miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00908;MIR529;AP008210.1/15896512-15896646 39947:Oryza sativa
Japonica Group
Length = 135
Score = 268 bits (135), Expect = 2e-71
Identities = 135/135 (100%)
Strand = Plus / Plus
Query: 2 tcgtgaaggctaaatggagaagagagagagtacagctttgggcggtttagttgttagatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtgaaggctaaatggagaagagagagagtacagctttgggcggtttagttgttagatg 60
Query: 62 gtggaagtacttgcgacgcctactacccttttcaccaaggctgtacgctccctcttcttc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtggaagtacttgcgacgcctactacccttttcaccaaggctgtacgctccctcttcttc 120
Query: 122 tcttagctttttatg 136
|||||||||||||||
Sbjct: 121 tcttagctttttatg 135
>RF00908;MIR529;AY946857.1/130-2 4530:Oryza sativa (rice)
Length = 129
Score = 50.1 bits (25), Expect = 8e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 98 aaggctgtacgctccctcttcttctcttagctt 130
|||||||||| ||| ||||||||||||||||||
Sbjct: 89 aaggctgtaccctctctcttcttctcttagctt 121
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 8 aggctaaatggagaagagagagagtacagc 37
|||||||| | |||||||||||||||||||
Sbjct: 5 aggctaaaggaagaagagagagagtacagc 34
