sbjct: 75 acatatatatctatctagattcattaaaatcaatatgaatgtgaaaaatactagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| ||||||||||| || |||||||||||| ||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtt 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
|||||||||| ||||||||||||||||||||| |||||||| ||||||||| ||| |||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaat 123
Query: 127 ggtagaataacttacattgtgaaacggagggagta 161
| |||||| ||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||| ||||||| ||||| |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattctccacattcatattaatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| ||||||| ||||||||| ||||||||| || ||| ||
Sbjct: 88 acatatatatctatctagattcattaacactaatatgaatgtgggaaatgctaaaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 170 bits (86), Expect = 4e-42
Identities = 113/122 (92%)
Strand = Plus / Plus
Query: 44 tttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatta 103
||||||||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 40 tttcccacattcatattgatattaatgaatctagatagatatatatgtctagattcatta 99
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
|||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 100 acatcaatatgaatgtggaaaatattagaatgacttacattgtgaaacggagggagtata 159
Query: 164 ta 165
||
Sbjct: 160 ta 161
Score = 145 bits (73), Expect = 2e-34
Identities = 128/145 (88%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||| ||||||| |||||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaatattttccacattcatattgatgttaatgaatctag 88
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| ||||| |||||||||||| ||||||| |||||||||
Sbjct: 87 acatatatatctatctagattcattaatatcaatatgaatgtgggaaa-actagaataac 29
Query: 138 ttacattgtgaaacggagggagtat 162
||||||||| |||||||||||||||
Sbjct: 28 ttacattgtaaaacggagggagtat 4
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 139/157 (88%)
Strand = Plus / Plus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 2 atgtacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatg 61
Query: 65 ttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaa 124
|||||||||||| | | |||||| | |||||||| ||||| |||||||||||| ||||||
Sbjct: 62 ttaatgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaa 121
Query: 125 atggtagaataacttacattgtgaaacggagggagta 161
||| |||||| ||||||||||||| ||||||||||||
Sbjct: 122 atgctagaatgacttacattgtgatacggagggagta 158
Score = 161 bits (81), Expect = 4e-39
Identities = 126/141 (89%)
Strand = Plus / Minus
Query: 21 tcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctatata 80
||||| ||||||||||| || |||||||||||| |||||||| |||||||||||| |||
Sbjct: 145 tcacaatgtaagtcattctagcatttcccacattcatattgatattaatgaatctagata 86
Query: 81 gatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataactta 140
|||||||||||||||||| |||||||||||||| ||| ||||||||| | ||| |||||
Sbjct: 85 gatatatatgtctagattcattaacatcaatataaatgtgggaaatgcaaaaatgactta 26
Query: 141 cattgtgaaacggagggagta 161
|||||||||||||||| ||||
Sbjct: 25 cattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 130/145 (89%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaccatttctcacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| ||||| ||||| |||||| | | ||||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcattaatatcaacatgaatttagaaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagtat 159
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| | | ||| || ||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttctaaattcatgttgatattaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||||||||||||||||| || ||||||||||||| ||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatgaatgtgagaaatggtagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaaggagta 5
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 137/155 (88%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| | ||||||||| || ||||| |||||| |||||||| |
Sbjct: 4 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatact 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
|||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||| ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaat 123
Query: 127 ggtagaataacttacattgtgaaacggagggagta 161
| |||||| ||||||||||||||||||||||||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||| ||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctaacatttaccacattcatattgatgctaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||| |||||||||||| || |||||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattagtatcaatatgaatgtgagaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||| ||||||||||||||| ||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 163 bits (82), Expect = 1e-39
Identities = 137/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | ||| |||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 65 atgaatctagc-acatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
Score = 151 bits (76), Expect = 4e-36
Identities = 128/144 (88%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaa 88
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | || ||| || ||||||| |||||||||||||||||| ||||||||| |||||| ||
Sbjct: 87 acatatgtatgtg-ctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || ||||| |||||| |||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 124/145 (85%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctatcatttcccacattcatattgatattaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||||| |||||||| || |||||| |||||| ||
Sbjct: 75 acatatatatctatctagattcattaactaatatatgaatgtgagaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagtat 162
||||||||||||||||||| |||||
Sbjct: 135 ttacattgtgaaacggaggaagtat 159
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||| ||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||| |||| ||||||||||||||||||||| |||| ||||||||||||||| | |||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
Score = 105 bits (53), Expect = 2e-22
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| | ||||||||| || |||| | | ||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatataagtcattctagcattttctatattcatattgatgctaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||| | ||||||||||||| |||| ||| ||||| |||||| ||
Sbjct: 88 acatatatatctatctagagtcattaacatcaatacgaatgtggaaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagtat 162
||||||||||||||||||| |||||
Sbjct: 28 ttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 6 tgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||||| |||||||| ||||||||||| || |||||||||||| ||||||| ||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgt 62
Query: 66 taatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaa 125
||||||||||| |||||||||||| |||||||| |||| ||||||||| ||| |||||||
Sbjct: 63 taatgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaa 122
Query: 126 tggtagaataacttacattgtgaaacggagggagta 161
| || ||| ||||| ||||||||||||||||||||
Sbjct: 123 ttctaaaatgacttagattgtgaaacggagggagta 158
Score = 151 bits (76), Expect = 4e-36
Identities = 127/144 (88%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| | ||||||||| || ||||||||||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatctaagtcattttagaatttcccacattaatattgatggtaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||||| ||||||||||| ||||||||| |||||| ||
Sbjct: 88 aaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 128/144 (88%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||||||||||| |||| ||||||| ||||| || ||||| ||| ||
Sbjct: 15 gtttcacaatgtaagtcattatagcattttccacattcatatttatattaataaatttag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| ||||||||||||||||| |||||||||||||||||| ||||||||| |||||| ||
Sbjct: 75 ctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagta 158
Score = 137 bits (69), Expect = 6e-32
Identities = 126/145 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | ||| ||||||||| || ||||||||| ||| ||||| || ||| ||
Sbjct: 88 acatatatatttagctaaatttattaatataaatatgaatgtggaaaatgctataatgac 29
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 136/155 (87%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| ||||||||||| || ||| |||| ||| |||| ||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtt 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
|||||||||| | |||||||||||||||||| |||||||| ||||||||| || |||||
Sbjct: 64 aatgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaat 123
Query: 127 ggtagaataacttacattgtgaaacggagggagta 161
| |||||| ||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||| ||||| |||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattaatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| ||||||| ||||||||| ||||||||||||| |||| |||||| ||
Sbjct: 88 acatatatatccaactagattcattaacatccatatgaatatgggtaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 157 bits (79), Expect = 6e-38
Identities = 136/155 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||| | ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||||||||| ||||||| ||| |||||||||||||||||| || | |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagtat 162
|||||| |||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || || | || |||| |||||||||||||||||| ||
Sbjct: 148 gtttcacaatgtaagtcattctagcatattccgcattcatattgatgttaatgaatatag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | ||||| | |||||||| |||||||||||||||||||| ||||||| |||||| ||
Sbjct: 88 acatctatatctatctagattcattaacatcaatatgaatataggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| ||| ||| ||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||| |||||||| |||||||| ||||| |||||||||||| |||||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||| ||||||||||||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
Score = 129 bits (65), Expect = 1e-29
Identities = 134/157 (85%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| |||||||| | ||||||||| || |||||||||||| ||||||||
Sbjct: 161 atgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgata 102
Query: 65 ttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaa 124
|||||||||||| ||| |||||| | |||||||| |||||||| ||||||||| ||| ||
Sbjct: 101 ttaatgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaa 42
Query: 125 atggtagaataacttacattgtgaaacggagggagta 161
| | |||||| ||||| ||||||||||||||| ||||
Sbjct: 41 aagttagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 155 bits (78), Expect = 2e-37
Identities = 136/154 (88%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| ||||| || ||||||||||| || ||||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||||| |||||| |||||||| |||||||| ||||| |||||||||||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
Score = 137 bits (69), Expect = 6e-32
Identities = 127/145 (87%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||||||| ||||||||| |||||||||||||||
Sbjct: 147 gtttcacaatgtaagtcattctaacatttcccatatttatattaatgttaatgaatctag 88
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| |||| | | |||||||| |||| ||||||||||||| || |||||| |||||| ||
Sbjct: 87 atatatat-tctatctagattcattaccatcaatatgaatgtgagaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||| |||||||||| |||||
Sbjct: 28 ttacattgcgaaacggaggaagtat 4
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 155 bits (78), Expect = 2e-37
Identities = 96/102 (94%)
Strand = Plus / Plus
Query: 60 tgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatat 119
||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |
Sbjct: 61 tgatgttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgt 120
Query: 120 gggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 121 gggaaatgctagaatgacttacattgtgaaacggagggagta 162
Score = 125 bits (63), Expect = 2e-28
Identities = 127/148 (85%), Gaps = 4/148 (2%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| ||| |||||||||||||||||
Sbjct: 152 gtttcacaatgtaagtcattctagcatttcccacattcatagtgatgttaatgaatctag 93
Query: 78 atagatatatatgtctagatttattaacatca----atatgaatatgggaaatggtagaa 133
| | |||||| | |||||||| |||||||||| |||||||||| |||||| |||||
Sbjct: 92 acatatatatctatctagattcattaacatcactatgtatgaatatgcgaaatgctagaa 33
Query: 134 taacttacattgtgaaacggagggagta 161
| ||||||||||||||||||||| ||||
Sbjct: 32 tgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 153 bits (77), Expect = 1e-36
Identities = 104/113 (92%)
Strand = Plus / Minus
Query: 49 cacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatc 108
|||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||| |
Sbjct: 117 cacattcatattgatattaatgaatctaaatagatatatatgtctagattcattaacacc 58
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 57 aatataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 127 bits (64), Expect = 5e-29
Identities = 124/144 (86%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattggtgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | | |||||| ||||| |||||||||||| || ||||| |||||| ||
Sbjct: 75 acatatatatctatttagattcattaatatcaatatgaatgtgaaaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||| |||||| |||||||||||||
Sbjct: 135 ttatattgtggaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || |||||||||||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||||||||||||||||||||| |||| ||||||||| ||| || |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagtata 163
|||||| |||| ||||||||||||||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagggagtata 160
Score = 113 bits (57), Expect = 8e-25
Identities = 99/113 (87%)
Strand = Plus / Minus
Query: 49 cacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatc 108
|||||||||||||||| ||||||||||| | | |||||| | |||||||| ||||||||
Sbjct: 117 cacatttatattgatgataatgaatctagacatatatatctatctagattcattaacata 58
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| ||||||||| || ||| ||||| ||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctacaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 99/107 (92%)
Strand = Plus / Plus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 53 atattgatgttaatgaatctagatagatatatatgtctagattcattaatatcaatatga 112
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|| |||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 113 atgtgggaaatactagaatgtcttacattgtgaaacggagggagtat 159
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||| |||| || |||||||||||| |||||||| ||||||||||||
Sbjct: 148 gtttcacaatgtaagacattctagtatttcccacattcatattgatattaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||||||||||||| || | |||| |||||| ||
Sbjct: 88 acatatatatctatctagattcattaacatcaatatttctagtgaaaatactagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 149 bits (75), Expect = 1e-35
Identities = 120/135 (88%)
Strand = Plus / Plus
Query: 27 tgtaagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatata 86
||||||||||| ||| |||||||||||| |||| | |||||||||||||| ||| |||||
Sbjct: 24 tgtaagtcattctaacatttcccacattcatataggtgttaatgaatctagatatatata 83
Query: 87 tatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgt 146
||||||||||| ||||||| | |||||||| ||| ||||| |||||| |||||||||||
Sbjct: 84 gatgtctagattcattaacacctatatgaatgtggaaaatgctagaatgacttacattgt 143
Query: 147 gaaacggagggagta 161
|||||||||||||||
Sbjct: 144 gaaacggagggagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 122/144 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||||||| |||| | ||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatataggtgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | ||||||| |||||||| ||||||| | |||||||| ||||||||| |||||| ||
Sbjct: 88 acatctatatatatctagattcattaacacctatatgaatgtgggaaatgttagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| || |||||| ||||||
Sbjct: 28 ttacattatggaacggaaggagta 5
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 147 bits (74), Expect = 6e-35
Identities = 101/110 (91%)
Strand = Plus / Minus
Query: 30 aagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatatat 89
|||||||| || |||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 90 gtctagatttattaacatcaatatgaatatgggaaatggtagaataactt 139
||||||||| |||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 30 aagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatatat 89
|||||||| || |||||||||||| ||||||||||||||||||||| | | |||||| |
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 90 gtctagatttattaacatcaatatgaatatgggaaatggtagaataactt 139
| |||||| |||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 126/144 (87%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||| |||||| |||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttgatgaatctaa 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| ||||| ||||||||||| ||||||||| |||||||| || |||||| || ||| ||
Sbjct: 88 atatatatagatgtctagattcattaacatctatatgaatgtgagaaatgataaaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||| ||||||||||||||||||
Sbjct: 28 ttacaatgtgaaacggagggagta 5
Score = 137 bits (69), Expect = 6e-32
Identities = 126/145 (86%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||| |||| ||||||||||||||||
Sbjct: 15 gtttcacattgtaagtcattttatcatttctcacattcatatagatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | ||||||| | |||||| || |||||| |||||||| ||||||||| |||||| ||
Sbjct: 75 acatctatatatatttagattcatcaacatctatatgaatgtgggaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 141 bits (71), Expect = 4e-33
Identities = 134/154 (87%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| ||| |||| ||||||||||| || |||| | ||||| ||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || | | |||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 65 atgaatgtagaca--tatatatgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| |||||||||||| |||||||||||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
Score = 139 bits (70), Expect = 1e-32
Identities = 139/161 (86%), Gaps = 2/161 (1%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| ||| |||| ||||||||||| || |||||||||||| |||||||||
Sbjct: 159 atgtactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatg 100
Query: 65 ttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaa 124
|||||||||||| | | |||||||||||| ||| |||||||||||||||||| | | ||
Sbjct: 99 ttaatgaatctagaca--tatatatgtctacattcattaacatcaatatgaatgtagaaa 42
Query: 125 atggtagaataacttacattgtgaaacggagggagtatata 165
||| |||||| |||||||||||| |||||||| ||||||||
Sbjct: 41 atgctagaatgacttacattgtggaacggaggaagtatata 1
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | |||||||||||||||||| |||| |||||||||| || || ||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|| ||| ||||||||||||||||||||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
Score = 123 bits (62), Expect = 9e-28
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| ||||| ||||||||| |||||||||||
Sbjct: 148 gtttcacaatgtaagtcattttagcatttctcacatccatattgatgctaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| ||||||||| ||||| || | ||||||| ||||||||| |||||| ||
Sbjct: 88 acatatatatccgtctagattcattaatataagtatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagtata 163
||||||||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagtata 3
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| ||| |||||| ||||||||| || |||| ||| ||| ||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || |||||||||||||| |||||| |||| |||||||||||||||| ||||||
Sbjct: 65 atgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||| |||||| |||||||||||||
Sbjct: 125 ttagaatgacttatattgtggaacggagggagta 158
Score = 89.7 bits (45), Expect = 1e-17
Identities = 111/133 (83%)
Strand = Plus / Minus
Query: 29 taagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatata 88
||||||||| ||| ||||| || ||| ||||||||| ||||||||||| | | ||||||
Sbjct: 137 taagtcattctaacatttctcatattcatattgatgctaatgaatctaaacatatatatc 78
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
| |||| ||| |||| ||||||||||||||||| |||| |||||| ||||| | ||||
Sbjct: 77 tatctaaattcattagcatcaatatgaatatggaaaatactagaatgacttatactgtgg 18
Query: 149 aacggagggagta 161
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 139 bits (70), Expect = 1e-32
Identities = 100/110 (90%)
Strand = Plus / Plus
Query: 30 aagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatatat 89
|||||||| || ||||| |||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 90 gtctagatttattaacatcaatatgaatatgggaaatggtagaataactt 139
||||||||| |||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 30 aagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatatat 89
|||||||| || |||||||||||| ||||||||||||||||||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 90 gtctagatttattaacatcaatatgaatatgggaaatggtagaataactt 139
|||||||| |||||||||||||||||| || |||||| |||||| ||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 137 bits (69), Expect = 6e-32
Identities = 133/154 (86%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| || || |||||||| |||||||||||||||||| |||||||||
Sbjct: 65 atgaatcta----gacat-----tctagattcattaacatcaatatgaatgtgggaaatg 115
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 116 ctagaatgacttacattgtgaaacggagggagta 149
Score = 135 bits (68), Expect = 2e-31
Identities = 124/144 (86%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 80
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| ||||||||||| |||||||||||||||||| ||||||||| |||||| ||
Sbjct: 79 a---------atgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 137 bits (69), Expect = 6e-32
Identities = 96/104 (92%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 58 attgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaat 117
||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct: 48 attgatgttaatgaatctagatagatat--atgtctagattcattaacatcaatatgaat 105
Query: 118 atgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||| || ||| ||||| ||||||||||||||||||||
Sbjct: 106 atgggaaatgctaaaatgacttatattgtgaaacggagggagta 149
Score = 69.9 bits (35), Expect = 1e-11
Identities = 80/94 (85%), Gaps = 2/94 (2%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| | ||||||||| || |||||||| ||| ||||||||||||||||||| |
Sbjct: 139 gtttcacaatataagtcattttagcatttcccatattcatattgatgttaatgaatc--t 82
Query: 78 atagatatatatgtctagatttattaacatcaat 111
| | |||||| | |||||||| ||||||||||||
Sbjct: 81 agacatatatctatctagattcattaacatcaat 48
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 137 bits (69), Expect = 6e-32
Identities = 134/156 (85%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 6 tgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||||| |||||||| ||||||||||| || |||||||||||| |||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgc 62
Query: 66 taatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaa 125
|||||||||| | ||||||||||||||| |||| ||||||||||||| | |||||
Sbjct: 63 taatgaatct------agatatatgtctagattcattagcatcaatatgaatgtaggaaa 116
Query: 126 tggtagaataacttacattgtgaaacggagggagta 161
|| |||||| ||||| ||||||||||||||||||||
Sbjct: 117 tgctagaatgacttatattgtgaaacggagggagta 152
Score = 111 bits (56), Expect = 3e-24
Identities = 123/144 (85%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| | ||||||||| || |||||| ||||| ||||||||| |||||||||||
Sbjct: 142 gtttcacaatataagtcattctagcatttcctacattcatattgatgctaatgaatcta- 84
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| |||||| ||||||| |||| ||||||||||||| ||||||||| |||||| ||
Sbjct: 83 ---gacatatat--ctagattcattagcatcaatatgaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 124/143 (86%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||||| | ||| |||| || |||| |||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttcctatattcatatagaggttagtgaatctat 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||||||||| | |||| || |||||||| ||||||||| |||||| ||
Sbjct: 75 atagatatatatgtctagattcactaacctccatatgaatgtgggaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagt 160
||||||| |||||||||||||||
Sbjct: 135 ttacattatgaaacggagggagt 157
Score = 103 bits (52), Expect = 8e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||||||||||| |||| || |||| ||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcatttcccacattcatatggaggttagtgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | | |||||| | |||| || |||||||||| ||||||| |||||| ||
Sbjct: 88 acatatatatctatatagattcactaacctctatatgaatataggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||||||||
Sbjct: 28 ttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| |||| |||||| || ||| ||||||| |||| |||| |
Sbjct: 4 gtacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgct 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
|||||||||| | ||||||| ||||||||| |||||||||||||||||| ||| ||||
Sbjct: 64 aatgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaat 123
Query: 127 ggtagaataacttacattgtgaaacggagggagta 161
| |||||| ||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagggagta 158
Score = 119 bits (60), Expect = 1e-26
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||||||| |||||||||||||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| ||||||||| ||||||| |||| |||| |||||||| ||| |||| |||||| ||
Sbjct: 88 acttatatatatgcctagattcattagcatctatatgaatgtggacaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
|||||||||||||||||| ||||
Sbjct: 28 atacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 133 bits (67), Expect = 9e-31
Identities = 133/154 (86%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || ||||||||| |||||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||||| | | || ||| ||||||| |||||||||||||||||| |||||||||
Sbjct: 96 atgaatctggacatatgcctat--ctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 4e-30
Identities = 126/145 (86%), Gaps = 2/145 (1%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|||| |||| ||| ||||| |||||||||||||| || ||||||||| |||||| ||
Sbjct: 75 ataggcatat--gtccagattcattaacatcaatataaacgtgggaaatgctagaatgac 132
Query: 138 ttacattgtgaaacggagggagtat 162
||| ||||||||||||||| |||||
Sbjct: 133 ttatattgtgaaacggaggaagtat 157
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 133 bits (67), Expect = 9e-31
Identities = 85/91 (93%)
Strand = Plus / Minus
Query: 71 aatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatggta 130
|||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||| ||
Sbjct: 95 aatctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatgcta 36
Query: 131 gaataacttacattgtgaaacggagggagta 161
|||| ||||||||| ||||||||||||||||
Sbjct: 35 gaatgacttacattatgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 111 tatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||| ||||||||| |||||| ||||||||||| ||||||||| ||||
Sbjct: 95 tatgaatgtgggaaatgctagaatgacttacattgtaaaacggaggaagta 145
Score = 60.0 bits (30), Expect = 1e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| |||||| | ||||||||||| || ||||| || ||| |||||||||
Sbjct: 2 atgtactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatg 61
Query: 65 ttaatgaatctatatagatatatatgtctagatt 98
|||||||||||| | | |||||| | ||||||||
Sbjct: 62 ttaatgaatctagacatatatatctatctagatt 95
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 98/109 (89%)
Strand = Plus / Minus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
||||||||| ||||||||||| ||||||||||||||||||||| ||| |||| ||||||
Sbjct: 110 atattgatgctaatgaatctagatagatatatatgtctagattcattggcatcgatatga 51
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
|| ||| ||||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 50 atgtggaaaatgctagaatgacttacattatgaaacggagggagtatat 2
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||| ||||||| |||| |||| ||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||| |||||||||| || || ||| ||||||| ||
Sbjct: 75 acatatatatctatctagattcattagcatcaatatggatgtgaacaatagtagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||||||||
Sbjct: 135 ttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 129 bits (65), Expect = 1e-29
Identities = 126/148 (85%), Gaps = 10/148 (6%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| ||||||||||||||||||
Sbjct: 138 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaat---- 83
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||||||||||| |||||||| ||||| ||| ||||||||| |||||| ||
Sbjct: 82 ------atatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagtatata 165
||||||||||||||||||| ||||||||
Sbjct: 28 ttacattgtgaaacggaggaagtatata 1
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%), Gaps = 10/154 (6%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| || |||||| ||| |||||||||||||||||| |||||||||
Sbjct: 65 atgaatcta----gacatatat------attcattaacatcaatatgaatgtgggaaatg 114
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| |||||||||||||||||| |||||||
Sbjct: 115 ctagaatgacttacattgtgaaacggggggagta 148
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 133/156 (85%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || ||| ||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || ||| | || | |||||||||| ||||||||| ||||||||||||| ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagtata 163
|||||| ||||||||| ||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagtata 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || ||| |||| ||| |||| ||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattacccatattcatatagatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | | || ||| |||| ||| ||||||||| ||||| || |||| |||| |||||| ||
Sbjct: 88 acacacatctatatctaaattcattaacatctatatgtatgtgggcaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 127 bits (64), Expect = 5e-29
Identities = 132/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || |||||||||||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|| |||| ||||||||| ||||||||||||||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
Score = 75.8 bits (38), Expect = 2e-13
Identities = 118/144 (81%), Gaps = 3/144 (2%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| | |||||||||||| ||||||||| |||| |||||
Sbjct: 145 gtttcataatgtaagtcattccaccatttcccacattcatattgatgccaatggatctag 86
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| ||||| | |||||||| |||| |||||||||||| |||||||| |||||| ||
Sbjct: 85 ac---tatatctatctagattcattagtatcaatatgaatgtgggaaatactagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||| ||||||||||||||| ||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 125 bits (63), Expect = 2e-28
Identities = 125/146 (85%), Gaps = 6/146 (4%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||||||||||| |||||||||| ||||||||||
Sbjct: 142 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtcaatgaatctag 83
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| |||| ||||||||| ||| |||||||||||||| ||||||||| |||||| ||
Sbjct: 82 acagat------gtctagattcattgacatcaatatgaatgtgggaaatgatagaatgac 29
Query: 138 ttacattgtgaaacggagggagtata 163
||||||||||||||||||| ||||||
Sbjct: 28 ttacattgtgaaacggaggaagtata 3
Score = 125 bits (63), Expect = 2e-28
Identities = 131/154 (85%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| |||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | | |||||||||| ||| |||||||||||||| |||||||||
Sbjct: 65 atgaatctagaca------tctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||| ||||||||||||||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || | | | |||||| |||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||| || | |||||||||||| ||||||||| |||||||||| || ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || ||| || | ||| |||| ||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | | | |||| |||||||| ||||||||| |||||||| || | | || |||||| ||
Sbjct: 75 acatagacatatatctagattcattaacatccatatgaatgtgagcattgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 135 ttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 67 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 126
Query: 149 aacggagggagta 161
|||||||||||||
Sbjct: 127 aacggagggagta 139
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 112 atgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 54 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || |||||||| ||| |||||||||||||||||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 71
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 121 bits (61), Expect = 3e-27
Identities = 123/144 (85%), Gaps = 6/144 (4%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||||||| |||| ||||||||||| | ||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatatcgatgttaatgagtttag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||| |||||||||||| |||||||||||||||||| ||||| |||||| ||
Sbjct: 75 atagatacatatgtctagat------acatcaatatgaatatggaaaatgctagaatgac 128
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 129 ttacattgtgaaacggaggaagta 152
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||||||| |||||||| ||| ||||| |||||| ||||||||||||||||||||||||
Sbjct: 66 attaacatcgatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 124/145 (85%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||| | | ||| |||| |||| ||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacattttctatattcatatagatgctaatgaatctat 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| |||||||||| || ||| |||| |||| |||||||| ||| ||||| |||||| ||
Sbjct: 75 acgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggagggagtat 159
Score = 113 bits (57), Expect = 8e-25
Identities = 123/145 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||||||| |||| |||| |||||||| ||
Sbjct: 148 gtttcacaatgtaagtcattctagcattttccacattcatatagatgctaatgaatttaa 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| || |||||| |||| |||| |||||||||| | ||||| |||||| ||
Sbjct: 88 acatatatatgcgtatagattcattagcatctatatgaatatagaaaatgttagaatgac 29
Query: 138 ttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 77 tgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtga 18
Query: 149 aacggagggagta 161
|||||||||||||
Sbjct: 17 aacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || |||||||| ||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccatattcatattgatgttaatgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 112 atgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||||||| |||||| ||||||||| ||||||||||| |||||
Sbjct: 90 atgaatatgggaaatgctagaatgacttacattatgaaacggaggaagtat 140
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 74/79 (93%)
Strand = Plus / Minus
Query: 83 tatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttaca 142
|||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||
Sbjct: 83 tatatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttaca 24
Query: 143 ttgtgaaacggagggagta 161
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggaggtagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| |||||||| ||||||||||| || |||||||||||| |||||||||
Sbjct: 2 atgtactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatg 61
Query: 65 ttaatgaatcta 76
||||||||||||
Sbjct: 62 ttaatgaatcta 73
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 123 aaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 102 aaatgctagaatgacttacattgtgaaacggaggaagta 140
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 125/147 (85%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||| ||||| |||| |||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagtatttttcacatccatatcgatgctaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| ||||||||||||||||| ||| |||| |||||||| ||| ||||| |||||| ||
Sbjct: 88 ataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagtatat 164
||||||| |||||||||||||||||||
Sbjct: 28 ttacattatgaaacggagggagtatat 2
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||| ||||||| |||| |||| ||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattttccacattcatatcgatgccaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| | |||||||| |||| |||| ||||| || || |||| |||||| ||
Sbjct: 75 acatatatatttatctagattcattagcatcgatatggatgtgaaaaatactagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||||||||
Sbjct: 135 ttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 67/72 (93%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct: 70 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattatgaaa 129
Query: 151 cggagggagtat 162
|||||| |||||
Sbjct: 130 cggaggaagtat 141
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || ||| ||||||| ||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || ||| | || | |||||||||| ||||||||| |||||||| | || ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 118/144 (81%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || ||| || ||||| |||| ||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcattaccaacattcatatagatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | | || ||| |||| ||| ||||||||| |||| || |||| |||| |||||| ||
Sbjct: 75 acacacatctatatctaaattcattaacatctatatatatgtgggcaatgctagaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 135 ttacattatgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || | | | |||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| ||| || | ||| |||||||| ||||||||| |||||||||| || ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || ||| || | ||| |||| ||||||||||||||||
Sbjct: 148 gtttcataatgtaagtcattctagcattgcctatattcatatagatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| | | |||| |||||||| ||||||||| |||||||| || | | || |||||| ||
Sbjct: 88 atatagacatatatctagattcattaacatccatatgaatgtgagcattgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 115 bits (58), Expect = 2e-25
Identities = 131/156 (83%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||| || || ||| | ||| || |||||||||||||||||| ||||||||
Sbjct: 91 atgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaata 39
Query: 128 gtagaataacttacattgtgaaacggagggagtata 163
|||||| ||||| ||||||||||||||||||||||
Sbjct: 38 atagaatgacttatattgtgaaacggagggagtata 3
Score = 83.8 bits (42), Expect = 7e-16
Identities = 118/144 (81%), Gaps = 7/144 (4%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| | ||||||||| || |||||||||||| ||||||||||||||||| |||
Sbjct: 15 gtttcacaatataagtcattctattatttcccacattcatattgatgttaatgaaactac 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| || || || || |||||||||||||| ||| |||||||| |||||| ||
Sbjct: 75 atctattta-------agtttcattaacatcaatataaatgtgggaaatactagaatgac 127
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 128 ttacattgtgaaacggaggaagta 151
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | |||||||| || || ||| |||||||| |||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | |||||| |||||||||| ||||||||| ||||||||||| | ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
||||| |||||||| ||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
|||| |||||||||||||||| | | ||||||||||||||||| ||||||||| ||||||
Sbjct: 110 atatagatgttaatgaatctagacacatatatatgtctagattcattaacatctatatga 51
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||| ||| ||||| ||||||||| ||||||||||| ||||
Sbjct: 50 atgtgggcaatactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 113 bits (57), Expect = 8e-25
Identities = 127/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 9 acttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaa 68
||||||| |||||| | ||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 6 acttcctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaa 65
Query: 69 tgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatgg 128
| |||||| ||||||||| |||||||||||||||||||||| |||||
Sbjct: 66 taaatcta-------------gtctagattcattaacatcaatatgaatatggaaaatgc 112
Query: 129 tagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 113 tagaatgacttacattgtgaaacggagggagta 145
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 92 ctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaac 151
|||||||||||||||||||||| ||| || |||||| |||||| ||||||||| ||||||
Sbjct: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 15
Query: 152 ggagg 156
|||||
Sbjct: 14 ggagg 10
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 113 bits (57), Expect = 8e-25
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 85 tatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacatt 144
|||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||||||
Sbjct: 81 tatatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacatt 22
Query: 145 gtgaaacggagggagta 161
|||||||||||| ||||
Sbjct: 21 gtgaaacggaggaagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| ||||||||||| || |||||||||||| |||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 133 ataacttacattgtgaaacggagggagtat 162
||||||||||||||||||||||||||||||
Sbjct: 79 ataacttacattgtgaaacggagggagtat 108
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 113 bits (57), Expect = 8e-25
Identities = 122/144 (84%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||| ||||||| |||||||||||||||| | ||
Sbjct: 142 gtttcacaatgtaagtcattctagccttttccacattcatattgatgttaatgagtttag 83
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||| |||||||||||| |||||||||||||| ||| ||||| |||||| ||
Sbjct: 82 atagatacatatgtctagat------acatcaatatgaatgtggaaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
Score = 87.7 bits (44), Expect = 5e-17
Identities = 127/155 (81%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt- 62
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
||||| | | || ||| | |||| | | |||||||||||||||||| ||| |||
Sbjct: 63 -----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaag 117
Query: 127 ggtagaataacttacattgtgaaacggagggagta 161
| |||||| ||||||||||||||||||||||||||
Sbjct: 118 gctagaatgacttacattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 111 bits (56), Expect = 3e-24
Identities = 77/84 (91%)
Strand = Plus / Plus
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||||||| || | ||||||||||||||||||||||| |||||| |||||| |||||| ||
Sbjct: 62 atagatagatctatctagatttattaacatcaatataaatatgagaaatgctagaatgac 121
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 122 ttacattgtgaaacggagggagta 145
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||||| ||||||||| || ||| ||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 111 bits (56), Expect = 3e-24
Identities = 130/157 (82%), Gaps = 12/157 (7%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| ||| |||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||| |||||||| |||||| |||||||||||||||||| ||| |||||
Sbjct: 86 atgtatctatat------------ctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagtatat 164
|||||| |||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtatat 2
Score = 89.7 bits (45), Expect = 1e-17
Identities = 119/146 (81%), Gaps = 12/146 (8%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||||||| ||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgtatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| ||||| |||||||||||||||||| ||||||||| |||||| ||
Sbjct: 75 ata------------tagatacattaacatcaatatgaatgtgggaaatgctagaatgac 122
Query: 138 ttacattgtgaaacggagggagtata 163
|||||||||| |||||||| ||||||
Sbjct: 123 ttacattgtggaacggaggaagtata 148
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Plus
Query: 83 tatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttaca 142
|||| |||||||||||||||||||||||||||||||||||||||| || ||| |||| ||
Sbjct: 58 tataaatgtctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgca 117
Query: 143 ttgtgaaacggagggagtat 162
|||||||||||||| |||||
Sbjct: 118 ttgtgaaacggaggaagtat 137
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 113 tgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 53 tgaatgtgggaaatactagaataacttacattgtgaaacggaggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| || |||||||| || |||||||| ||| ||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 68 atgaatcta 76
|| ||||||
Sbjct: 76 ataaatcta 68
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 119/141 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||| |||||||||| ||||||||||
Sbjct: 148 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||| |||||||||||| | | ||||||||||| || || ||| |||||| ||
Sbjct: 88 acatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgctagaatgac 29
Query: 138 ttacattgtgaaacggaggga 158
|||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggga 8
Score = 109 bits (55), Expect = 1e-23
Identities = 119/141 (84%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || || || |||||| ||||||| | ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | | ||||||||||||||| ||| |||||||||||||| || |||||| |||||| ||
Sbjct: 75 acatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgctagaatgac 134
Query: 138 ttacattgtgaaacggaggga 158
|||||||||||||||||||||
Sbjct: 135 ttacattgtgaaacggaggga 155
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| ||||||||| |||||| |||||||||||||||
Sbjct: 66 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattgtgaaa 125
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 126 cggagggagta 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 126 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatctag 67
Query: 78 atagatat 85
||||||||
Sbjct: 66 atagatat 59
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 60 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 107 bits (54), Expect = 5e-23
Identities = 123/145 (84%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| |||||| ||| | |||||||||||||||
Sbjct: 146 gtttcacaatgtaagtcattctagcatttttcacattcatactcatgttaatgaatctag 87
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| |||||||||||| ||| |||||||| | ||||||| ||||||||| ||||| ||
Sbjct: 86 ata--tatatatgtctaaattcattaacatgagtatgaatgtgggaaatgccagaatgac 29
Query: 138 ttacattgtgaaacggagggagtat 162
||| ||||||||||||||| |||||
Sbjct: 28 ttatattgtgaaacggaggaagtat 4
Score = 101 bits (51), Expect = 3e-21
Identities = 129/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| | |||||||||||| ||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || | | |||||||| ||||||| |||||||| | ||||||| || |||||
Sbjct: 65 atgaatttagacatatatatat--ctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
|||| |||||||||||||||| ||| ||| ||||||||||||| ||||||||| | ||||
Sbjct: 110 atatggatgttaatgaatctaaatacatacatatgtctagattcattaacatctaaatga 51
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||| |||| ||||| |||||||||||||||||||| ||||
Sbjct: 50 atatgggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 124/155 (80%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| |||||| | || || ||| |||| ||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | || ||| | | |||||| ||||||||| ||||| | |||| |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 128 gtagaataacttacattgtgaaacggagggagtat 162
||||| ||||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 105 bits (53), Expect = 2e-22
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 87 tatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgt 146
|||||||||||||||||||||| |||||||| ||| |||| |||||||||||||||| |
Sbjct: 63 tatgtctagatttattaacatctatatgaatgtggacaatgctagaataacttacattat 122
Query: 147 gaaacggagggagtata 163
|||||||||||||||||
Sbjct: 123 gaaacggagggagtata 139
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 113 tgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||| |||| |||||||||||||||| ||||||||||| ||||
Sbjct: 53 tgaatgtgggcaatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 105 bits (53), Expect = 2e-22
Identities = 127/154 (82%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||||||| |||||| || |||||||||||||||||| |||||||||
Sbjct: 65 atgaatctat------------gtctagtttcattaacatcaatatgaatgtgggaaatg 112
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| |||||||||||||||| |||||||||
Sbjct: 113 ctagaatgacttacattgtgaaaccgagggagta 146
Score = 85.7 bits (43), Expect = 2e-16
Identities = 117/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| ||||||||||||||||| |||
Sbjct: 136 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaaactag 77
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||||| |||||||||||||||||| ||| ||||| |||||| ||
Sbjct: 76 aca------------tagattcattaacatcaatatgaatgtggaaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 131/157 (83%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||| | |||||| | ||||| ||| |||||||| |||| |||| |
Sbjct: 4 gtacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgct 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
||| |||||||||| ||| ||||||||||| |||| |||| |||||||| |||| |||
Sbjct: 64 aataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaat 123
Query: 127 ggtagaataacttacattgtgaaacggagggagtata 163
| ||||| |||||||||||||||||||||||||||
Sbjct: 124 gttagaaagtcttacattgtgaaacggagggagtata 160
Score = 63.9 bits (32), Expect = 7e-10
Identities = 116/144 (80%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||| | || ||| ||| |||||||| |||| |||| |||||||||||
Sbjct: 148 gtttcacaatgtaagactttctaacattgcccacattcatatagatgctaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | ||||| | ||||||||||| |||| |||||||| |||| |||| || || |
Sbjct: 88 acattattatatatatagatttattagcatctatatgaatgtgggtaatgctataaagtc 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
||||||||||||| ||||||||||||||| ||||||||| |||||| |||||||||||||
Sbjct: 72 tgtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 131
Query: 149 aacggagggagta 161
|||||||| ||||
Sbjct: 132 aacggaggaagta 144
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 103 aacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtgggaaatgctagaatggcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| ||||||||| |||||| ||||| |||||||||
Sbjct: 65 tctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtgaaa 124
Query: 151 cggagggagtata 163
|||||||||||||
Sbjct: 125 cggagggagtata 137
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||
Sbjct: 125 gtttcacaatataagtcattctaacatttcccacattcatattgatgttaatgaatcta 67
Score = 71.9 bits (36), Expect = 3e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 102 taacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||| ||| ||||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 64
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 83 tatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttaca 142
|||||||||||||||| ||||| || ||||||||| ||||||||| |||||| |||||||
Sbjct: 57 tatatatgtctagattcattaatataaatatgaatgtgggaaatgctagaatgacttaca 116
Query: 143 ttgtgaaacggagggagtata 163
|||||||||||||| ||||||
Sbjct: 117 ttgtgaaacggaggaagtata 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||||| ||||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 68 atgaatcta 76
|||||||||
Sbjct: 75 atgaatcta 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 19 tttcacagtgtaagtcattataaaatttcccacatttatatt 60
||||||| ||||||||||| || |||||||||||| |||||
Sbjct: 16 tttcacaatgtaagtcattctagcatttcccacattcatatt 57
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 8e-22
Identities = 70/76 (92%)
Strand = Plus / Minus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||||| |||||| |||||||||||||||||| ||||||||| |||||| ||||||||||
Sbjct: 80 atatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacattg 21
Query: 146 tgaaacggagggagta 161
|||||||||| |||||
Sbjct: 20 tgaaacggagagagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 118/144 (81%), Gaps = 15/144 (10%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctaacatttcccacattcatattgatgttaatgaatc--- 71
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| | || |||||||| |||||||||||||||| ||||| |||||| ||
Sbjct: 72 -----taaacatatctagattcattaacatcaatatga-------aaatgctagaatgac 119
Query: 138 ttacattgtgaaacggagggagta 161
|||||||||||||||||| |||||
Sbjct: 120 ttacattgtgaaacggagagagta 143
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 8e-22
Identities = 121/144 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||| | || ||| ||| |||||||| | || ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttttaacattgcccacattcacatagatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| |||| | |||||||||| ||||||||| |||||||| || | |||| ||| | |
Sbjct: 88 atatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatgctaggaagtc 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 49 cacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatc 108
|||||| |||| |||||||||||||||| | | | |||||| |||||||| |||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatatctagattcattaacatc 105
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| ||||| |||| |||| || || |||||||||||||||||||||||||
Sbjct: 106 tatgtgaatgtgggcaatgttaaaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 103 bits (52), Expect = 8e-22
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||||| |||||| |||||||||||||||||| ||||||||| |||||| ||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtgggaaatgctagaatgacttatattg 124
Query: 146 tgaaacggagggagta 161
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
||||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||||| |
Sbjct: 67 tattaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| |||||||| | ||||||||| || |||||||||||| |||||||||
Sbjct: 143 atgtactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatg 84
Query: 65 ttaatgaatctata 78
||||||||||||||
Sbjct: 83 ttaatgaatctata 70
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 122/148 (82%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| |||||| ||||| |||||||| ||||||| ||||| |||||| ||
Sbjct: 75 atg------------tagattcattaatatcaatataaatatggaaaatgctagaatgac 122
Query: 138 ttacattgtgaaacggagggagtatata 165
||||||||||||||||||||||||||||
Sbjct: 123 ttacattgtgaaacggagggagtatata 150
Score = 87.7 bits (44), Expect = 5e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| || |||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 151 cgga 154
||||
Sbjct: 15 cgga 12
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| ||| |||||||||||||| ||||||||| |||||| |||||||||||||
Sbjct: 77 tgtctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtga 18
Query: 149 aacggagggagtata 163
|||||||| ||||||
Sbjct: 17 aacggaggaagtata 3
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 103 aacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| |||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 68 atgaatcta 76
|||||||||
Sbjct: 65 atgaatcta 73
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
|||||| | ||||||||||| || |||||||||||| |||||||||||
Sbjct: 125 gtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 77
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| |||||||||||| ||| ||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 117/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 15 gtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| ||||||| |||||||||||||||||||| | ||||| |||||| ||
Sbjct: 75 at------------ctagattcattaacatcaatatgaatatagtaaatgctagaatgac 122
Query: 138 ttacattgtgaaacggagggagta 161
||| |||||| |||||||| ||||
Sbjct: 123 ttatattgtggaacggaggaagta 146
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| |||||||||||| ||| ||||||||| |||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatggtaaaatgacttacattatgaaa 135
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 136 cggagggagta 146
Score = 85.7 bits (43), Expect = 2e-16
Identities = 117/144 (81%), Gaps = 12/144 (8%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 136 gtttcataatgtaagtcattttaccatttcccacattcatattgatgttaatgaatctag 77
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| ||||||| |||||||||||||||||||| | ||||| |||||| ||
Sbjct: 76 at------------ctagattcattaacatcaatatgaatatagtaaatgctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||| |||||| |||||||| ||||
Sbjct: 28 ttatattgtggaacggaggaagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 102 taacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 5
Query: 162 tat 164
|||
Sbjct: 4 tat 2
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 103 aacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 46.1 bits (23), Expect = 2e-04
Identities = 51/59 (86%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||| ||| || |||| ||||||| ||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacattcatattgatgtt-atgaatcta 72
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
|||||||| |||||||| ||||||||||| || |||| ||| ||| |||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 73
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| ||| ||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || |||| ||||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
|||||||| |||||| | || |||||||| ||| |||||||||||||| | |||||||
Sbjct: 134 tacttcctccgtttcataatggaagtcattctaacatttcccacatttacagtgatgtt 76
Score = 46.1 bits (23), Expect = 2e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||| |||| |||| ||||||||||| ||||
Sbjct: 92 tgggaaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||||| | ||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
||||||||||||||||||| | |||||| ||||||| ||||| ||||||||||||||| |
Sbjct: 76 tattaacatcaatatgaatgtaggaaatagtagaatgacttatattgtgaaacggaggaa 135
Query: 159 gtatata 165
|||||||
Sbjct: 136 gtatata 142
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || |||| | | ||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttctatattcatattgatgttaatgaatcta 73
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
|||||||||||||| |||||||||||||||||| ||||||||| |||||| ||||||||
Sbjct: 52 atatatgtctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacat 111
Query: 144 tgtgaaacggagggagta 161
| ||||||||||| ||||
Sbjct: 112 tatgaaacggaggaagta 129
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 68 atgaatcta 76
||| |||||
Sbjct: 69 atggatcta 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 133 ataacttacattgtgaaacggagggagtat 162
||||||||||||||||||||||||||||||
Sbjct: 33 ataacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||| ||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct: 75 tctagattcattagcatcaatatgaatgtgaaaaatgctagaataacttacattgtgaaa 16
Query: 151 cggagggagtatat 164
||||||||||||||
Sbjct: 15 cggagggagtatat 2
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||| ||| |||| ||||||||| ||| | | ||||| || ||| | |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatataaatgtagaaaatgctaaaatgatttacattgtgaaa 135
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 136 cggagggagta 146
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||| ||| || |||| |||||| ||||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcatttttcacattcatattgatgctaatgaatcta 73
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||| ||| |||||||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 75 tctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtgaaa 16
Query: 151 cggagggagtatat 164
|||||| |||||||
Sbjct: 15 cggaggaagtatat 2
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| ||| |||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 68 atgaat 73
||||||
Sbjct: 65 atgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||| |||| || ||| ||||||||| ||||||||||||||||
Sbjct: 80 catcaatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 99.6 bits (50), Expect = 1e-20
Identities = 98/113 (86%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 49 cacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatc 108
|||||| |||| ||||||||||||||||| | ||||||||||| |||| |||||||||
Sbjct: 115 cacattcatatagatgttaatgaatctatgca--tatatatgtcttgattcattaacatc 58
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
| |||||| ||||||||| || ||| ||||||||||||||||||||| ||||
Sbjct: 57 tacatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||| | | ||||||||| |||||| ||||||||| |||||||| || |||||
Sbjct: 65 atgaatc--aagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatg 122
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|| ||| |||| |||| ||||||||||||||||
Sbjct: 123 ctaaaatgacttgcattatgaaacggagggagta 156
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| |||||| | ||||| ||| || |||| || | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | || |||||||||||||||||||||||| | ||| || |||| ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
||||| |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 97 tttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagg 156
||||||||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||
Sbjct: 73 tttattaacatcaatatgaatgtgggaaatgctagaatgacttactttgtgaaacggagg 132
Query: 157 gagta 161
|||||
Sbjct: 133 gagta 137
Score = 87.7 bits (44), Expect = 5e-17
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 94 agatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgg 153
||||| |||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 72 agattcattaccatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgg 13
Query: 154 agggagta 161
||| ||||
Sbjct: 12 aggaagta 5
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| |||||||| |||||||||| || |||||||||||| |||||||||
Sbjct: 140 atgtactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatg 81
Query: 65 ttaat 69
|||||
Sbjct: 80 ttaat 76
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| ||||||||| |||||||| ||||||||| |||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 153 gagggagta 161
|||||||||
Sbjct: 13 gagggagta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| ||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||||||||||| |||| |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatatagatgttaatgaatctat 74
Query: 78 at 79
||
Sbjct: 75 at 76
Score = 44.1 bits (22), Expect = 6e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatat 59
|||||||| ||||||||||| || |||||||||||| ||||
Sbjct: 114 gtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 97.6 bits (49), Expect = 5e-20
Identities = 129/156 (82%), Gaps = 6/156 (3%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| ||||||||||| || ||||| |||||||| ||||||| |
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgct 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
||||||| || ||| ||| |||||||| |||| ||||||||| ||| ||| ||||
Sbjct: 64 aatgaatttagata------tatctctagattcattagcatcaatataaatgtggaaaat 117
Query: 127 ggtagaataacttacattgtgaaacggagggagtat 162
| || ||| ||||| |||||||||||||||||||||
Sbjct: 118 gctaaaatgacttatattgtgaaacggagggagtat 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 119/144 (82%), Gaps = 6/144 (4%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| | ||||||||| || |||| ||||||||||||||||| ||||||||| |
Sbjct: 142 gtttcacaatataagtcattttagcattttccacatttatattgatgctaatgaatc--t 85
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| ||||||| |||| ||| |||| ||||||| | ||| || |||||| || ||| ||
Sbjct: 84 agagatata----tctaaattcattagcatcaatgtaaatgtgagaaatgctaaaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||| ||||
Sbjct: 28 ttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 97.6 bits (49), Expect = 5e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 153 gagggagta 161
|||||||||
Sbjct: 122 gagggagta 130
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||| ||| ||||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 68 atgaatctat 77
||||||||||
Sbjct: 70 atgaatctat 61
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| ||||||||| | |||||||||||| |||| ||||||| ||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 68 at 69
||
Sbjct: 61 at 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
||||||||||||||||||| ||| ||||| || ||| ||||| |||||||||| |||| |
Sbjct: 63 tattaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaa 4
Query: 159 gta 161
|||
Sbjct: 3 gta 1
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||||| |||||| |||||||||||||||||| ||| ||||| |||||| ||||| ||||
Sbjct: 65 atatgtatagattcattaacatcaatatgaatgtggaaaatgctagaatgacttatattg 124
Query: 146 tgaaacggagggagta 161
||||||||||||||||
Sbjct: 125 tgaaacggagggagta 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
||||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||||| |
Sbjct: 67 tattaacattaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
||||||| ||| |||||||| | ||||||||| || |||| ||||||| |||||||||
Sbjct: 143 atgtactccctccgtttcacaatataagtcattctagcattttccacattcatattgatg 84
Query: 65 ttaatgaatctata 78
||||||||||||||
Sbjct: 83 ttaatgaatctata 70
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/144 (83%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || ||| |||||||| |||| |||| |||||||||||
Sbjct: 148 gtttcataatgtaagtcattttagcattgcccacattcatatagatggtaatgaatctaa 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | || | ||| |||||||| ||||||||| ||||| ||||||| || | |||||| ||
Sbjct: 88 acatatgtctatatctagattcattaacatctatatgcatatgggtaaggctagaatgac 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
Score = 91.7 bits (46), Expect = 3e-18
Identities = 91/106 (85%)
Strand = Plus / Plus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
|||| |||||||||||||||| ||| | | |||||| |||||| |||| |||| ||||||
Sbjct: 53 atatagatgttaatgaatctagatatagacatatgtttagattcattaccatctatatga 112
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||| |||| || ||| ||||||||| ||||||||||||||||
Sbjct: 113 atgtgggcaatgctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 90 gtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaa 149
||||||||| |||| |||||||||||||||||||||| |||||| ||||||||| ||||
Sbjct: 65 gtctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaa 124
Query: 150 acggagggagta 161
||||||||||||
Sbjct: 125 acggagggagta 136
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 61 catcaatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||| | ||||||||||| || |||||||| ||| ||||||||| |||||||||||
Sbjct: 126 gtttcataatgtaagtcattctagtatttcccatattcatattgatgctaatgaatcta 68
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 95.6 bits (48), Expect = 2e-19
Identities = 113/137 (82%), Gaps = 12/137 (8%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||||||||||| |||| ||| |||||||||||| ||||||||||||
Sbjct: 136 gtttcacaatgtaagtcattatagcattttccatatttatattgatattaatgaatctac 77
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| ||||||| |||||||||||||||||| || |||||| |||||| ||
Sbjct: 76 at------------ctagattcattaacatcaatatgaatgtgagaaatgctagaatgac 29
Query: 138 ttacattgtgaaacgga 154
|||||||||||||||||
Sbjct: 28 ttacattgtgaaacgga 12
Score = 93.7 bits (47), Expect = 8e-19
Identities = 121/148 (81%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatctag 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| |||||| ||||| |||||||| ||||||| ||||| || ||| ||
Sbjct: 75 atg------------tagattcattaatatcaatataaatatggaaaatgctataatgac 122
Query: 138 ttacattgtgaaacggagggagtatata 165
||||||||||||||||||||||||||||
Sbjct: 123 ttacattgtgaaacggagggagtatata 150
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
|||||||| ||||||||||||||||||| ||||||| |||||||| |||||| ||||||
Sbjct: 65 atatatatatctagatttattaacatcactatgaatgtgggaaatactagaatgacttac 124
Query: 142 attgtgaaacggagggagta 161
||| |||||| |||||||||
Sbjct: 125 attatgaaacagagggagta 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||| ||| ||||||| | ||||||||||| || |||||||||||| ||| |||||||
Sbjct: 145 gtactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtt 86
Query: 67 aatgaatctatatagatatat 87
||| |||||| ||| ||||||
Sbjct: 85 aataaatctagatatatatat 65
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
||||||||||| ||||||| || ||||| |||||| ||||||||| ||||||||||| |
Sbjct: 67 tattaacatcactatgaatgtgaaaaatgctagaatgacttacattatgaaacggaggaa 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 8e-19
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 76 atatagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaata 135
|||| ||| |||||||||||||| ||| |||| ||||||||| || |||||| ||||||
Sbjct: 53 atattgatgtatatgtctagattcattgacataaatatgaatgtgagaaatgctagaatg 112
Query: 136 acttacattgtgaaacggaggga 158
|||||||||||||||||||||||
Sbjct: 113 acttacattgtgaaacggaggga 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
|||||||||||||| || |||||| |||||| |||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggga 8
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || ||||| |||||| ||||| |||| ||||||||||
Sbjct: 128 gtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatgaatcta 70
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||| ||||||||||| || ||||| |||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| |||||| | || || ||| ||||||| |||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | ||| ||||||||||||| |||| |||| | |||||| |||| ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagtat 162
||||| ||||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtat 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 61 gatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatg 120
|||| ||||||||||| | | || ||| ||| |||||| |||||||| ||||| || ||
Sbjct: 105 gatgctaatgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtg 46
Query: 121 ggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||| ||||| |||||||||||||||||||| ||||
Sbjct: 45 ggcaatgctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 95 gatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgga 154
|||| |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||
Sbjct: 71 gattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 155 gggagta 161
|| ||||
Sbjct: 11 ggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 95 gatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgga 154
|||| |||||||||||||||||| || |||||| |||||| | |||||||||||||||||
Sbjct: 75 gattcattaacatcaatatgaatgtgagaaatgctagaatgaattacattgtgaaacgga 134
Query: 155 gggagta 161
|||||||
Sbjct: 135 gggagta 141
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaatc 74
|||||||
Sbjct: 65 atgaatc 71
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| | ||||||| |||||| ||||||||| |||||
Sbjct: 53 tctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaa 112
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 113 cggagggagta 123
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 115 aatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||| ||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||| | ||||||||||| || |||||| ||||| |||||||||||||||||||||
Sbjct: 113 gtttcataatgtaagtcattctagcatttcctacattcatattgatgttaatgaatcta 55
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 93.7 bits (47), Expect = 8e-19
Identities = 62/67 (92%)
Strand = Plus / Minus
Query: 95 gatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgga 154
|||| |||| ||||||||||||| ||||||||| |||||| |||||||||||||||||||
Sbjct: 71 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacgga 12
Query: 155 gggagta 161
|||||||
Sbjct: 11 gggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 95 gatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgga 154
|||| |||| ||||||||||||| ||||||||| |||||| ||||||||| |||||||||
Sbjct: 72 gattcattagcatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacgga 131
Query: 155 gggagta 161
|||||||
Sbjct: 132 gggagta 138
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatc 74
|||||||| ||||||||||| || |||||||||||| ||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatc 71
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||| ||| |||| ||||||||||||| || | | ||||||||||||||| |||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| ||||||||||||| ||| ||||| |||||||||||||||||||||||||
Sbjct: 104 tctatatgaatatgggcaatactagaaagtcttacattgtgaaacggagggagta 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||| | || || ||| |||| ||| |||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccatattcatatagatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||| |||||| ||| ||||||||| ||||||||||||| | | ||||| |
Sbjct: 88 acatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactagaaagtc 29
Query: 138 ttacattgtgaaacggagggagta 161
|||||| |||||||||||||||||
Sbjct: 28 ttacatggtgaaacggagggagta 5
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||| ||||||||| |||||||| ||| ||||||||| |||||| |||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaat 69
|||||||| ||||||||||| || ||||||||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatattgatattaat 66
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| |||||||| | ||||||||| || |||||||||||| ||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 49 cacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatc 108
|||||| |||| |||||||||||||||| | | | |||||| |||||||| |||||||||
Sbjct: 46 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 105
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
|||||||| |||| |||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 106 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtata 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||||| | | |||| | |||||||||| |||||||
Sbjct: 119 cccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaaca 60
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||||||| || | |||| || || |||||||| ||||||||||||||||
Sbjct: 59 tctatatgaatgtgaggaatgctaaaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 88 atgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtg 147
||||||||||| |||| ||||||||| ||||||||||||| || ||| ||||||||||||
Sbjct: 78 atgtctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtg 19
Query: 148 aaacggagggagtat 162
||||||||||||||
Sbjct: 18 gaacggagggagtat 4
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||| ||||||||| |||||| |||||||||||||||||||| ||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 22 cacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||| |||||||||||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 19 cacaatgtaagtcattatagcatttcccatatttatattgatgctaatgaatcta 73
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||| |||||||| |||||| |||| || |||||||||||| ||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt 75
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 93.7 bits (47), Expect = 8e-19
Identities = 98/115 (85%)
Strand = Plus / Minus
Query: 49 cacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatc 108
|||||| |||| |||||||||||||||| | | | |||||| |||||||| |||||||||
Sbjct: 117 cacattcatatagatgttaatgaatctagacacacatatatttctagattcattaacatc 58
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
|||||||| |||| |||| ||||| |||||||| ||||||||||| ||||||
Sbjct: 57 tatatgaatgtgggcaatgctagaaagtcttacattatgaaacggaggaagtata 3
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||||| | | |||| | |||||||||| |||||||
Sbjct: 44 cccacattcatatagatgttaatgaatctagaaatatatgtgtgtctagattcattaaca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||||||| || | |||| || || |||||||| ||||||||||||||||
Sbjct: 104 tctatatgaatgtgagcaatgctaaaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| ||||| |||||||||||| || |||||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattaatatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 85 acatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagtat 143
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 85 tatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacatt 144
|||||||||||||| |||| ||||||||| |||||| |||||| || ||| |||||||||
Sbjct: 81 tatatgtctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacatt 22
Query: 145 gtgaaacggagggagtat 162
|||||||||||| |||||
Sbjct: 21 gtgaaacggaggaagtat 4
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||||||||| ||| ||||| || ||| ||||| |||||||||||||||||||||
Sbjct: 83 catcaatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtat 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || ||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 68 atgaatcta 76
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
|||||| |||||||| |||||||||||||||||| ||| ||||| |||| | ||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 144 tgtgaaacggagggagta 161
|||||||||||||||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
||||||| ||||||||| | ||| |||| ||||||| |||||||||||||||||||||
Sbjct: 120 gtttcaccatgtaagtcactctaacattttccacattcatattgatgttaatgaatctag 61
Query: 78 atagatat 85
||| ||||
Sbjct: 60 atatatat 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
||||||||||| |||||| || | | |||| ||||||||||||||||||||||||
Sbjct: 56 atatgaatatgagaaatgctaaattgactttcattgtgaaacggagggagtatat 2
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||
Sbjct: 66 attaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||||| ||||| |||||| ||||||||| |||||||||| |||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggagagagta 129
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 68 atgaat 73
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||| ||| |||| |||||||||||| ||| ||| ||| ||||||||||||| |||||||
Sbjct: 44 cccatattcatatagatgttaatgaacctagatatatacatatgtctagattcattaaca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
|| |||||||| ||| ||| || || |||||||||||||||||||||||||||
Sbjct: 104 tctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagtata 160
Score = 83.8 bits (42), Expect = 7e-16
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 48 ccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacat 107
||||||| |||| |||||||||||||||| | | || ||||| ||||| || ||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 59
Query: 108 caatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
| ||||||||||||| ||| ||||| |||| ||| ||||||||||||||||
Sbjct: 58 ctatatgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 127/154 (82%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||||||| | || ||| | || |||||||||||||||||| || ||||||
Sbjct: 65 atgaatctatgt-gacata--------gtttcattaacatcaatatgaatgtgagaaatg 115
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
|||||| |||||||||||||||| |||||||||
Sbjct: 116 ctagaatgacttacattgtgaaaccgagggagta 149
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| |||||||||||||||||| ||| ||||| |||||| ||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattatgaaacg 14
Query: 153 gagggagta 161
|||| ||||
Sbjct: 13 gaggaagta 5
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| ||||| ||||||||||||||| |||||| |||||| ||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 153 gagggagta 161
|||||||||
Sbjct: 118 gagggagta 126
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| ||| ||| ||||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 57 aatataaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||| | ||||||||||| || ||||| || ||| |||||||| ||||||||||||
Sbjct: 116 gtttcataatgtaagtcattctagcatttctcatattcatattgatattaatgaatcta 58
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| |||||||||||||| | | ||| ||||| ||||||||||||||||||||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 153 gagggagta 161
|||||||||
Sbjct: 13 gagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||| ||| || |||| ||||| ||||||||||||||||||||||||
Sbjct: 15 gtttcacaatgtaagttattctagcattttccacaattatattgatgttaatgaatctat 74
Query: 78 atagatata 86
|||||||||
Sbjct: 75 atagatata 83
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 136 acttacattgtgaaacggagggagta 161
||||||||||||||||||||||||||
Sbjct: 101 acttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
||||||||||||||||||||| | | ||| ||||| |||||| |||||||||||||||||
Sbjct: 71 tagatttattaacatcaatataattgtggaaaatgctagaatgacttacattgtgaaacg 130
Query: 153 gagggagta 161
|||||||||
Sbjct: 131 gagggagta 139
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| ||||||||||| || |||| ||||| |||||||||||||||| |||||||
Sbjct: 129 gtttcacaatgtaagtcattctagcattttccacaattatattgatgttaataaatctat 70
Query: 78 atagata 84
|||||||
Sbjct: 69 atagata 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 123 aaatggtagaataacttacattgtgaaacggagggagta 161
||||| || ||| ||||||||||||||| ||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||| |||||||| ||||| |||||||||||| ||||||||| |||||| |||||||||
Sbjct: 40 atatatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacatta 99
Query: 146 tgaaacggagggagtat 162
||||||||||| |||||
Sbjct: 100 tgaaacggaggaagtat 116
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || |||||||||||| |||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 68 atgaatcta 76
|||||||||
Sbjct: 55 atgaatcta 47
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 129 tagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||| ||| |||| |||||||||||| ||| ||| ||| ||||||||||||| |||||||
Sbjct: 119 cccatattcatatagatgttaatgaacctagatatatacatatgtctagattcattaaca 60
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
|| |||||||| ||| ||| || || |||||||||||||||||||||||||||
Sbjct: 59 tctatatgaatgtggacaatcctaaaaagtcttacattgtgaaacggagggagtata 3
Score = 83.8 bits (42), Expect = 7e-16
Identities = 96/114 (84%)
Strand = Plus / Plus
Query: 48 ccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacat 107
||||||| |||| |||||||||||||||| | | || ||||| ||||| || ||||||||
Sbjct: 45 ccacattcatatagatgttaatgaatctagacatatgtatatatctaggttcattaacat 104
Query: 108 caatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
| ||||||||||||| ||| ||||| |||| ||| ||||||||||||||||
Sbjct: 105 ctatatgaatatgggcaatactagaaagtcttatattatgaaacggagggagta 158
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 89.7 bits (45), Expect = 1e-17
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 34 cattataaaatttcccacatttatattgatgttaatgaatctatatagatatatatgtct 93
|||| ||| |||||||||||| |||| | |||||||||||||| ||| ||||| ||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 94 agatttattaacatcaatatgaatatgggaaatggtagaat 134
||||| ||||||| | |||||||| ||| ||||| ||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaat 2
Score = 71.9 bits (36), Expect = 3e-12
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatt 102
|||| ||||||| |||| | |||||||||||||| | | ||||||| |||||||| |||
Sbjct: 10 attttccacattcatataggtgttaatgaatctagacatctatatatatctagattcatt 69
Query: 103 aacatcaatatgaatatgggaaatggtagaat 134
|||| | |||||||| ||||||||| ||||||
Sbjct: 70 aacacctatatgaatgtgggaaatgttagaat 101
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| |||||||||||||||||| || ||||| || ||| |||||||||||||
Sbjct: 75 tgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtga 134
Query: 149 aacggagggagta 161
|||||||||||||
Sbjct: 135 aacggagggagta 147
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||
Sbjct: 137 gtttcacaatgtaagtcattttagtatttctcacattcatattgatgttaatgaatcta 79
Score = 54.0 bits (27), Expect = 7e-07
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
||||||||||||||| ||| || |||| || ||| |||||||||||||||| ||||||
Sbjct: 67 tattaacatcaatataaatgtgacaaatactaaaatgacttacattgtgaaacagaggga 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 101 ttaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagt 160
|||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 161 a 161
|
Sbjct: 5 a 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||| ||
Sbjct: 69 attaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaag 128
Query: 160 tat 162
|||
Sbjct: 129 tat 131
Score = 63.9 bits (32), Expect = 7e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| |||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 68 atga 71
||||
Sbjct: 70 atga 67
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 4 tatgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| ||| |||||||| ||||||||||| || |||||||||||| |||| |||
Sbjct: 1 tatgtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgat 60
Query: 64 gttaa 68
|||||
Sbjct: 61 gttaa 65
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 85 tatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacatt 144
|||||||||||||| |||||||||||||||||| ||| ||||| |||||| ||||| |||
Sbjct: 63 tatatgtctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatatt 122
Query: 145 gtgaaacggagggagta 161
||||||||||| ||||
Sbjct: 123 atgaaacggaggaagta 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | | ||||||||| ||| |||| ||||||| ||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 68 atgaatcta 76
|||||||||
Sbjct: 79 atgaatcta 71
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 102 taacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| || ||| || ||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 64 taacatcaacataaatgtgaaaaatgctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 82 atcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 79.8 bits (40), Expect = 1e-14
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtaga-ataacttacattgtgaa 149
|||||||| |||||||||||||||||| ||||||||| |||| ||||||||||||||
Sbjct: 76 tctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttacattgtgaa 17
Query: 150 acggagggagta 161
||||||||||||
Sbjct: 16 acggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatat 85
|||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 41 atttcccacattcatattgatgttaatgaatctagatagatat 83
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| |||||||| ||||||||||| || |||||||| ||| ||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 82
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||| | || || ||| |||||||| |||| ||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagtattgcccacattcatatagatgttaatgaatctag 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
| | |||| |||||| ||| ||||||||| ||||||||||||| | | ||||| |
Sbjct: 88 acatatatgcgtgtctaaattcattaacatctatatgaatatgggcagtactagaaagtc 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||||||||||||||||||||
Sbjct: 28 ttacattgtgaaacggagggagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||| ||| |||| ||||||||||||| || | | ||||||||||||||| |||||||
Sbjct: 44 cccatattcatatagatgttaatgaatttagacacgcatatatgtctagattcattaaca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||||||| |||| ||| ||||| |||||||||||||||||||||||||
Sbjct: 104 tctatatgaatgtgggcaatactagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 87.7 bits (44), Expect = 5e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
||||||||||||||| |||| | ||||||||| ||||||||| |||||| ||||||||
Sbjct: 53 atatatgtctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacat 112
Query: 144 tgtgaaacggagggagtata 163
||||||||||||| ||||||
Sbjct: 113 tgtgaaacggaggaagtata 132
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| || |||||| |||||||||||||||||||||||||||| ||||
Sbjct: 56 atatgaatgtgagaaatgctagaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatatt 60
|||||||| |||||||| ||||||||||| || |||||||||||| |||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 78
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa Japonica
Group
Length = 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 102 taacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||| ||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 122 gaaatggtagaataacttacattgtgaaacggagggagtatat 164
|||||| |||||| ||||||||||||||||||||| |||||||
Sbjct: 87 gaaatgctagaatgacttacattgtgaaacggaggaagtatat 129
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 119/144 (82%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||||| |||||| | || || ||| ||| |||| |||| |||||||||||||||||
Sbjct: 148 gtttcacaatgtaagactttctagcattgcccgcattcatatagatgttaatgaatctat 89
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
||| ||||| |||||||||| |||| |||| || ||||| |||| |||| ||||| |
Sbjct: 88 atacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatgctagaaagtc 29
Query: 138 ttacattgtgaaacggagggagta 161
||||||| ||||||||||| ||||
Sbjct: 28 ttacattatgaaacggaggaagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| | || |||| ||||||||||| | | ||||| | | |||||| |||||||
Sbjct: 44 cccacattcacatagatgctaatgaatctagacacatataagtatatagattcattaaca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||||||| ||| |||| ||||| |||||||||||||||||||||||||
Sbjct: 104 tctatatgaatgcgggcaatgctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 87.7 bits (44), Expect = 5e-17
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
||||||||||||||||||||||| |||||||| |||| |||| ||||| |||||||||
Sbjct: 59 atatgtctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattg 118
Query: 146 tgaaacggagggagta 161
||||||||||| ||||
Sbjct: 119 tgaaacggaggaagta 134
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatata 165
|||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtatata 1
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
||||||||||| ||||||||| |||||| ||||| |||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 104
Score = 44.1 bits (22), Expect = 6e-04
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| | ||||||||| || |||||||||||| ||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
||||||||||||||||| ||||||||| |||||||| || | |||| |||||| ||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 142 attgtgaaacggagggagtatat 164
||| ||||| ||||| |||||||
Sbjct: 113 attatgaaatggaggaagtatat 135
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
|||||||||| || |||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 56 atatgaatataggtaatgctagaatgacttacattatgaaacggagggagtatat 2
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 27 tgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
||||||||||| || ||| | |||||| |||| ||||||||||||||||
Sbjct: 113 tgtaagtcattctagcattgcacacattcatatagatgttaatgaatcta 64
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||| ||| ||||||||| ||||||||| |||||| ||||| |||||||||
Sbjct: 62 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 121
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 122 cggagggagta 132
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| | ||||||||| || |||||||||||| ||||| ||| |||||||||||
Sbjct: 122 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatcta 64
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||| ||||||||| |||||||| ||| ||| ||||| |||||| |||||||||||||||
Sbjct: 75 tctaaatttattaatatcaatataaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||||||||| |||||| ||||| ||||||||||||||| |||||
Sbjct: 81 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagtat 137
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaat 69
|||||||| ||||||||||| || |||| |||||||||||||||| |||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacatttatattgatattaat 66
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| |||||||| | ||||||||| || |||||||||||| ||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgat 81
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
||||||||||||||||| |||| |||||||||||||| || ||||| || ||| |||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 142 attgtgaaacggagg 156
|||||||||||||||
Sbjct: 113 attgtgaaacggagg 127
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaac 151
|||||||| |||||||| |||||| ||||||||||||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaac 15
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 48 ccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacat 107
||||||| |||| |||||||||||||||| | | | ||||||||||||||| ||||||||
Sbjct: 118 ccacattcatatagatgttaatgaatctaaacacacatatatgtctagattcattaacat 59
Query: 108 caatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
| |||||||| | | |||| ||||| |||||||| ||||||||||| |||||
Sbjct: 58 ctatatgaatgtagacaatgctagaaagtcttacattatgaaacggaggaagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 50 acatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacatca 109
||||| |||| |||||||||||||||| | | |||| | ||| |||||| |||||||||
Sbjct: 47 acattcatatagatgttaatgaatctagacatatatgtgtgtttagattcattaacatct 106
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| ||| || ||||| |||||||| ||||||||||||||||
Sbjct: 107 atatgaatgtggacaaacctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||| ||| ||||||||| ||||||||| |||||| ||||| |||||||||
Sbjct: 75 tctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtgaaa 16
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 15 cggagggagta 5
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 77 atcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 133
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 77
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| | ||||||||| || |||||||||||| ||||| ||| |||||||||||
Sbjct: 15 gtttcacaatataagtcattctagcatttcccacattcatattaatgctaatgaatcta 73
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 103 aacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 88 atgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtg 147
|||| |||||| |||||||||||||||||| ||||| ||| |||||| ||||| ||||||
Sbjct: 59 atgtttagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtg 118
Query: 148 aaacggagggagta 161
||||||||| ||||
Sbjct: 119 aaacggaggaagta 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || || ||||||||| ||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 68 atgaatcta 76
|||||||||
Sbjct: 72 atgaatcta 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
|||||||| ||||||||||| || |||| ||||||| |||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcattttccacattcatattgatgtt 63
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
|||| |||||||||| |||||||||||||||||| || ||||| |||||| ||||||||
Sbjct: 82 atatttgtctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacat 23
Query: 144 tgtgaaacggagggagtat 162
| ||||||||||| |||||
Sbjct: 22 tatgaaacggaggaagtat 4
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || ||||| |||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 68 atgaatcta 76
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 61/67 (91%)
Strand = Plus / Plus
Query: 95 gatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgga 154
|||| |||||||||||||||||| ||||||||| || ||| |||||||||||||||||||
Sbjct: 68 gattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaacgga 127
Query: 155 gggagta 161
|| ||||
Sbjct: 128 ggaagta 134
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 68 atgaatc 74
|||||||
Sbjct: 74 atgaatc 68
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||| ||| ||||| | ||| ||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacggatggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 85.7 bits (43), Expect = 2e-16
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| || | |||||||||||||||| | | ||||||||||||||||| |||||||
Sbjct: 44 cccacattcatttagatgttaatgaatctaaacacatatatatgtctagattcattaaca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| || | | || || |||| ||||| |||||||||||||||||||||||||
Sbjct: 104 tctatgggtacataggcaatgttagaaagtcttacattgtgaaacggagggagta 158
Score = 65.9 bits (33), Expect = 2e-10
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 61 gatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatg 120
|||||||||||||||| | | |||||| ||| |||||| ||||||||| | |||||| ||
Sbjct: 105 gatgttaatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtg 46
Query: 121 ggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||| ||||| ||| |||| ||||||||||| ||||
Sbjct: 45 ggtaatgctagaaagtcttgcattatgaaacggaggaagta 5
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||| ||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 64 tctagattcattaacattaatatgaatatggaaaatgctagaaggacttacattgtgaaa 123
Query: 151 cggagggagta 161
|||||| ||||
Sbjct: 124 cggaggaagta 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| ||| ||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| |||||||| || || |||| ||| ||| ||||| |||||
Sbjct: 135 gtacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtt 76
Query: 67 aatgaatctatatagatatatatg 90
|||||||||| || |||||||||
Sbjct: 75 aatgaatctagatgaatatatatg 52
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| || |||||| |||||| ||||| |||||||||
Sbjct: 57 tctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaa 116
Query: 151 cggagggagta 161
|||||| ||||
Sbjct: 117 cggaggaagta 127
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| | ||||||||| || ||||| |||||| |||||||||||
Sbjct: 128 gtacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtt 69
Query: 67 aatgaatctatatag 81
|||||||||| ||||
Sbjct: 68 aatgaatctagatag 54
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 122 gaaatggtagaataacttacattgtgaaacggagggagta 161
|||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 92 ctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaac 151
||||||| |||| ||||||||||||| ||||||||| || ||| ||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 15
Query: 152 ggagggagta 161
||||| ||||
Sbjct: 14 ggaggaagta 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 68 atgaatcta 76
|||||||||
Sbjct: 65 atgaatcta 73
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtaga-ataacttacattgtgaaacggaggga 158
|||| ||||||||||||| ||||||||| || | || |||||||||||||||||||||||
Sbjct: 81 attagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggga 140
Query: 159 gta 161
|||
Sbjct: 141 gta 143
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 90/106 (84%)
Strand = Plus / Minus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
|||| |||||||||||||||| ||| ||| | ||||||||||| ||||||| | | ||||
Sbjct: 110 atatagatgttaatgaatctaaatatatacacatgtctagattcattaacaactaaatga 51
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||| |||| ||||| |||||||||||||||||||| ||||
Sbjct: 50 atgtgggtaatgctagaaagtcttacattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| |||||| | || || ||| |||||||| || | | |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | | ||||| | |||||| ||||||||| ||||| |||||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
||||| |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||||||||||| | ||||||| |||||| ||||||||||||||||||||| ||
Sbjct: 53 attaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaag 112
Query: 160 ta 161
||
Sbjct: 113 ta 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 112 atgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 54 atgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||| ||||| ||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 68 atgaat 73
||||||
Sbjct: 54 atgaat 49
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 83.8 bits (42), Expect = 7e-16
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 64 gttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatggga 123
||||||||||||| | | ||| ||||||||||||| ||||||||| | |||||||||||
Sbjct: 61 gttaatgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggc 120
Query: 124 aatggtagaataacttacattgtgaaacggagggagta 161
|||| || || |||||||||||||||||||| ||||
Sbjct: 121 aatgctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| |||||| | || || ||| |||| ||| || | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
||||||||| | | || ||| ||| |||||| |||||| || ||||| ||||| | ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
||||| |||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 83.8 bits (42), Expect = 7e-16
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 92 ctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaac 151
||||||| |||| ||||||||||||| ||||||||| || ||| ||||||||||||||||
Sbjct: 74 ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgacttacattgtgaaac 133
Query: 152 ggagggagta 161
||||| ||||
Sbjct: 134 ggaggaagta 143
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||||||||| ||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 68 atgaatcta 76
|||||||||
Sbjct: 83 atgaatcta 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtaga-ataacttacattgtgaaacggaggga 158
|||| ||||||||||||| ||||||||| || | || |||||||||||||||||||||||
Sbjct: 67 attagcatcaatatgaatgtgggaaatgctaaacatgacttacattgtgaaacggaggga 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 7e-16
Identities = 102/121 (84%), Gaps = 2/121 (1%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagata--tatatgtctagatttattaa 104
|||||||| |||| |||||||||||||||||||| ||| | | ||| |||||| |||||
Sbjct: 44 cccacattcatatagatgttaatgaatctatatatatatgtgtgtgtatagattcattaa 103
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
|||| |||||||| |||| |||| ||||| |||| | | |||||||||||||||||||
Sbjct: 104 catctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggagggagtatat 163
Query: 165 a 165
|
Sbjct: 164 a 164
Score = 65.9 bits (33), Expect = 2e-10
Identities = 99/120 (82%), Gaps = 2/120 (1%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctat--atagatatatatgtctagatttattaa 104
|||||||| |||| ||||||||||||||||| | | | |||||| | |||||| |||||
Sbjct: 121 cccacattcatatagatgttaatgaatctatacacacacatatatatatagattcattaa 62
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
|||| |||||||| |||| |||| ||||| |||| | | ||||||||||| |||||||
Sbjct: 61 catctatatgaatgtgggcaatgctagaaagtcttataatatgaaacggaggaagtatat 2
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 83.8 bits (42), Expect = 7e-16
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||| ||||||||| |||||| |||| |||||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgaaaaatactagaatgacttacattgtgaaa 16
Query: 151 cggagggagtatat 164
||||||||||||||
Sbjct: 15 cggagggagtatat 2
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||| ||| |||| ||||||||||||| | | ||||| |||||| | |||||||||||||
Sbjct: 76 tctaaattcattagcatcaatatgaatgtagaaaatgctagaatgatttacattgtgaaa 135
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 136 cggagggagta 146
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||||||||||| ||| ||||| || ||| ||||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggagggag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 102 taacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||||| ||| ||||| || ||||| ||||||||||||||||||||||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatga 71
|||||||| ||||||||||| || |||| ||||||| ||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattttagcattttccacattcatattgatgttaatga 68
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa
Japonica Group
Length = 132
Score = 83.8 bits (42), Expect = 7e-16
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 6 tgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||||| |||||||| | ||||||||| || ||||| || |||||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatga 62
Query: 66 taatgaatctatatagatatatatgt 91
||||||||||| ||||||||||||||
Sbjct: 63 taatgaatctagatagatatatatgt 88
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
|||||| | |||||||| |||| ||||||||| |||||| ||||| |||||| |||||
Sbjct: 84 atatatctatctagattcattatcatcaatataaatatgagaaatactagaatgacttat 25
Query: 142 attgtgaaacggagggagta 161
||||||||||||||| ||||
Sbjct: 24 attgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||| || ||| ||||||||| ||||||||||||||||
Sbjct: 83 atatgtgaaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 83.8 bits (42), Expect = 7e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||||||||||| ||||||||| |||||| |||| |||||||||||||||| ||
Sbjct: 66 attaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| || |||||||| || |||||||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 68 atgaa 72
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 101 ttaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagt 160
||||||||||||| |||||| |||||| || ||| |||||||||||||||||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 161 a 161
|
Sbjct: 5 a 5
Score = 73.8 bits (37), Expect = 7e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 101 ttaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagt 160
||||||||||||| |||||| |||||| || ||| ||||| ||||||||||||||| |||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 161 atata 165
|||||
Sbjct: 122 atata 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 4 tatgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||||||| ||| |||||||| ||||||||||| || ||||| || ||||||||||||
Sbjct: 1 tatgtactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgat 60
Query: 64 gttaa 68
|||||
Sbjct: 61 gttaa 65
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || ||||| || ||||||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 68 a 68
|
Sbjct: 62 a 62
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 85 tatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacatt 144
|||||||||||||| ||||||||| |||||||| |||| |||| ||||| |||||||||
Sbjct: 81 tatatgtctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacatt 22
Query: 145 gtgaaacggagggagta 161
||||||||||| ||||
Sbjct: 21 atgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||| | |||||||| || || ||| |||||||| |||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 67 aatgaatcta 76
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 137 cttacattgtgaaacggagggagtata 163
|||||||| ||||||||||||||||||
Sbjct: 98 cttacattatgaaacggagggagtata 124
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||| | ||||||||| ||||||||||||||
Sbjct: 65 tgggaaatgctagaatgatttacattgtaaaacggagggagta 107
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
|||||||| ||||||||||| || ||||||||| || |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||||||||||||| |||||||| ||| |||| ||||| ||||||||||||
Sbjct: 68 tgtctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtga 127
Query: 149 aacggagggagta 161
|||||||||||||
Sbjct: 128 aacggagggagta 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
||||| |||||||||||| |||| || || |||||||||||||||||||||||||||
Sbjct: 62 acatctatatgaatatggataatgctaaaaagtcttacattgtgaaacggagggagtata 3
Query: 164 t 164
|
Sbjct: 2 t 2
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||||| |||||||||| || |||||| |||||| ||||||||||||||||||||| ||
Sbjct: 66 attaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||||| ||||||||||| || ||||| |||||| |||||| ||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtt 63
Query: 67 aatgaatctatatagatat 85
||||||| |||||| ||||
Sbjct: 64 aatgaatatatatatatat 82
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||| ||| ||| ||||||||| |||||| ||||| ||||||||||||||||||
Sbjct: 60 attaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagggag 119
Query: 160 tatat 164
|||||
Sbjct: 120 tatat 124
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| ||||||||| || ||| ||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaa 72
|||||||| | ||||||||| || |||||||||||||||| |||||||||||||
Sbjct: 111 gtttcacaatctaagtcattctagcatttcccacatttatactgatgttaatgaa 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatatt 60
||||||||| |||||||| ||||||||||| || |||||||||||| |||||
Sbjct: 4 gtacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 62 atgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgg 121
||||||||||||||| | | ||| |||||| |||||| ||||||||| | |||||| |||
Sbjct: 104 atgttaatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgg 45
Query: 122 gaaatggtagaataacttacattgtgaaacggagggagta 161
| |||| ||||| ||||||||||||||| |||||||||
Sbjct: 44 gtaatgctagaaagtcttacattgtgaaacagagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 137 cttacattgtgaaacggagggagta 161
|||||||||||||||||||||||||
Sbjct: 136 cttacattgtgaaacggagggagta 160
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatata 165
|||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtatata 1
Score = 71.9 bits (36), Expect = 3e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 107 tgggaaatgctagaatgacttacattgtgaaacggagggagtat 150
Score = 56.0 bits (28), Expect = 2e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacgg 153
|||| ||| ||||||||| |||||| ||||||||||||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatat 59
|||||||| ||||||||||| || |||||||||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatat 59
|||||||| ||||||||||| || |||||||||||||||||
Sbjct: 96 gtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 50.1 bits (25), Expect = 1e-05
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttata 58
|||||||| ||||||||||| || ||||||||||||||||
Sbjct: 139 gtttcacaatgtaagtcattctagcatttcccacatttata 99
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa Japonica
Group
Length = 133
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
||||||||||||||||| ||||||||| | |||||| ||| |||| ||||| |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 142 attgtgaaacggagggagtatat 164
||||||||||||||| |||||||
Sbjct: 24 attgtgaaacggaggaagtatat 2
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||| | |||| |||||||||||| ||||| | ||||||||||||||||| |||| ||
Sbjct: 44 cccacaatcatatagatgttaatgaacctatacacatatatatgtctagattcattagca 103
Query: 107 tcaatatgaatatgggaaatggtagaa 133
|| |||||||| |||| |||| |||||
Sbjct: 104 tctatatgaatgtgggcaatgctagaa 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 95/116 (81%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||| ||||||||||| | | |||||| ||| ||| || |||||||
Sbjct: 119 cccacattcatatagatgctaatgaatctagacatatatatgtgtataggttcattaaca 60
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|| |||||| | |||| |||| ||||| |||| | | |||||||||||||||||
Sbjct: 59 tctatatgattgtgggcaatgctagaaagtcttataatatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 92 ctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaac 151
||||||| |||| |||||||||||| || ||||| |||||| ||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 152 ggagggagtat 162
|||||||||||
Sbjct: 122 ggagggagtat 132
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
|||||||| || |||||| |||||| ||||| |||||||||||||||||
Sbjct: 56 atatgaatttgagaaatgatagaatgacttatattgtgaaacggaggga 8
Score = 46.1 bits (23), Expect = 2e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| ||||||||||| || |||| ||| || ||||||||| |||||||||||
Sbjct: 121 gtttcacaatgtaagtcattctatcatttttcacgttcatattgatgctaatgaatcta 63
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 77.8 bits (39), Expect = 5e-14
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||| ||| ||||||| | ||||||||||| || |||| |||||| | | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||||| | | ||||| || |||||| | ||||||| |||| |||||| ||||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 128 gtagaataacttacattgtgaaacggagggagtat 162
|||||| ||||||||| |||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 117/144 (81%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgttaatgaatctat 77
|||||| | ||||||||||| || ||||| || ||| |||| ||||||| ||||||||
Sbjct: 15 gtttcataatgtaagtcattctagcatttctcatattgatatagatgttagtgaatctaa 74
Query: 78 atagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataac 137
|| |||||||||||||||| | ||||||| | ||||| || ||||| || ||| ||
Sbjct: 75 gtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatgctacaatgac 134
Query: 138 ttacattgtgaaacggagggagta 161
||||||| |||||| |||||||||
Sbjct: 135 ttacattatgaaacagagggagta 158
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 87 tatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgt 146
||||| || |||||||||||||||||||||| ||| |||| || ||| |||||||||||
Sbjct: 79 tatgtataaatttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgt 20
Query: 147 gaaacggagggagta 161
|||||||||| ||||
Sbjct: 19 gaaacggaggaagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||| ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 68 atgaatctata 78
|| ||| ||||
Sbjct: 65 ataaatttata 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 137 cttacattgtgaaacggagggagtat 162
||||||||||||||||||||||||||
Sbjct: 86 cttacattgtgaaacggagggagtat 111
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| ||||||||||||||| ||| |||||| || ||||||| |||||||
Sbjct: 20 cccacattcatatatatgttaatgaatctagatatatatatgtgcctagattcattaaca 79
Query: 107 tcaatatgaatatgggaaatggtagaa 133
|| |||||||| |||| |||| |||||
Sbjct: 80 tctatatgaatgtgggcaatgctagaa 106
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||||| | |||||||| |||||||| |||||||
Sbjct: 95 cccacattcatatagatgttaatgaatctaggcacatatatatatctagattcattaaca 36
Query: 107 tcaatatgaatatgggaaatggtagaa 133
| |||||||| |||| |||| |||||
Sbjct: 35 tatatatgaatgtgggcaatgctagaa 9
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||||| | | ||||||||||||||||| ||| |||
Sbjct: 20 cccacattcatatagatgttaatgaatctagacacatatatatgtctagattcatttaca 79
Query: 107 tcaatatgaat 117
|| ||||||||
Sbjct: 80 tctatatgaat 90
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 128/157 (81%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 7 gtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtt 66
||||||||| |||||| | |||||||| || || ||| |||||||| |||| ||||||
Sbjct: 4 gtacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtt 63
Query: 67 aatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaat 126
|||||||| || | | | ||||||||||||| ||||||||| | |||||||| | |||
Sbjct: 64 aatgaatc--tagacacacatatgtctagattcattaacatctagatgaatataagcaat 121
Query: 127 ggtagaataacttacattgtgaaacggagggagtata 163
| || || |||||||| ||||||||||||||||||
Sbjct: 122 gctacaaagtcttacattatgaaacggagggagtata 158
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 61 gatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatg 120
|||||||||||||||| | | ||| | |||||||||| ||||||||| |||||||| ||
Sbjct: 103 gatgttaatgaatctagaca--tatgtgtgtctagattcattaacatctatatgaatgtg 46
Query: 121 ggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||| ||||| ||||||||| ||||||||||| ||||
Sbjct: 45 ggcaatgctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 67 atatatatgtctagatttattagcatcaatatgaatgtgggaaatg 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||||||||||| || |||| ||||||||||||| |||||||||
Sbjct: 50 atatatatgtctagtttcattagcatcaatatgaatgtgggaaatg 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatt 102
|||||||||||| ||||||||| |||| |||| || | |||||||||||||| ||||||
Sbjct: 111 atttcccacattcatattgatgctaataaatc--tagacatatatatgtctagttttatt 54
Query: 103 a 103
|
Sbjct: 53 a 53
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 atttcccacatttatattgatgttaatgaa 72
|||||||||||| ||||||||| |||||||
Sbjct: 6 atttcccacattcatattgatgctaatgaa 35
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||| ||||||||| || ||| ||||||||| ||||||||||||||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
Score = 52.0 bits (26), Expect = 3e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| ||||||| | | ||||||||| || |||| ||||||| ||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 68 atgaatctatatag 81
||||||||| ||||
Sbjct: 65 atgaatctagatag 78
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||| | ||||||||||| || |||||||||||| ||||||||||
Sbjct: 128 gtttcataatgtaagtcattgtagcatttcccacattcatattgatgt 81
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||| |||||||||||| | ||||||| |||||| ||||||||||||||||||||| ||
Sbjct: 65 attaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaag 124
Query: 160 ta 161
||
Sbjct: 125 ta 126
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||| ||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 56 atatgaacgtgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||||| ||||| |||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 68 atgaatctatata 80
|||||| ||||||
Sbjct: 66 atgaatatatata 54
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 92 ctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaac 151
||||||| |||||||||||||||||||| || |||| ||||| |||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatataggcaatgctagaaagtcttacattatgaaac 15
Query: 152 ggagggagta 161
||||||||||
Sbjct: 14 ggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 87/106 (82%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
||||||||||||||||||||| || ||| |||||||||| |||||||| ||||||
Sbjct: 53 atattgatgttaatgaatctaggta--tatgcgtgtctagattcattaacatttatatga 110
Query: 116 atatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| ||| |||| ||||| |||||||| ||||||||||| ||||
Sbjct: 111 atgtggacaatgctagaaagtcttacattatgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacgga 154
||||||||||||||||||||||| |||||| ||||| |||||||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 5 atgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatatt 60
||||||||||| |||||||| | ||||||||| || |||||||||||| |||||
Sbjct: 122 atgtacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 75.8 bits (38), Expect = 2e-13
Identities = 68/78 (87%)
Strand = Plus / Minus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
||||| ||||||||| ||||| ||| ||||| ||||||| ||| |||||| ||||||||
Sbjct: 82 atataagtctagattcattaatatctatatgcatatgggcaatattagaatgacttacat 23
Query: 144 tgtgaaacggagggagta 161
| ||||||||||||||||
Sbjct: 22 tatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 124 aatggtagaataacttacattgtgaaacggagggagta 161
|||| |||||| ||||||||| ||||||||||| ||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagggagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
||||||||| ||| || ||||| || ||| ||||||||| |||||| ||||||||||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagggagtatat 146
Query: 165 a 165
|
Sbjct: 147 a 147
Score = 50.1 bits (25), Expect = 1e-05
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
|||| ||| ||||||| | ||||||||||| ||| |||| ||||||||||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatg 64
|||||||| ||||||||||| || ||||| |||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaa 125
||||||||||||||||||||||
Sbjct: 86 acatcaatatgaatatgggaaa 65
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 99/118 (83%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagattta-ttaac 105
|||||||| |||| |||||||||||||||| ||| || || |||||||||| | |||||
Sbjct: 120 cccacattcatatagatgttaatgaatctagatatatgtaggtgtctagattaatttaac 61
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtata 163
||| |||||||| |||| |||| ||||| |||| | | ||||||||||||||||||
Sbjct: 60 atctatatgaatgtgggtaatgctagaaagtcttataatatgaaacggagggagtata 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||| |||||||| ||||||||| |||||||| |||| |||| ||||| |||| | |
Sbjct: 84 atatatctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatc 143
Query: 146 tgaaacggagggagta 161
||||||||||||||||
Sbjct: 144 tgaaacggagggagta 159
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||||| || |||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||| |||||||| ||||||||||| || ||||| |||||| ||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 136 acttacattgtgaaacggagggagta 161
||||||||||||||||||||||||||
Sbjct: 86 acttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 75.8 bits (38), Expect = 2e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 76 atatagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaata 135
|||| ||| |||||||||||||| | ||||||| ||| |||| ||| ||||| ||||||
Sbjct: 53 atatggatgtatatgtctagattcactaacatccatacgaatgtggaaaatgttagaatg 112
Query: 136 acttacattgtgaaacggagggagta 161
||||||||| | ||||||||||||||
Sbjct: 113 acttacattataaaacggagggagta 138
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||||| || |||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 62 acatccatatgaatgtgagaaatgttagaatgacttacattatgaaacggagggagta 5
Score = 44.1 bits (22), Expect = 6e-04
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 27 tgtaagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
||||||||||| ||| |||| ||||||| ||| ||||||| ||||||||
Sbjct: 119 tgtaagtcattctaacattttccacattcgtatggatgttagtgaatcta 70
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa Japonica
Group
Length = 142
Score = 73.8 bits (37), Expect = 7e-13
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 79 tagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataact 138
||||| ||||||| |||||| ||||||||| || | || |||| |||| ||||| | ||
Sbjct: 87 tagatgtatatgtttagattcattaacatctatgtatatgtgggcaatgctagaaaatct 28
Query: 139 tacattgtgaaacggagggagtata 163
|||||||||||||||||||||||||
Sbjct: 27 tacattgtgaaacggagggagtata 3
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
||||||||| ||||| ||||||||| |||||||| |||| |||| |||||| ||||| ||
Sbjct: 82 atatatgtccagattcattaacatctatatgaatgtgggcaatgctagaatgacttatat 23
Query: 144 tgtgaaacggagg 156
| |||||||||||
Sbjct: 22 tatgaaacggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 109/133 (81%), Gaps = 2/133 (1%)
Strand = Plus / Plus
Query: 29 taagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatata 88
||||||||| || ||| |||||||| |||| ||||||||||||||| | | |||||
Sbjct: 26 taagtcattctagcattgcccacattcatatagatgttaatgaatctggaca--tatatg 83
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|| ||||||| |||| ||| ||| |||| |||| ||| |||||| ||||| |||||||
Sbjct: 84 tggctagattcattagtatctataagaatgtgggcaatcctagaatgacttatattgtga 143
Query: 149 aacggagggagta 161
|||||||||||||
Sbjct: 144 aacggagggagta 156
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||||||| |||||| || |||||| |||||||||||||||| |||||||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||||||||||| ||| || || || ||| ||||||||| ||||||||||| ||
Sbjct: 66 attaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | ||||||||||| || | || ||||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 68 atga 71
||||
Sbjct: 65 atga 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgat 63
|||| ||| ||||||||| ||||||||||| || | |||||||||| ||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 94 agatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgg 153
||||| |||| ||||||||||||| || |||||| |||||| ||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 154 agggagta 161
||| ||||
Sbjct: 128 aggaagta 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||| ||||||||||||| || |||||| |||||| |||||||| ||||||| |||||||
Sbjct: 66 attagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagagggag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||| ||| |||||||| ||||||||||| || ||||| |||||| ||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 68 atga 71
||||
Sbjct: 65 atga 68
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 94 agatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacgg 153
||||| ||||| |||||| ||||| ||||||||| |||||| ||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 154 agggagta 161
||| ||||
Sbjct: 128 aggaagta 135
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||| |||||| ||||| || |||||| |||||| ||||| ||||||||||||||||||
Sbjct: 66 attaatatcaatgtgaatgtgtgaaatgctagaatgacttatattgtgaaacggagggag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || |||||||||||| | |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 68 atgaatct 75
||||||||
Sbjct: 75 atgaatct 68
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 71.9 bits (36), Expect = 3e-12
Identities = 96/115 (83%), Gaps = 2/115 (1%)
Strand = Plus / Minus
Query: 48 ccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacat 107
|||||||||| | ||| |||||||||||| ||| || ||| | |||||||| ||||||||
Sbjct: 116 ccacatttatttagatattaatgaatctagatatatgtatgtttctagattcattaacat 57
Query: 108 caatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
| |||| || ||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 56 ctatat--atgtggacaatggtagaaagtcttacattatgaaacggagggagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 55 tatattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatg 114
||||| |||||||||||||||| | | ||| |||| |||||||| ||||| ||| | ||
Sbjct: 50 tatatagatgttaatgaatctagaaacatacatatatctagattcattaatatctaaata 109
Query: 115 aatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||| ||| |||| || || |||||||||||||||||||| ||||
Sbjct: 110 aatgtggacaatgctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 71.9 bits (36), Expect = 3e-12
Identities = 55/60 (91%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 106 atcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatata 165
|||||||||||| ||| ||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 59 atcaatatgaatgtgg-aaatgctagaatgacttatattgtgaaacggagggagtatata 1
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattga 62
|||||||| |||||||| | ||||||||| || |||||||||||| |||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| ||||||||| |||||| ||||| ||||||||||||||||||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||||||| || ||||| |||||| |||||||| |||||
Sbjct: 60 tctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacattatgaaa 119
Query: 151 cggagggagta 161
|||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||| | |||||| |||| || |||| |||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 68 atgaatctatatagatat 85
||||||||| ||||||||
Sbjct: 70 atgaatctagatagatat 53
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa Indica
Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 124 aatggtagaataacttacattgtgaaacggagggagtat 162
|||| |||||| | |||||||||||||||||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagtat 96
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 76 atatagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaata 135
||||| ||||||||||||||||| |||| |||| |||||||| |||| |||| |||||
Sbjct: 53 atatatatatatatgtctagattcattagcatctatatgaatgtgggcaatgatagaaag 112
Query: 136 acttacattgtgaaacggagggagtat 162
|||| | | |||||||||||||||||
Sbjct: 113 tcttataatatgaaacggagggagtat 139
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa Indica
Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattga 62
|||||||| ||||||||||| || ||||||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 69.9 bits (35), Expect = 1e-11
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
||||||||||||| ||| ||||||||||| | | |||| | || ||||||| |||| ||
Sbjct: 44 cccacatttatatagatactaatgaatctagacatatatgtgtgcctagattcattagca 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
| |||||||| |||| |||| ||||| |||||||| ||||||||||||||||
Sbjct: 104 tatatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 94/118 (79%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| ||| ||||||||||| | | ||||||||||||||| |||| |
Sbjct: 119 cccacattcatatatatgctaatgaatctaggcacacatatatgtctagattcattagta 60
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
|| |||| ||| |||| || | ||||| |||||||| |||||| |||| |||||||
Sbjct: 59 tctatataaatgtgggcaacgctagaaagtcttacattatgaaacagaggaagtatat 2
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||| ||| ||||||||| |||||||| |||| |||| ||||| |||||||| |||
Sbjct: 77 tgtctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatga 18
Query: 149 aacggagggagtata 163
|||||||||||||||
Sbjct: 17 aacggagggagtata 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||||| |||| |||| ||||| |||||||| ||||||||||||||||
Sbjct: 85 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 142
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 69.9 bits (35), Expect = 1e-11
Identities = 73/85 (85%), Gaps = 3/85 (3%)
Strand = Plus / Plus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatt 102
||||||||| || |||||||| |||||||||||| ||||||||| |||||||| |||
Sbjct: 6 atttcccacgttcatattgatattaatgaatctagatagatata---atctagattcatt 62
Query: 103 aacatcaatatgaatatgggaaatg 127
|| ||||||||||| |||||||||
Sbjct: 63 aatatcaatatgaacgtgggaaatg 87
Score = 61.9 bits (31), Expect = 3e-09
Identities = 72/85 (84%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatt 102
||||||||| || |||||||| |||||||||||| || ||||| | |||||||| |||
Sbjct: 86 atttcccacgttcatattgatattaatgaatctagat---tatatctatctagattcatt 30
Query: 103 aacatcaatatgaatatgggaaatg 127
|| ||||||||||| |||||||||
Sbjct: 29 aatatcaatatgaacgtgggaaatg 5
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 69.9 bits (35), Expect = 1e-11
Identities = 74/87 (85%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||||| | |||| |||| ||||||| |||||||
Sbjct: 95 cccacattcatatagatgttaatgaatctaggcatatatgtatgcctagattcattaaca 36
Query: 107 tcaatatgaatatgggaaatggtagaa 133
| ||||||||||||| |||| |||||
Sbjct: 35 tatatatgaatatgggcaatgctagaa 9
Score = 56.0 bits (28), Expect = 2e-07
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 62 atgttaatgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgg 121
||||||||||||||| | | ||||||| ||||||| ||||||||| |||||||| |||
Sbjct: 35 atgttaatgaatctaggcatacatatatgcctagattcattaacatctatatgaatgtgg 94
Query: 122 gaaatggtagaa 133
| |||| |||||
Sbjct: 95 gcaatgctagaa 106
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 111 tatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||| ||||||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 45 tatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 122 gaaatggtagaataacttacattgtgaaacggagggagta 161
|||||| |||||| |||||||||||||||| |||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacagagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatt 54
|||||||| |||||||| ||||||||||| || ||||||||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatt 49
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 67.9 bits (34), Expect = 4e-11
Identities = 72/85 (84%), Gaps = 6/85 (7%)
Strand = Plus / Minus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatt 102
|||||||||||| |||||||||| |||||||||| | |||| ||||||||| |||
Sbjct: 83 atttcccacattcatattgatgtcaatgaatctagacagat------gtctagattcatt 30
Query: 103 aacatcaatatgaatatgggaaatg 127
|||||||||||||| |||||||||
Sbjct: 29 gacatcaatatgaatgtgggaaatg 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 71/85 (83%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 43 atttcccacatttatattgatgttaatgaatctatatagatatatatgtctagatttatt 102
|||||||||||| |||||||||| |||||||||| | | | |||||||||| |||
Sbjct: 6 atttcccacattcatattgatgtcaatgaatctagaca------tctgtctagattcatt 59
Query: 103 aacatcaatatgaatatgggaaatg 127
|||||||||||||| |||||||||
Sbjct: 60 gacatcaatatgaatgtgggaaatg 84
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 30 aagtcattataaaatttcccacatttatattgatgttaatgaatctatatagatatat 87
|||||||| || |||||||||||| ||||||||||||||| ||||| ||||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatat 66
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 79 tagatatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataact 138
||||||||| | ||||||| |||||||||||||||||| ||||||||| |||||| |||
Sbjct: 63 tagatatatctatctagatacattaacatcaatatgaatgtgggaaatgctagaatgact 122
Query: 139 t 139
|
Sbjct: 123 t 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataactt 139
||||||| |||||||||||||||||| ||||||||| |||||| ||||
Sbjct: 49 tctagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 30 aagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
|||||||| || |||||||||||| ||||||||||||||| |||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatcta 47
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 67.9 bits (34), Expect = 4e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||| ||| | |||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 68 atgaatctatatagatat 85
||||||||| ||||||||
Sbjct: 70 atgaatctagatagatat 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||||||||||||| | || ||||| |||||| |||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaa 119
Query: 151 cggagggagta 161
|||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| || ||||| |||||| ||||||||||| ||||||||||||||
Sbjct: 56 atatgaatgtgagaaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| ||||| |||||||| ||||| |||||| |||||| ||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 153 gaggga 158
||||||
Sbjct: 13 gaggga 8
Score = 48.1 bits (24), Expect = 4e-05
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 102 taacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||| || ||||| || ||| ||||| ||||||||||||||| ||||
Sbjct: 78 taacatcaacatgaatgtgaaaaatgctaaaatgacttatattgtgaaacggaggaagta 137
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||| ||||| ||| || |||||| |||||| ||||||||||||||||||||| ||
Sbjct: 66 attaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || ||||| |||||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 68 atg 70
|||
Sbjct: 65 atg 67
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 124 aatggtagaataacttacattgtgaaacggagggagta 161
|||| |||||| |||||||||||| |||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacggaaggagta 101
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||||||||||||| |||||||| ||| |||| ||||| |||||||| |||||
Sbjct: 75 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 16
Query: 151 cggagggagtatat 164
|||||||||||||
Sbjct: 15 tggagggagtatat 2
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 137 cttacattgtgaaacggagggagtatat 164
|||||||| |||||||||||||||||||
Sbjct: 100 cttacattatgaaacggagggagtatat 127
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||||| || ||||||||||||||||||||||||| ||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| || ||||| || ||||||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatatt 60
|||||||| |||||||| ||||||| ||| || ||||||||||||| |||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataactta 140
||||||||||||||| |||| ||||||||||||| || |||||| |||||| |||||
Sbjct: 48 atatatgtctagattcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
Score = 50.1 bits (25), Expect = 1e-05
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacatt 144
|||| ||||||||||||| || |||||| |||||| |||||||||
Sbjct: 45 attagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 29 taagtcattataaaatttcccacatttatattgatgttaatgaatcta 76
||||||||| || ||||| |||||| ||||||||| |||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatcta 57
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||| | |||||||||||||||||||||||||
Sbjct: 119 cccacattcatatatatgttaatgaatcttggcacatatatatgtctagatttattaaca 60
Query: 107 tcaatatgaatatgggaaatg 127
| |||||||| |||| ||||
Sbjct: 59 tatatatgaatgtgggcaatg 39
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
|||||||||||||| || || ||||| |||||| ||||||||||||||||||||| ||
Sbjct: 70 attaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 129
Query: 160 tatat 164
|||||
Sbjct: 130 tatat 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||| ||| |||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 68 atgaat 73
||||||
Sbjct: 71 atgaat 66
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 123 aaatggtagaataacttacattgtgaaacggagggagta 161
||||| || ||| ||||||||||||||||||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| |||||||||||||||||| ||| |||| || ||| ||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 153 gagggagta 161
|||| ||||
Sbjct: 122 gaggaagta 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| | ||||||||| || |||| ||||||| ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 68 atgaatcta 76
|||||||||
Sbjct: 70 atgaatcta 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
|||||||||||||| ||| |||| | ||| |||||||||||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 93 tagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||||| ||||||||| |||||||| |||| |||| ||||| |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 153 gagggagta 161
|||||||||
Sbjct: 132 gagggagta 140
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctata 78
|||||||| |||| ||||||||||||||||||
Sbjct: 101 cccacattcatatagatgttaatgaatctata 70
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 87 tatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgt 146
|||||||||||| ||||||||| |||| ||||||| |||| ||||| |||||||| |
Sbjct: 63 tatgtctagattcattaacatctatataaatatggacaatgctagaaagtcttacattat 122
Query: 147 gaaacggagggagtat 162
||||||||| ||||||
Sbjct: 123 gaaacggagagagtat 138
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 114 gaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| ||||| |||||| |||| |||||||||||||||||||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 123 aaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||| ||||||||||||||||||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagggagta 116
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 63.9 bits (32), Expect = 7e-10
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| ||||||||||| || |||| ||| | ||||||||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 68 atgaatctatatagatatatatgt 91
||||||||| ||||||||| ||||
Sbjct: 70 atgaatctagatagatataaatgt 47
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| ||||||||||||||| | || ||||| || ||| |||||||||||||||
Sbjct: 60 tctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaa 119
Query: 151 cggagggagta 161
|||||| ||||
Sbjct: 120 cggaggaagta 130
Score = 48.1 bits (24), Expect = 4e-05
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 4 tatgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatat 59
|||||||| ||| |||| ||| ||||||||||| || |||||||||||||||||
Sbjct: 1 tatgtactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||| ||| |||||||| || ||| ||||||||||| ||||||||||||||
Sbjct: 56 atataaatgtgggaaatactaaaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
||||| ||||||||||| ||||||||| |||||||| ||| |||| ||||| |||||
Sbjct: 53 atatagatgtctagattcattaacatctatatgaatgtggacaatgctagaaagtcttac 112
Query: 142 attgtgaaacggagggagta 161
||| |||||| |||||||||
Sbjct: 113 attatgaaacagagggagta 132
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||||| |||||| ||||||||| ||||| || |||| |||| ||||| |||| ||||
Sbjct: 61 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 120
Query: 146 tgaaacggagggagta 161
||||||||||||||||
Sbjct: 121 tgaaacggagggagta 136
>RF00906;MIR1122;AACV01005561.1/19179-19268 39947:Oryza sativa
Japonica Group
Length = 90
Score = 63.9 bits (32), Expect = 7e-10
Identities = 69/81 (85%), Gaps = 4/81 (4%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| ||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 81 cccacattcatatatatgttaatgaatcta----gatatatatgtctagattcattaaca 26
Query: 107 tcaatatgaatatgggaaatg 127
| |||||||| |||| ||||
Sbjct: 25 tatatatgaatgtgggcaatg 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 67/81 (82%), Gaps = 4/81 (4%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| ||||||||||||| |||| |||||| |||||||| |||||||
Sbjct: 10 cccacattcatatatatgttaatgaatc----tagacatatatatctagattcattaaca 65
Query: 107 tcaatatgaatatgggaaatg 127
| |||||||| |||| ||||
Sbjct: 66 tatatatgaatgtgggcaatg 86
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 63.9 bits (32), Expect = 7e-10
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
|||||| |||||| ||||||||| ||||| || |||| |||| ||||| |||| ||||
Sbjct: 80 atatgtttagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattg 21
Query: 146 tgaaacggagggagta 161
||||||||||||||||
Sbjct: 20 tgaaacggagggagta 5
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 82 atatatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttac 141
||||||||||||||||| |||||||| |||||||| |||| |||| ||||| ||||
Sbjct: 53 atatatatgtctagattcattaacatatatatgaatgtgggtaatgctagaaagtcttat 112
Query: 142 attgtgaaacggagggagta 161
| | ||||||||||||||||
Sbjct: 113 aatttgaaacggagggagta 132
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||| |||| ||||||||||||| |||| ||||| |||| ||| |||||
Sbjct: 70 tctagattcattagcatctatatgaatatgggtaatgctagaaagtcttatattatgaaa 129
Query: 151 cggagggagta 161
|||||||||||
Sbjct: 130 cggagggagta 140
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| ||||||||| ||||||||||| | |||| ||||| ||||| ||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatatgagcaatgctagaaagacttatattatgaaa 16
Query: 151 cggagggagta 161
| |||| ||||
Sbjct: 15 cagaggaagta 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa Japonica
Group
Length = 120
Score = 61.9 bits (31), Expect = 3e-09
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 99 tattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggaggga 158
|||| |||||||||||||| || |||| || ||| |||||||||||||||||||||||
Sbjct: 67 tattgacatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggaggga 8
Query: 159 gta 161
|||
Sbjct: 7 gta 5
Score = 48.1 bits (24), Expect = 4e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 18 gtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||| |||||||||||||| |||| |||||| ||||||||||
Sbjct: 15 gtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||||| || |||| |||||| ||||||||| ||||| ||||||||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagggagta 116
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 61.9 bits (31), Expect = 3e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 86 tgggaaatgctagaatgacttacattatgaaacggagggagta 128
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 6 tgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
||||||||||| |||||| | | ||||||||| ||| ||||| ||||||||||| || |
Sbjct: 3 tgtacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaat 62
Query: 66 taatgaatcta 76
|| ||||||||
Sbjct: 63 tagtgaatcta 73
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||||| |||||| ||||| |||||| | |||||||||||||||||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagggagtat 105
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 61.9 bits (31), Expect = 3e-09
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| ||||||||||||||| | | | |||||||| |||||| ||| | |
Sbjct: 44 cccacattcatatatatgttaatgaatctagacacacatatatgtttagattcattgata 103
Query: 107 tcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|| |||||||| |||| |||| || || |||||||| |||||| |||||||||
Sbjct: 104 tctatatgaatgtgggcaatgctaaaaagtcttacattatgaaaccgagggagta 158
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Minus
Query: 84 atatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacat 143
|||| |||||||||| |||||||| ||| | |||||| ||||| || ||| ||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 144 tgtgaaacggagggagtatata 165
||||||||||| | ||||||||
Sbjct: 22 tgtgaaacggaagaagtatata 1
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
|||| ||||| |||||||||| | | ||||||||||||||||| ||| |||| ||||||
Sbjct: 110 atatagatgtcaatgaatctaaacacatatatatgtctagattcattgacatatatatga 51
Query: 116 atatgggaaatggtagaa 133
|| |||| |||| |||||
Sbjct: 50 atgtgggcaatgttagaa 33
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 120 gggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||||| || ||| ||||||||||||||||||||||||||
Sbjct: 46 gggaaatgctaaaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 123 aaatggtagaataacttacattgtgaaacggagggagtat 162
||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 70 aaatgctagaatgacttacattgtgaaacggaggaagtat 109
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 60.0 bits (30), Expect = 1e-08
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||||||||||||| || || ||||| |||||| ||||||||||||||||||||| ||
Sbjct: 65 attaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 160 ta 161
||
Sbjct: 6 ta 5
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 123 aaatggtagaataacttacattgtgaaacggaggg 157
||||| |||||| ||||||||||||||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggaggg 108
Score = 48.1 bits (24), Expect = 4e-05
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 6 tgtacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgt 65
|||||||||| |||||||| ||||||||||| || |||| ||||| ||||||||||
Sbjct: 3 tgtacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgt 61
Query: 66 taatgaat 73
||||||||
Sbjct: 62 taatgaat 69
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 119 tgggaaatggtagaataacttacattgtgaaacggagggagtatat 164
||||||||| |||||| |||||||||||| |||||||| |||||||
Sbjct: 47 tgggaaatgctagaatgacttacattgtggaacggaggaagtatat 2
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 129 tagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 62 tagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| |||||||| |||||||||||| |||| ||||| |||||||| |||
Sbjct: 77 tgtctagattcgttaacatctatatgaatatggttaatgctagaaagtcttacattatga 18
Query: 149 aacggaggga 158
||||||||||
Sbjct: 17 aacggaggga 8
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 92 ctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaac 151
||||||| ||||||||| ||||| || |||| |||| ||||| |||||||| ||||||
Sbjct: 78 ctagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacattatgaaac 137
Query: 152 ggagggagta 161
||||||||||
Sbjct: 138 ggagggagta 147
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| ||||||||| | ||||| || | |||| ||||| ||||||||||||
Sbjct: 77 tgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtcttacattgtga 18
Query: 149 aacggagggagta 161
|||||||| ||||
Sbjct: 17 aacggaggaagta 5
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 112 atgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||| || |||||| |||||| | ||||||||||||||||||||||||
Sbjct: 54 atgaatgtgagaaatgctagaatgagttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
||||||| | ||| |||| || |||||||| || |||||||||||| ||||||||| ||
Sbjct: 114 tacttccctcgttccacaatgcaagtcattttagcatttcccacattcatattgatgcta 55
Query: 68 atgaat 73
||||||
Sbjct: 54 atgaat 49
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacg 152
|||| ||||||||||||| ||||||||| || ||| |||| ||||||| ||||
Sbjct: 53 attagcatcaatatgaatgtgggaaatgctaaaatgacttgcattgtggaacg 105
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||||| ||||||| ||||| |||||| ||||| ||| ||||| |||||||||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagggagtat 140
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 129 tagaataacttacattgtgaaacggagggagtat 162
|||||| ||||||||| |||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagtat 4
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 atttatattgatgttaatgaat 73
||||||||||||||||||||||
Sbjct: 57 atttatattgatgttaatgaat 78
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 88 atgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtg 147
||||||||||| ||||||||| |||||||| |||| |||| ||||| |||| | | ||
Sbjct: 53 atgtctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatg 112
Query: 148 aaacggagggagtatata 165
||||||||| ||||||||
Sbjct: 113 aaacggaggaagtatata 130
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatcta 76
|||||||| |||| ||||||||||||||||
Sbjct: 87 cccacattcatatagatgttaatgaatcta 58
>RF00906;MIR1122;AAAA02013760.1/16919-16808 39946:Oryza sativa
Indica Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 78/93 (83%), Gaps = 6/93 (6%)
Strand = Plus / Plus
Query: 47 cccacatttatattgatgttaatgaatc----tatatagatat--atatgtctagattta 100
|||||||| |||| |||||||||||||| ||||| ||||| || |||||||||| |
Sbjct: 16 cccacattcatatggatgttaatgaatctagatatatggatattaatgtgtctagattca 75
Query: 101 ttaacatcaatatgaatatgggaaatggtagaa 133
|||||||| |||||||| |||| |||| |||||
Sbjct: 76 ttaacatccatatgaatgtgggcaatgttagaa 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatcta 76
|||||||| |||| ||||||||||||||||
Sbjct: 97 cccacattcatatggatgttaatgaatcta 68
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 129 tagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||| |||||||| ||| || |||| |||||| |||| |||||||||||||||| ||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 160 tatata 165
||||||
Sbjct: 107 tatata 112
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||||||| || |||||||| || |||| ||||||||||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 68 at 69
||
Sbjct: 48 at 47
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 109 aatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||||||| |||||||| || ||| ||||||||||||||||||||| ||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 136 acttacattgtgaaacggagggagta 161
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatatt 60
|||||||| |||||||| ||||||||||| || |||||||||||| |||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 105 catcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||| |||||||| |||| |||| ||||| |||||||||||||||||||||||||
Sbjct: 64 catctatatgaatgtgggcaatgctagaaactcttacattgtgaaacggagggagta 120
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 86 atatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattg 145
||||||||||||| ||||||||| | |||||| |||| || | || || |||||||||
Sbjct: 80 atatgtctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattg 21
Query: 146 tgaaacggagggagtat 162
||||||||||| |||||
Sbjct: 20 tgaaacggaggaagtat 4
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 111 tatgaatatgggaaatggtagaataacttacattgtgaaacggagggagtat 162
||||||| ||| |||| |||||| ||||||||||||||||||||| |||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 50.1 bits (25), Expect = 1e-05
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 85 tatatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacatt 144
|||||||||||||| ||||||| ||||| || | ||||| |||||| ||||| |||
Sbjct: 63 tatatgtctagattcattaacaattatatggatgagagaaatcctagaatgacttatatt 122
Query: 145 gtgaaacggagggagta 161
|||||||||||| ||||
Sbjct: 123 gtgaaacggaggaagta 139
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 110 atatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| ||||||| |||| |||||| ||||||||| ||||||||||| ||||
Sbjct: 56 atatgcatatgggtaatgctagaatgacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 122 gaaatggtagaataacttacattgtgaaacggagggagta 161
|||||| |||||| ||||||||||||||||||||| ||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP003023.2/81435-81277 39947:Oryza sativa Japonica
Group
Length = 159
Score = 56.0 bits (28), Expect = 2e-07
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 42 aatttcccacatttatattgatgttaatgaatctat--atagatatatatgtctagattt 99
|||| |||||||| |||| ||||||||||||||||| | | |||| | ||| ||||||
Sbjct: 39 aattgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattc 98
Query: 100 attaacatcaatatgaatatggg 122
||||||||| |||||||| ||||
Sbjct: 99 attaacatctatatgaatgtggg 121
Score = 56.0 bits (28), Expect = 2e-07
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Minus
Query: 42 aatttcccacatttatattgatgttaatgaatctat--atagatatatatgtctagattt 99
|||| |||||||| |||| ||||||||||||||||| | | |||| | ||| ||||||
Sbjct: 126 aattgcccacattcatatagatgttaatgaatctatacacacatatgtgtgtatagattc 67
Query: 100 attaacatcaatatgaatatggg 122
||||||||| |||||||| ||||
Sbjct: 66 attaacatctatatgaatgtggg 44
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 91 tctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaa 150
|||||||| |||| |||||||| |||||| ||||| || ||| | |||||||||||||
Sbjct: 36 tctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaa 95
Query: 151 cggagggagta 161
||||||||||
Sbjct: 96 tggagggagta 106
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 136 acttacattgtgaaacggagggagtat 162
||||||||||||||||||||| |||||
Sbjct: 30 acttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 54.0 bits (27), Expect = 7e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||| ||| ||||||||| |||||||| |||| |||| || || ||||||| |||
Sbjct: 70 tgtctaaattcattaacatctatatgaatgtgggcaatgctaaaaagttttacattatga 129
Query: 149 aacggagggagtata 163
|||||||||||||||
Sbjct: 130 aacggagggagtata 144
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 104 acatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
||||| |||||||| |||| |||| ||||| |||||||| ||||||||||||||||
Sbjct: 62 acatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 121 ggaaatggtagaataacttacattgtgaaacggag 155
||||||| |||||| ||||||||||||||||||||
Sbjct: 49 ggaaatgctagaatgacttacattgtgaaacggag 83
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 129 tagaataacttacattgtgaaacggagggagtat 162
|||||| ||||||||||||||||||||| |||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 47 cccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaaca 106
|||||||| |||| |||||||||||||||| | | ||| ||||||||||| |||||||
Sbjct: 95 cccacattcatatagatgttaatgaatctaggcacacatacatgtctagattcattaaca 36
Query: 107 tcaatatgaat 117
| ||||||||
Sbjct: 35 tatatatgaat 25
Score = 52.0 bits (26), Expect = 3e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 48 ccacatttatattgatgttaatgaatctatatagatatatatgtctagatttattaacat 107
||||||| |||| ||||||||||||||| | | ||| | || ||||||| ||||||||
Sbjct: 21 ccacattcatatatatgttaatgaatctagacatgtatgtgtgcctagattcattaacat 80
Query: 108 caatatgaatatgggaaatggtagaa 133
| |||||||| |||| |||| |||||
Sbjct: 81 ctatatgaatgtgggcaatgctagaa 106
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 54.0 bits (27), Expect = 7e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 103 aacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggagta 161
|||||| ||||||||||| | |||| ||||| |||||||||| ||||||||||||||
Sbjct: 50 aacatctatatgaatatgagcaatgctagaaagtcttacattgtaaaacggagggagta 108
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 52.0 bits (26), Expect = 3e-06
Identities = 122/154 (79%)
Strand = Plus / Plus
Query: 8 tacttcctttgtttcacagtgtaagtcattataaaatttcccacatttatattgatgtta 67
|||||||| |||| ||| |||||| | || ||| ||| || ||||| || | |||||||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 68 atgaatctatatagatatatatgtctagatttattaacatcaatatgaatatgggaaatg 127
|||||| || | | || || ||| |||||| ||||||||| ||||| || || | ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 128 gtagaataacttacattgtgaaacggagggagta 161
||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
Score = 44.1 bits (22), Expect = 6e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 56 atattgatgttaatgaatctatatagatatatatgtctagatttattaacatcaatatga 115
|||| |||||||||||||||| | | || ||||||||| ||| ||||||||| | ||||
Sbjct: 110 atatagatgttaatgaatctaaacacgtacatatgtctatattcattaacatctaaatga 51
Query: 116 at 117
||
Sbjct: 50 at 49
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 65/78 (83%)
Strand = Plus / Plus
Query: 87 tatgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgt 146
|||||||| ||| |||| ||| |||||||| |||| |||| ||||| ||||||||||
Sbjct: 52 tatgtctaaattcattagtatccatatgaatgtgggcaatgctagaaagtcttacattgt 111
Query: 147 gaaacggagggagtatat 164
|||||||| | |||||||
Sbjct: 112 gaaacggatgaagtatat 129
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 100 attaacatcaatatgaatatgggaaatggtagaataacttacattgtgaaacggagggag 159
||||||||| ||||| ||||| | |||| || ||| |||||||||||||||||||| ||
Sbjct: 76 attaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggaggaag 135
Query: 160 ta 161
||
Sbjct: 136 ta 137
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 89 tgtctagatttattaacatcaatatgaatatgggaaatggtagaataacttacattgtga 148
|||||||||| |||||||| |||||||| ||| |||| ||||| |||||||| |||
Sbjct: 36 tgtctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatga 95
Query: 149 aacggaggga 158
||||||||||
Sbjct: 96 aacggaggga 105
