miRNEST 2.0, an integrative microRNA resource :: BLAST
>49057_osa-miR812j:pmrd
Length = 297
Score = 75.8 bits (38), Expect = 1e-14
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 19 gcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataa 78
||||||||||||||||| | ||| ||| ||| |||||||||||||||| || |
Sbjct: 240 gcagccatgagtttccgtgtccaactttaatcatccgtcttatttgaaatttttgtatga 181
Query: 79 ttagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||| |||||| ||||||| |||| ||||||||||||||||| ||||
Sbjct: 180 ttagtatttttattgttattagattataaaacatgaatagtagttta 134
Score = 44.1 bits (22), Expect = 5e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttg 218
|||||||||||| |||||||||||| | ||| ||||||||| |||||||||
Sbjct: 93 aataagacgaacaattaaagttggacaagaaaactcatggctacgcttattttg 40
Score = 44.1 bits (22), Expect = 5e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||||||| | | |||||||||||| |||||| ||||||| | |||||||| |||||
Sbjct: 197 aataagacggatgattaaagttggacacggaaactcatggctgcgtttattttgtgacgg 256
Query: 225 ag 226
||
Sbjct: 257 ag 258
>49049_osa-miR812b:pmrd
Length = 170
Score = 69.9 bits (35), Expect = 8e-13
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 50 cgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataaaa 109
|||||||||||||||||| || ||||| |||||| ||||||| |||||||||||
Sbjct: 148 cgtccgtcttatttgaaaatttttaatgattagtatttttattgttattagatgataaaa 89
Query: 110 catgaatagtacttta 125
|||||||| |||||||
Sbjct: 88 catgaatattacttta 73
>48793_obt-miR812:pmrd
Length = 175
Score = 69.9 bits (35), Expect = 8e-13
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||| ||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 119 atttttattgttattagatgataaaacatgaatagtactttatgtgtgact 69
>49054_osa-miR812g:pmrd
Length = 242
Score = 61.9 bits (31), Expect = 2e-10
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatag--tactttacttgtga 132
|||||||| |||||| |||||||||||| |||||| |||||||| ||||||||| |||
Sbjct: 158 ataattagtatttttattgttatgagataataaaatatgaatagtatactttactcatga 99
Query: 133 cttatg 138
||||||
Sbjct: 98 cttatg 93
Score = 60.0 bits (30), Expect = 8e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttattt 63
|||||||||||||| ||| ||||||||| ||| ||||||||||||||||
Sbjct: 28 taagtgcagccatggttttacgcgctcaactttaatcgtccgtcttattt 77
Score = 50.1 bits (25), Expect = 7e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacactta 213
||||||||| ||| ||||||||| |||| |||||||||||| ||||||
Sbjct: 76 aataagacggacgattaaagttgagcgcgtaaaaccatggctgcactta 28
>49048_osa-miR812a:pmrd
Length = 234
Score = 60.0 bits (30), Expect = 8e-10
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||| |||||||||||||| || |||| |||||| ||||||| | |||
Sbjct: 48 tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
Query: 104 ataaaacatgaatagtactttacttgtgact 134
||||||||||||||||| |||| |||||||
Sbjct: 108 ataaaacatgaatagtattttatgtgtgact 138
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ctccgtttcataataagtgcagcc 24
|||||||||| |||||||||||||
Sbjct: 232 ctccgtttcaaaataagtgcagcc 209
>49875_osa-miRf10660-akr:pmrd
Length = 191
Score = 54.0 bits (27), Expect = 5e-08
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| |||||| ||||| | |||||||||||||||| || |||||||
Sbjct: 62 ataattagtatttttattgttgttagatgataaaacatgattaatacttta 112
>49053_osa-miR812f:pmrd
Length = 179
Score = 54.0 bits (27), Expect = 5e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||| ||||||| |||| |||||||| |||||||||||| |||||||||||
Sbjct: 59 atttttattgttattagattataaaacacaaatagtactttatgtgtgacttatg 113
>48800_oru-miR812:pmrd
Length = 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||| ||| ||| |||||||||||||| ||||||||||||
Sbjct: 118 atttttattgctattagatgataaaacataaatagtacttta 77
>49051_osa-miR812d:pmrd
Length = 153
Score = 48.1 bits (24), Expect = 3e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 78 attagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
||||| |||||| ||||| | | ||||||||||||||||| |||||||
Sbjct: 110 attagtatttttattgttcttatatgataaaacatgaataatacttta 63
>48792_obr-miR812:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 94 ttatgagatgataaaacatgaatagtacttta 125
|||| |||||||||| ||||||||||||||||
Sbjct: 107 ttattagatgataaatcatgaatagtacttta 76
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||||| ||||||||||||||||
Sbjct: 17 tttgatcatccgtcttatttgaaa 40
>50503_osa-miRf11288-akr:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 1e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| ||||| ||||| | |||||||||||||||| || |||||||
Sbjct: 50 ataattagtattttcattgttgttagatgataaaacatgattaatacttta 100
>50479_osa-miRf11264-akr:pmrd
Length = 175
Score = 46.1 bits (23), Expect = 1e-05
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| ||||| |||||| | ||||||||||| |||| || |||||||
Sbjct: 48 ataattagtattttcgttgttgttagatgataaaaaatgattaatacttta 98
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 158 tttgaccgtccgtcttatttgaaa 135
>51125_osa-miRf11910-akr:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacat 112
|||||||| |||||| ||||| | ||||||||||||||
Sbjct: 48 ataattagtatttttattgttgttagatgataaaacat 85
>49055_osa-miR812h:pmrd
Length = 187
Score = 42.1 bits (21), Expect = 2e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacactta 213
||||||||| | | |||||||||||| || ||| ||||||||||||||
Sbjct: 118 aataagacggatgattaaagttggacacgaaaactcatggctacactta 166
>51120_osa-miRf11905-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 157 tttgaccgtccgtcttatttgaaa 134
>50829_osa-miRf11614-akr:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 158 tttgaccgtccgtcttatttgaaa 135
>50654_osa-miRf11439-akr:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 156 tttgaccgtccgtcttatttgaaa 133
>50624_osa-miRf11409-akr:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 148 tttgaccgtccgtcttatttgaaa 125
>50423_osa-miRf11208-akr:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 158 tttgaccgtccgtcttatttgaaa 135
>50253_osa-miRf11038-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 155 tttgaccgtccgtcttatttgaaa 132
>50252_osa-miRf11037-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 155 tttgaccgtccgtcttatttgaaa 132
>50251_osa-miRf11036-akr:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 159 tttgaccgtccgtcttatttgaaa 136
>49912_osa-miRf10697-akr:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatga 114
|||||||| ||||| ||||| | ||||||||||||||||
Sbjct: 48 ataattagtattttcattgttgttagatgataaaacatga 87
>49911_osa-miRf10696-akr:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 7e-04
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatga 114
|||||||| ||||| ||||| | ||||||||||||||||
Sbjct: 137 ataattagtattttcattgttgttagatgataaaacatga 98
>49729_osa-miRf10514-akr:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 7e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatga 114
|||||||| ||||| ||||| | ||||||||||||||||
Sbjct: 48 ataattagtattttcattgttgttagatgataaaacatga 87
>49052_osa-miR812e:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||| ||||||||||||||||||
Sbjct: 16 tttgaccgtccgtcttatttgaaa 39
Score = 40.1 bits (20), Expect = 7e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtactt 123
|||||| ||||||| ||||||||||| || |||| |||||
Sbjct: 54 atttttattgttattagatgataaaatataaatattactt 93
