miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01062;MIR812;AAAA02004388.1/22484-22653 39946:Oryza sativa Indica
Group
Length = 170
Score = 176 bits (89), Expect = 9e-44
Identities = 103/110 (93%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 170 gtttccgcgctcaattttgatcgtccgtcttatttgaaatttttttataattagcatttt 111
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 61
Score = 67.9 bits (34), Expect = 6e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||||||||||||||||||||||||
Sbjct: 34 aataagacgaacggttaaagttggacgcggaaaa 1
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 170 bits (86), Expect = 5e-42
Identities = 115/127 (90%)
Strand = Plus / Plus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnn 71
||||||||||||||| |||||||||||| || ||||||||||||||||||||||||
Sbjct: 19 aataagtgcagccataagtttccgcgcttaactttgatcgtccgtcttatttgaaatttt 78
Query: 72 nnnataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtg 131
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 79 tttataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtg 138
Query: 132 acttatg 138
|||||||
Sbjct: 139 acttatg 145
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 157 bits (79), Expect = 8e-38
Identities = 111/124 (89%)
Strand = Plus / Plus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnn 71
|||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 19 aataagcgcagccatgagtttctgcgcccaattttgatcgtccgtcttatttgaaatttt 78
Query: 72 nnnataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtg 131
||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||
Sbjct: 79 tttataattagcatttttattgttatgagatgataaaacataaatagtactttactcgtg 138
Query: 132 actt 135
||||
Sbjct: 139 actt 142
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| |||||
Sbjct: 173 aataagacgaacggtcaaagttgggcgcagaaaaccatggctgcacttattttgggacgg 232
Query: 225 ag 226
||
Sbjct: 233 ag 234
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||||||||||||| |||| |||| ||| ||||| ||| ||||||||||||||
Sbjct: 223 aataagtgcagccatggttttctgcgcccaactttgaccgttcgtcttatttgaaa 168
>RF01062;MIR812;AP003922.2/73692-73522 39947:Oryza sativa Japonica
Group
Length = 171
Score = 145 bits (73), Expect = 3e-34
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 171 gtttccgcgctcaactttaatcgtccgttttatttgaattttttttataattagcatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 62
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||| |||||||| ||||||||||
Sbjct: 35 aataagacgaacggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02027930.1/20244-20415 39946:Oryza sativa Indica
Group
Length = 172
Score = 135 bits (68), Expect = 3e-31
Identities = 94/105 (89%)
Strand = Plus / Minus
Query: 34 cgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttg 93
|||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||
Sbjct: 167 cgcgttcaattttgatcgtccgtcttatttaaaaattttttataattagtatttttgttg 108
Query: 94 ttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 107 ttatgagatgataaaacatgaatagtactttactcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||| |||| |||||||||||||||||||||
Sbjct: 34 aataagatgaacagttaaagttggacgcggaaaa 1
>RF01062;MIR812;AAHK01024291.1/515-686 5693:Trypanosoma cruzi
Length = 172
Score = 135 bits (68), Expect = 3e-31
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt 89
||||||||||||| |||||||||||||||||||| ||| |||||||||||||||
Sbjct: 170 tttccgcgctcaactttgatcgtccgtcttatttaaaattattttataattagcattttt 111
Query: 90 gttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||| |||| |||||||||||||||||||||||| ||||||||||
Sbjct: 110 gttgttataagataataaaacatgaatagtactttactcgtgacttatg 62
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 135 bits (68), Expect = 3e-31
Identities = 106/121 (87%)
Strand = Plus / Plus
Query: 18 tgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnata 77
|||| |||| |||||||| | |||||||||||||||||||||||||||| |||
Sbjct: 25 tgcaaccataagtttccgtacccaattttgatcgtccgtcttatttgaaatttttttata 84
Query: 78 attagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 85 attagtatttttgttgttatgagatgataaaacataaatagtactttactcgtgacttat 144
Query: 138 g 138
|
Sbjct: 145 g 145
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 135 bits (68), Expect = 3e-31
Identities = 100/113 (88%)
Strand = Plus / Plus
Query: 26 tgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcat 85
|||||||||| | |||||||||||||||||||||||||||| |||||||| ||
Sbjct: 33 tgagtttccgtgtccaattttgatcgtccgtcttatttgaaaactttttataattagtat 92
Query: 86 ttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 93 ttttgttgttatgagatgataaaacatgaatagtattttactcgtgacttatg 145
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaa 66
|||||||||| |||| || ||||| ||| |||||||||||||||||||||||
Sbjct: 221 taagtgcagctatgatttctcgcgcccaactttgatcgtccgtcttatttgaa 169
>RF01062;MIR812;AACV01025132.1/10868-10698 39947:Oryza sativa
Japonica Group
Length = 171
Score = 131 bits (66), Expect = 5e-30
Identities = 89/99 (89%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 160 caattttgatcgtccgtcttatttgaaatttttttataattagtatttttgttgttatga 101
Query: 100 gatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||| |||||||||||||| ||||||||||
Sbjct: 100 gatgataaaacataaatagtactttactcgtgacttatg 62
>RF01058;MIR806;AP008214.1/5532426-5532666 39947:Oryza sativa
Japonica Group
Length = 241
Score = 131 bits (66), Expect = 5e-30
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnn 71
|||||||||||||||||||||||| |||||| ||||||| | |||||||||| ||
Sbjct: 19 aataagtgcagccatgagtttccgtgctcaactttgatcattcgtcttattttaattttt 78
Query: 72 nnnataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtg 131
|||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||
Sbjct: 79 tttataattagcatttttgttgttatgagatgataaaacgtgagtagtactttactcctg 138
Query: 132 acttatg 138
|||||||
Sbjct: 139 acttatg 145
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||||||||||||| ||||||| ||||| ||| |||| ||| ||||||||||| |||||
Sbjct: 173 aataagacgaacggtcaaagttgaacgcgaaaacccatagctgcacttattttgggacgg 232
Query: 225 ag 226
||
Sbjct: 233 ag 234
Score = 54.0 bits (27), Expect = 9e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaa 66
|||||||||||| ||| |||| |||| |||| ||||| ||| |||||||||||||
Sbjct: 223 aataagtgcagctatgggttttcgcgttcaactttgaccgttcgtcttatttgaa 169
Score = 44.1 bits (22), Expect = 8e-04
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||||||||| | | ||||||| | |||||| ||||||| ||||||||||| |||||
Sbjct: 69 aataagacgaatgatcaaagttgagcacggaaactcatggctgcacttattttgggacgg 10
Query: 225 ag 226
||
Sbjct: 9 ag 8
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 131 bits (66), Expect = 5e-30
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnn 71
|||||||||||||||| |||||||| ||| ||||| |||||| |||||| |||
Sbjct: 19 aataagtgcagccatggttttccgcgtccaactttgactgtccgttttatttaaaatttt 78
Query: 72 nnnataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtg 131
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 79 tttataattagcatttttgttgctatgagatgataaaacatgaatagtactttacttgtg 138
Query: 132 acttatg 138
|||||||
Sbjct: 139 acttatg 145
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 181 aaagttggacgcggaaaaccatggctacacttattttgagacggag 226
|||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 53 aaagttggacgcggaaaaccatggctgcacttattttaagacggag 8
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||||||| | |||||||||||| ||||||||| |||||| |||||||||| |||||
Sbjct: 173 aataagacggatggttaaagttgggcgcggaaaaatatggctgcacttattttaggacgg 232
Query: 225 ag 226
||
Sbjct: 233 ag 234
Score = 48.1 bits (24), Expect = 5e-05
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||||||||| ||||||||| ||| ||| | | ||||||||||||||||
Sbjct: 223 aataagtgcagccatatttttccgcgcccaactttaaccatccgtcttatttgaaa 168
>RF01058;MIR806;AACV01005957.1/12052-12292 39947:Oryza sativa
Japonica Group
Length = 241
Score = 131 bits (66), Expect = 5e-30
Identities = 110/127 (86%)
Strand = Plus / Plus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnn 71
||||||| ||||| |||||||||||| ||| ||||||||| ||| ||||||||||
Sbjct: 19 aataagtacagccgtgagtttccgcgtccaactttgatcgttcgttttatttgaaatttt 78
Query: 72 nnnataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtg 131
||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||
Sbjct: 79 tttataattagcatttttgttgttataagatgataaaacatgaataatactttactcgtg 138
Query: 132 acttatg 138
|||||||
Sbjct: 139 acttatg 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||| ||||||| | ||||||||||||||||| || |||| |||||||||| |||||
Sbjct: 69 aataaaacgaacgatcaaagttggacgcggaaactcacggctgtacttattttgggacgg 10
Query: 225 ag 226
||
Sbjct: 9 ag 8
>RF01062;MIR812;AAAA02007290.1/11578-11749 39946:Oryza sativa Indica
Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 88/98 (89%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgag 100
||||||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 160 aattttgatcgtccgtcttatttgaaatttttttataattagtatttttgttgttataag 101
Query: 101 atgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||| ||||||||||
Sbjct: 100 atgataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;ABRL01002014.1/3171-3001 65489:Oryza barthii
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 28 agtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattt 87
|||||| |||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 171 agtttctgcgctcaactttgatcgtccgtcttatttgaaatttttgtataattagtattt 112
Query: 88 ttgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct: 111 ttgttgttatgagatgataaaacataaatagtactttactcgggacttat 62
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 40 caattttgatcgtccgtcttatttgaaa 67
|||||||||| |||||||||||||||||
Sbjct: 13 caattttgattgtccgtcttatttgaaa 40
>RF01062;MIR812;AP008209.1/13645053-13644882 39947:Oryza sativa
Japonica Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgctcaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 112 tattgttatgagatgataaaacatgtatagtactttacttgtgatttatg 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 caattttgatcgtccgtcttattt 63
||||||||||||||||||||||||
Sbjct: 12 caattttgatcgtccgtcttattt 35
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||| || || ||||||||| |||||||||||||| ||||||||||||||
Sbjct: 174 gtttccgcacttaactttgatcgttcgtcttatttgaaatttttttataattagcatttt 115
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 114 tattgttatgagatgataaaacatgaatagtactttactcgtgacttatg 65
>RF01062;MIR812;AY946442.1/200-29 4530:Oryza sativa (rice)
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||| || ||||||||||||||||| ||| ||||||| ||||||
Sbjct: 172 gtttccgcgcccaacttcgatcgtccgtcttatttaaaaaaaatttataattaacatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 112 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||| |||||||| || |||||||
Sbjct: 35 aataagacgaacggtcaaagttgggcgtggaaaac 1
>RF01062;MIR812;AC133339.3/154381-154211 39947:Oryza sativa Japonica
Group
Length = 171
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||| ||||||| ||||||||||| |||||||||||| |||||||| | |||
Sbjct: 171 gtttccacgctcaactttgatcgtccatcttatttgaaaattttttataattagtacttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 111 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AACV01009794.1/11451-11280 39947:Oryza sativa
Japonica Group
Length = 172
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||||||||||| ||||| || ||||||||||| ||||||||||||||
Sbjct: 172 gtttccgcgctcaattttaatcgttcgacttatttgaaatttttttataattagcatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| |||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 112 tattgttacgagatgataaaacatgaatagtactttatttgtgacttatg 63
>RF01062;MIR812;AY946491.1/27-199 4530:Oryza sativa (rice)
Length = 173
Score = 129 bits (65), Expect = 2e-29
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gttttcgcgctcaactttgatcgtccgtcttatttgaaatttttttataattagcatttt 114
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||| ||| ||||||||||||||||||| |||| ||||||||||
Sbjct: 113 tgttgttatgggataataaaacatgaatagtactctactcgtgacttatg 64
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||||| |||||||| ||| |||||
Sbjct: 35 aataagacgaacggtcaaagttgggcgcagaaaa 2
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 129 bits (65), Expect = 2e-29
Identities = 119/138 (86%), Gaps = 1/138 (0%)
Strand = Plus / Plus
Query: 1 ctccgtttcataataagtgcagccatgagtttccgcgctcaattttgatcgtccgtctta 60
|||||| ||| ||||||||||||||| ||||| ||||| ||| ||||||| || ||||||
Sbjct: 8 ctccgtctcaaaataagtgcagccat-agttttcgcgcccaactttgatcatctgtctta 66
Query: 61 tttgaaannnnnnnataattagcatttttgttgttatgagatgataaaacatgaatagta 120
||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 67 tttgaaattttttcataattagcatttttgttgttatgaaatgataaaatatgaatagta 126
Query: 121 ctttacttgtgacttatg 138
||||||| |||||||||
Sbjct: 127 ctttactcatgacttatg 144
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttg 218
||||||| |||||||||||||||| |||| ||||| |||||| |||||||||||
Sbjct: 172 aataagatgaacggttaaagttgggcgcgaaaaactatggctgcacttattttg 225
Score = 52.0 bits (26), Expect = 3e-06
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 181 aaagttggacgcggaaaaccatggctacacttattttgagacggag 226
|||||||| |||| ||||| |||||| |||||||||||||||||||
Sbjct: 52 aaagttgggcgcg-aaaactatggctgcacttattttgagacggag 8
>RF01062;MIR812;AP008208.1/25944725-25944560 39947:Oryza sativa
Japonica Group
Length = 166
Score = 127 bits (64), Expect = 7e-29
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 35 gcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgt 94
|||| |||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 164 gcgcccaattttgatcgtccgtcttatttgaaatttttttataattagcatttttattgt 105
Query: 95 tatgagatgataaaacatgaatagtactttacttgtgactt 135
|||||||||||||||||| |||||||||||||| |||||||
Sbjct: 104 tatgagatgataaaacataaatagtactttactcgtgactt 64
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 127 bits (64), Expect = 7e-29
Identities = 108/125 (86%)
Strand = Plus / Plus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnn 73
|||||| | ||| ||||||||||| ||| |||||||||||||||||||||||
Sbjct: 21 taagtgtaaccacgagtttccgcgtccaactttgatcgtccgtcttatttgaattttttt 80
Query: 74 nataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgac 133
|||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 81 tataattagtattttttttgttatgagatgataaaacatgaatagtactttactcgtgac 140
Query: 134 ttatg 138
|||||
Sbjct: 141 ttatg 145
Score = 67.9 bits (34), Expect = 6e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||
Sbjct: 221 taagtgcagccatggttttccgcgcccaactttgatcgtccatcttatttgaaa 168
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 181 aaagttggacgcggaaaaccatggctacactta 213
|||||||| ||||||||||||||||| ||||||
Sbjct: 189 aaagttgggcgcggaaaaccatggctgcactta 221
>RF01062;MIR812;AAAA02007013.1/4435-4263 39946:Oryza sativa Indica
Group
Length = 173
Score = 125 bits (63), Expect = 3e-28
Identities = 95/108 (87%)
Strand = Plus / Minus
Query: 28 agtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattt 87
|||||| |||| ||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 173 agtttctgcgcccaattttgatcatccgtcttatttgaaatttttttataattagcattt 114
Query: 88 ttgttgttatgagatgataaaacatgaatagtactttacttgtgactt 135
|| |||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 113 ttattgttatgagatgataaaacataaatagtactttactcgtgactt 66
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||| |||||||| ||| ||||||
Sbjct: 35 aataagacgaacggtcaaagttgggcgcagaaaac 1
>RF01062;MIR812;AP003835.4/38107-38280 39947:Oryza sativa Japonica
Group
Length = 174
Score = 125 bits (63), Expect = 3e-28
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 35 gcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgt 94
|||||||| |||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 167 gcgctcaactttgatcgtccgtcttatttgaaaaaattttataattaatatttttgttgt 108
Query: 95 tatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 107 tatgagatgataaaacatgaatagtactctactcgtgacttatg 64
>RF01062;MIR812;AACV01020594.1/1986-2157 39947:Oryza sativa Japonica
Group
Length = 172
Score = 123 bits (62), Expect = 1e-27
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 156 tttgatcgtccgtcttatttaaattttttttataattagcatttttgttgttatgagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||||| ||||||||||
Sbjct: 96 ataaaacatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 1e-27
Identities = 85/95 (89%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 156 tttgatcgtccgttttatttgaaaaaattatataattagtatttttgttgttatgagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||| ||||||||||||||||||||||||||||
Sbjct: 96 ataaaatatgaatagtactttacttgtgacttatg 62
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 123 bits (62), Expect = 1e-27
Identities = 107/123 (86%), Gaps = 1/123 (0%)
Strand = Plus / Plus
Query: 15 aagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnn 74
||||||| |||| ||||||||||| ||||||| ||||| |||||||||| |||
Sbjct: 22 aagtgcaaccataagtttccgcgcccaattttaatcgttcgtcttattt-aaattttttt 80
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 81 ataattagtatttttattgttatgagatgataaaacatgaatagtactttactcgtgact 140
Query: 135 tat 137
|||
Sbjct: 141 tat 143
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttat 214
||||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct: 172 aataagacggacggttaaagttggacgcggaaaactatggctgcacttat 221
>RF01062;MIR812;AACV01023121.1/33022-33182 39947:Oryza sativa
Japonica Group
Length = 161
Score = 121 bits (61), Expect = 4e-27
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||| |||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 161 gttttcgcgcccaattttgatcgtccgtcttatttgaaaattttttataattagtatttt 102
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||| | |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 101 tgttgttacgtgatgataaaacatgaatagtgctttactcgtgacttatg 52
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 121 bits (61), Expect = 4e-27
Identities = 117/138 (84%)
Strand = Plus / Plus
Query: 1 ctccgtttcataataagtgcagccatgagtttccgcgctcaattttgatcgtccgtctta 60
|||||| ||| ||||||||||||||||| ||| | ||| ||| |||||||||||||||||
Sbjct: 8 ctccgtctcaaaataagtgcagccatgaattttcacgcacaactttgatcgtccgtctta 67
Query: 61 tttgaaannnnnnnataattagcatttttgttgttatgagatgataaaacatgaatagta 120
||||||| ||||||| |||||| |||||||| ||||||||||| ||||| | ||
Sbjct: 68 tttgaaatttttttataattatcattttggttgttataagatgataaaatatgaacaata 127
Query: 121 ctttacttgtgacttatg 138
||||||| ||||||||||
Sbjct: 128 ctttactcgtgacttatg 145
Score = 67.9 bits (34), Expect = 6e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttgagacgg 224
||||||||||| | | |||||||||||||||||| |||| || ||||||||||| |||||
Sbjct: 173 aataagacgaatgatcaaagttggacgcggaaaatcatgactgcacttattttgggacgg 232
Query: 225 ag 226
||
Sbjct: 233 ag 234
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||||| ||||| |||||||| ||| ||||||| | ||||||||||||||
Sbjct: 223 aataagtgcagtcatgattttccgcgtccaactttgatcattcgtcttatttgaaa 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 200 catggctacacttattttgagacggag 226
||||||| |||||||||||||||||||
Sbjct: 34 catggctgcacttattttgagacggag 8
>RF01062;MIR812;AACV01007528.1/40580-40750 39947:Oryza sativa
Japonica Group
Length = 171
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataattagcatttttgttgctatgagatgataaaacatgaatagtactttacttgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||| | |||||||||||| |||||||||
Sbjct: 34 aataagacggatggttaaagttgggcgcggaaaa 1
>RF01062;MIR812;AACV01010271.1/7593-7765 39947:Oryza sativa Japonica
Group
Length = 173
Score = 115 bits (58), Expect = 3e-25
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||| ||| ||||||||||||||| |||||||||||||
Sbjct: 158 tttgatcgtccgtcttatttaaaatttttttataattagcatttttattgttatgagatg 99
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| |||||||||||||||||||
Sbjct: 98 ataaaacatgaataagactttacttgtgacttatg 64
Score = 63.9 bits (32), Expect = 9e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaacc 200
||||||||||||||||||||||||||| ||||||||
Sbjct: 36 aataagacgaacggttaaagttggacgtggaaaacc 1
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 3e-25
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||| ||| |||||||| |||||| |||||||||||||
Sbjct: 147 tttgatcgtccgtcttatttaaaatttttttataattagtatttttattgttatgagatg 88
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||||| ||||||||||
Sbjct: 87 ataaaacatgaatagtactttactcgtgacttatg 53
>RF01062;MIR812;AP003374.3/116876-116710 39947:Oryza sativa Japonica
Group
Length = 167
Score = 115 bits (58), Expect = 3e-25
Identities = 81/91 (89%)
Strand = Plus / Minus
Query: 48 atcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataa 107
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 148 atcgtctgtcttatttgaaatttttttataattagcatttttgttgttatgagatgataa 89
Query: 108 aacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||| |||||||||
Sbjct: 88 aacatgaatagtactttactcttgacttatg 58
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||| ||||||| ||| ||||||||||
Sbjct: 34 aataagacgaatggttaaaattgaacgcggaaaa 1
>RF01062;MIR812;AAAA02020504.1/6865-7035 39946:Oryza sativa Indica
Group
Length = 171
Score = 115 bits (58), Expect = 3e-25
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 156 tttgatcgtccgccttatttgaaatttttttataattagtatttttgttgttatgagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| || |||||||||||||||||
Sbjct: 96 ataaaacatgaataatattttacttgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 36/38 (94%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||| ||| ||||||||||||||||||||||||
Sbjct: 3 tttccgcgc-caactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02011153.1/42310-42482 39946:Oryza sativa Indica
Group
Length = 173
Score = 113 bits (57), Expect = 1e-24
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 37 gctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgtta 96
|||||| |||||||||||||||||||||||| |||||||| |||||| ||||||
Sbjct: 164 gctcaactttgatcgtccgtcttatttgaaaaatttttataattagtatttttcttgtta 105
Query: 97 tgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 104 cgagatgataaaacatgaatagtattttactcgtgacttatg 63
>RF01062;MIR812;AAAA02013232.1/6308-6477 39946:Oryza sativa Indica
Group
Length = 170
Score = 113 bits (57), Expect = 1e-24
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgag 100
||||||||||||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct: 158 aattttgatcgtccgtcttatttaaaaaataataataattagtatttttgttgttatgag 99
Query: 101 atgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||| ||||||| |||||| ||||||||||
Sbjct: 98 atgataaaacataaatagtattttactcgtgacttatg 61
>RF01062;MIR812;AP008208.1/22478382-22478209 39947:Oryza sativa
Japonica Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 174 gtttccacgctcaactttgatcgtccgtcttatttaaaatttttttataattagcatttt 115
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| |||||| || ||||||| |||||| ||||||||||
Sbjct: 114 tgttgttatgagataataaaatataaatagtattttactcgtgacttatg 65
>RF01062;MIR812;AP008212.1/25992082-25992255 39947:Oryza sativa
Japonica Group
Length = 174
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||| |||||||||| ||||||||||||| ||||||| || |||
Sbjct: 174 gtttccgcgcccaactttgatcgtctgtcttatttgaaatttttttataattaacaattt 115
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 114 tgttgttataagatgataaaatatgaatagtactttactcgtgacttatg 65
>RF01062;MIR812;AC136148.2/41090-41260 39947:Oryza sativa Japonica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct: 171 gtttccgcgtccaactttgatcgtctgtcttatttgaaatgtttttataattagcatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||| ||||||||||||| ||||||||| |||||||||||||| |||||
Sbjct: 111 tgttgctatgagatgataacacatgaataatactttacttgtgagttatg 62
>RF01062;MIR812;AP005284.3/81040-80870 39947:Oryza sativa Japonica
Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 86/98 (87%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgag 100
|||||||||||||||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 159 aattttgatcgtccgttttatttgaaatttttttataattagtatttttgttgttatgag 100
Query: 101 atgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||| |||| |||||| ||||||||||
Sbjct: 99 atgataaaacatgaacagtaatttactcgtgacttatg 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
|||||||||||| |||||| ||| ||||||||||
Sbjct: 34 aataagacgaacagttaaaattgaacgcggaaaa 1
>RF01062;MIR812;CR855047.1/68417-68246 4530:Oryza sativa (rice)
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||| |||||||||||||| || |||||||||| ||||||||||||||
Sbjct: 172 gttttcgcgcccaattttgatcgtctgttttatttgaaaattttttataattagcatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||| |||| ||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 112 tgttattataagatgataaaacatgaataatactttactcgtgacttatg 63
>RF01062;MIR812;AC132483.2/71128-71287 39947:Oryza sativa Japonica
Group
Length = 160
Score = 113 bits (57), Expect = 1e-24
Identities = 89/102 (87%)
Strand = Plus / Minus
Query: 37 gctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgtta 96
||||||||||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct: 152 gctcaattttgattgtccgtcttatttgaattttttttataattagtatttttgttgtta 93
Query: 97 tgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||||| |||||| |||||||||
Sbjct: 92 tgagatgataaaacatgaatagtattttactcatgacttatg 51
>RF01062;MIR812;AP008213.1/4933213-4933383 39947:Oryza sativa
Japonica Group
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||||||| ||||||| |||||||||||| ||| |||||||||| |||
Sbjct: 171 gttttcgcgctcaactttgatcatccgtcttatttaaaatttttttataattagcaattt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||| |||| |||||||||||||||||||||||| ||||||||||
Sbjct: 111 tgttgttataagataataaaacatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02004016.1/1508-1676 39946:Oryza sativa Indica
Group
Length = 169
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct: 169 gtttccgcgcccaactttgatcgtctgtcttatttgaaatttttttataattagcatttt 110
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||| ||| |||||||||||||||||||||| |||||| ||||||||||
Sbjct: 109 tcttgatataagatgataaaacatgaatagtattttactcgtgacttatg 60
>RF01062;MIR812;CR855240.1/66188-66017 4530:Oryza sativa (rice)
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||||| ||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 172 gtttccgcgtccaaatttgatcgtccgtcttatttgaaatttttttataattagcatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| |||| ||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 112 tattgtcatgagatgataaagcatgaataagactttacttgtgacttatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacg 191
||||||||||||||||||| |||||||
Sbjct: 35 aataagacgaacggttaaaattggacg 9
>RF01062;MIR812;AAAA02017193.1/13592-13421 39946:Oryza sativa Indica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 92/106 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 172 gtttccgcgcccaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||| ||||||||||||||||| | ||||||||| ||||||
Sbjct: 112 tgttgttataagatgataaaacatgaaaattactttactcgtgact 67
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 34 cgcgctcaattttgatcgtccgtcttatttgaaa 67
||||| ||||||||||| | ||||||||||||||
Sbjct: 7 cgcgcccaattttgatcattcgtcttatttgaaa 40
>RF01062;MIR812;AAAA02005193.1/10952-10781 39946:Oryza sativa Indica
Group
Length = 172
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||| ||||| ||||||| |||||||||||| ||| ||||||||||||||
Sbjct: 172 gtttccgctctcaactttgatcatccgtcttatttaaaatttttttataattagcatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||| |||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 112 tattgctatgagatgataaaacatgaatagtactttgctcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||||| ||||||||||||| ||||||||||||||
Sbjct: 2 tttccgcgtccaattttgatcgttcgtcttatttgaaa 39
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||| | ||| ||||||||||||||
Sbjct: 34 aataagacgaacgatcaaaattggacgcggaaaa 1
>RF01062;MIR812;AY946444.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 113 bits (57), Expect = 1e-24
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||
Sbjct: 171 gtttccgcgtccaactttgatcgttcgtcttatttgaaatttttttataattagcatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||| |||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 111 tgttattataagatgataaaatatgaatagtactttactcgtgacttatg 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaa 197
||||||||||||| | |||||||||||||||||
Sbjct: 138 aataagacgaacgatcaaagttggacgcggaaa 170
>RF01062;MIR812;AAAA02022381.1/2540-2699 39946:Oryza sativa Indica
Group
Length = 160
Score = 111 bits (56), Expect = 4e-24
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgag 100
|||||||||||||||| |||||| ||| | |||||| |||||||||||||||||
Sbjct: 148 aattttgatcgtccgttttatttaaaatatttttacaattagtatttttgttgttatgag 89
Query: 101 atgataaaacatgaatagtactttacttgtgacttat 137
||||||||||||||||||||||||||| |||||||||
Sbjct: 88 atgataaaacatgaatagtactttactcgtgacttat 52
>RF01062;MIR812;AAAA02004189.1/13863-13695 39946:Oryza sativa Indica
Group
Length = 169
Score = 111 bits (56), Expect = 4e-24
Identities = 95/109 (87%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||||| ||| ||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 169 gtttccgcgtccaactttaatcgtccgtcttattt-aaaattttttataattagcatttt 111
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 110 tgttgttataagatgataaaacatgaatagtactttactcgtgacttat 62
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaa 197
||||||||| ||| |||||||||||||||||||
Sbjct: 136 aataagacggacgattaaagttggacgcggaaa 168
>RF01062;MIR812;AAAA02017731.1/13732-13902 39946:Oryza sativa Indica
Group
Length = 171
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 126 ataattagcatttttgttgttatgagatgataaaacatgaatggtactttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttgg 188
||||||||||||||||||||||||
Sbjct: 34 aataagacgaacggttaaagttgg 11
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 113 ataattagtatttttgttgttatgagatgataaaacatgaatagtactttactcgtgact 54
Query: 135 tatg 138
||||
Sbjct: 53 tatg 50
>RF01062;MIR812;AAAA02043709.1/2181-2021 39946:Oryza sativa Indica
Group
Length = 161
Score = 111 bits (56), Expect = 4e-24
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 35 gcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt-gttg 93
|||| |||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 155 gcgcccaattttgatcgtccgtcttatttgaaatttttttataattagtattttttgttg 96
Query: 94 ttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||| |||||||||||||||||||| ||||||| ||||||||||
Sbjct: 95 ttatgtgatgataaaacatgaatagtgctttactcgtgacttatg 51
>RF01062;MIR812;AP008207.1/14327956-14328125 39947:Oryza sativa
Japonica Group
Length = 170
Score = 111 bits (56), Expect = 4e-24
Identities = 94/109 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| || ||||||| |||||||||||| ||| | ||||| ||||||
Sbjct: 170 gtttccgcgcctaactttgatcatccgtcttatttaaaatttttttagaattaacatttt 111
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 110 tgttgttatgagatgataaaacatgaatagtactttactcgtgacttat 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||||| ||||||| | ||||||||
Sbjct: 34 aataagacgaacggtcaaagttgaatgcggaaaa 1
>RF01062;MIR812;AACV01017339.1/8113-8283 39947:Oryza sativa Japonica
Group
Length = 171
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 125 ataattagcatttttgttgttatgagatgataaagcatgaatagtactttactcgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
>RF01062;MIR812;AP008210.1/28196407-28196576 39947:Oryza sativa
Japonica Group
Length = 170
Score = 111 bits (56), Expect = 4e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 123 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttaatcgtgact 64
Query: 135 tatg 138
||||
Sbjct: 63 tatg 60
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
|||||||||||||||||||||||||||| |||||
Sbjct: 34 aataagacgaacggttaaagttggacgcagaaaa 1
>RF01062;MIR812;AAAA02007969.1/1558-1388 39946:Oryza sativa Indica
Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 76 taattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactt 135
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 125 taattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtgactt 66
Query: 136 atg 138
|||
Sbjct: 65 atg 63
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
|||||||||||||||||||||| | ||||||||||
Sbjct: 35 aataagacgaacggttaaagttaggcgcggaaaac 1
>RF01062;MIR812;AAAA02035447.1/2861-2704 39946:Oryza sativa Indica
Group
Length = 158
Score = 109 bits (55), Expect = 2e-23
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 145 tttgatcgtccgtcttatttgtaaattttttataattagtatttttgttgttatgagatg 86
Query: 104 ataaaacatgaatagtactttacttgtgactt 135
||||||||||||||||| |||||| |||||||
Sbjct: 85 ataaaacatgaatagtaatttactcgtgactt 54
>RF01062;MIR812;AP008207.1/9692047-9691888 39947:Oryza sativa
Japonica Group
Length = 160
Score = 109 bits (55), Expect = 2e-23
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt 89
||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 159 tttccacgctaaattttgatcgtccgtcttatttgaaatttttttataattaatattttt 100
Query: 90 gttgttatgagatgataaaacatgaatagtacttta 125
||||||||||||||||||||||||||||||| ||||
Sbjct: 99 gttgttatgagatgataaaacatgaatagtatttta 64
>RF01062;MIR812;AP005158.3/28303-28131 39947:Oryza sativa Japonica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 90/104 (86%)
Strand = Plus / Minus
Query: 35 gcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgt 94
|||| ||||||| |||||||||||| |||||| |||||||| |||||||||||
Sbjct: 167 gcgcccaattttaatcgtccgtcttgtttgaattttttttataattagtatttttgttgt 108
Query: 95 tatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 107 tataagatgataaaacatgaatagtactttactcgtgacttatg 64
>RF01062;MIR812;AACV01010650.1/39037-39206 39947:Oryza sativa
Japonica Group
Length = 170
Score = 109 bits (55), Expect = 2e-23
Identities = 94/108 (87%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt 89
||||||||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct: 169 tttccgcgctcaactttgatcgtccgtcttattt-aattttttttataattagtattttt 111
Query: 90 gttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
|||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 110 gttgttatgagatgataaaatatgaatagtactttactcatgacttat 63
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||| ||||| |||||||||||||| |||||||
Sbjct: 34 aataaaacgaatggttaaagttggacacggaaaa 1
>RF01062;MIR812;AACV01006911.1/363-197 39947:Oryza sativa Japonica
Group
Length = 167
Score = 109 bits (55), Expect = 2e-23
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 47 gatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgata 106
||||||||||||||||||||| |||||||||| |||||||||||| ||||||||
Sbjct: 153 gatcgtccgtcttatttgaaatttttttataattagcaattttgttgttataagatgata 94
Query: 107 aaacatgaatagtactttacttgtgacttatg 138
||||||||||| ||||||||| ||||||||||
Sbjct: 93 aaacatgaatactactttactcgtgacttatg 62
>RF01062;MIR812;AACV01002616.1/34373-34543 39947:Oryza sativa
Japonica Group
Length = 171
Score = 109 bits (55), Expect = 2e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 126 ataattagcatttttgttgttataagatgataaaacatgaatagtactttactcgtgact 67
Query: 135 tat 137
|||
Sbjct: 66 tat 64
>RF01062;MIR812;AAAA02004773.1/6937-7109 39946:Oryza sativa Indica
Group
Length = 173
Score = 109 bits (55), Expect = 2e-23
Identities = 78/88 (88%)
Strand = Plus / Minus
Query: 39 tcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatg 98
|||||||| |||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 163 tcaattttaatcgtccgtcttatttgaaatttttttataattaatatttttgttgttatg 104
Query: 99 agatgataaaacatgaatagtactttac 126
||||||||||||||||||||||||||||
Sbjct: 103 agatgataaaacatgaatagtactttac 76
>RF01062;MIR812;AACV01024312.1/7356-7525 39947:Oryza sativa Japonica
Group
Length = 170
Score = 107 bits (54), Expect = 7e-23
Identities = 93/107 (86%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt 89
||||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 169 tttccgcgctcaactttgatcgtccgtcttatttgaa-tttttttataattagtattttt 111
Query: 90 gttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
||||||||||||||| ||||||| ||||||||||||| ||||||||
Sbjct: 110 gttgttatgagatgacaaaacataaatagtactttacacgtgactta 64
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||||||||||||||||||||||
Sbjct: 16 tttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AACV01022766.1/13309-13482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 107 bits (54), Expect = 7e-23
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||| || ||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 174 gtttccgtgcccaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 115
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtg 131
||||||||||||||||||||| ||||||| |||||| ||||||
Sbjct: 114 tgttgttatgagatgataaaatatgaataatactttccttgtg 72
>RF01062;MIR812;AAAA02018660.1/8972-9143 39946:Oryza sativa Indica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 28 agtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattt 87
||||||| ||| ||| |||||||||||||||||||||| |||||||| ||||
Sbjct: 172 agtttccccgcacaaacttgatcgtccgtcttatttgaa-tttttttataattagtattt 114
Query: 88 ttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 113 ttgttgttatgagatgataaaacataaatagtactttactcgtgacttatg 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaa 66
||||||||||||| ||||| ||||||| |||||||||
Sbjct: 3 tttccgcgctcaactttgaccgtccgttttatttgaa 39
>RF01062;MIR812;AAAA02008855.1/40375-40547 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 7e-23
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 36 cgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgtt 95
||||||| |||||||||||||||||||||||| |||||||| |||||| |||||
Sbjct: 166 cgctcaactttgatcgtccgtcttatttgaaatttttttataattagtatttttattgtt 107
Query: 96 atgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||| ||||||||||| | |||| |||||
Sbjct: 106 atgagatgataaaacatgtatagtactttattcgtgatttatg 64
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 40 caattttgatcgtccgtcttattt 63
||||||||||||||||||||||||
Sbjct: 13 caattttgatcgtccgtcttattt 36
>RF01062;MIR812;AL928751.2/51474-51645 4530:Oryza sativa (rice)
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 157 tttgatcgtccgtcatatttgaaatttttttataattagcatttttgttgttatgagatg 98
Query: 104 ataaaacatgaatagtactttacttgtgact 134
|||||||||||||| ||||||| | ||||||
Sbjct: 97 ataaaacatgaatattactttattcgtgact 67
>RF01062;MIR812;AP008211.1/3019166-3019336 39947:Oryza sativa
Japonica Group
Length = 171
Score = 107 bits (54), Expect = 7e-23
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 155 tttgatcgtctgtcttatttgaattatttttataattagtatttttgttgttatgagatg 96
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| ||||||||| ||||||||||
Sbjct: 95 ataaaacatgaataatactttactcgtgacttatg 61
>RF01062;MIR812;AC134230.2/135969-136140 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 7e-23
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 157 tttgatcgtccgtattatttgaaatttttttataattagcatttttattgttatgagatg 98
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||| || |||||||||||||| ||||||||||
Sbjct: 97 ataaaatataaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AP008210.1/21737711-21737871 39947:Oryza sativa
Japonica Group
Length = 161
Score = 107 bits (54), Expect = 7e-23
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||
Sbjct: 142 tttgatcatccgtcttatttgaaatttttttataattagtatttttgctgttatgagatg 83
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| |||||||||||||||||||
Sbjct: 82 ataaaacatgaataacactttacttgtgacttatg 48
>RF01062;MIR812;AACV01012761.1/14916-15085 39947:Oryza sativa
Japonica Group
Length = 170
Score = 107 bits (54), Expect = 7e-23
Identities = 83/95 (87%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 155 tttgatcgttcgtcttatttgaaatttttttataattagtattttcgttgttatgagatg 96
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| ||||||||| ||||||||||
Sbjct: 95 ataaaacatgaatactactttactcgtgacttatg 61
>RF01062;MIR812;AC129226.2/34668-34840 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 3e-22
Identities = 88/102 (86%)
Strand = Plus / Minus
Query: 37 gctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgtta 96
|||||| |||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 163 gctcaactttgatcgtccgtcttatttgaaaaaattttataattagtatttttgttgtta 104
Query: 97 tgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||| |||||| |||||||||| |||||| ||||||||||
Sbjct: 103 cgagataataaaatatgaatagtattttactcgtgacttatg 62
>RF01062;MIR812;AAAA02014084.1/6055-5884 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| | | ||||||||| |||||||||| ||| ||||||| |||||
Sbjct: 172 gtttccgcgccccactttgatcgttcgtcttatttaaaaattttgtataattaatatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 112 tgttgttatgagataataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AP003808.3/36375-36546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 105 bits (53), Expect = 3e-22
Identities = 94/110 (85%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||| |||||||||||||||||| ||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgcccaattttgatcgtccgtcatatttgaaaaaaatttataattagtatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||| || ||||||| |||| | ||||||||||
Sbjct: 112 tgttgttatgagatgataaaatataaatagtattttattcgtgacttatg 63
>RF01062;MIR812;AACV01017448.1/7920-7765 39947:Oryza sativa Japonica
Group
Length = 156
Score = 103 bits (52), Expect = 1e-21
Identities = 78/89 (87%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||||||||||||||||| ||||||| || ||||||||||||||
Sbjct: 156 gtttccgcgcccaattttgatcgtccgtattatttgcaatttttttataattagcatttt 97
Query: 89 tgttgttatgagatgataaaacatgaata 117
||||| |||||||||||||||||||||||
Sbjct: 96 tgttgctatgagatgataaaacatgaata 68
>RF01062;MIR812;AP008217.1/4350763-4350922 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 114 ataattagtatttttgttgttatgagatgataaaacatgaatggtactttactcgtgact 55
Query: 135 tatg 138
||||
Sbjct: 54 tatg 51
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttattt 63
||||||| | ||||||| ||||||||||||||||
Sbjct: 2 tttccgcacccaattttaatcgtccgtcttattt 35
>RF01062;MIR812;AP008207.1/7412250-7412091 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 1e-21
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgag 100
||||||||||||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct: 148 aattttgatcgtccgtcttatttgaaaactttttataattagtatttttattgttatgag 89
Query: 101 atgataaaacatgaatagtactttacttgtgacttat 137
|||||||||| | |||||||||||| ||||||||||
Sbjct: 88 atgataaaacgtaaatagtactttatgtgtgacttat 52
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttattt 63
|||||| | |||| ||||||||||||||||||||
Sbjct: 2 tttccgtgttcaactttgatcgtccgtcttattt 35
>RF01062;MIR812;AC121365.2/126856-127026 39947:Oryza sativa Japonica
Group
Length = 171
Score = 103 bits (52), Expect = 1e-21
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||| | ||| ||| |||||||||||||||||||| || ||||| |||||
Sbjct: 171 gtttccgcacccaactttaatcgtccgtcttatttgaaatttttttatgattagtatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||||||||| ||||||||||||||||||||||||||| ||| |||||
Sbjct: 111 tgttgttatgatatgataaaacatgaatagtactttactcgtggcttat 63
>RF01062;MIR812;AAAA02019804.1/47754-47923 39946:Oryza sativa Indica
Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 33 ccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgtt 92
|||||| ||| ||| |||||||||||||||| ||| |||||||| |||||||||
Sbjct: 166 ccgcgcccaactttaatcgtccgtcttattttaaatttttttataattagtatttttgtt 107
Query: 93 gttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||||||||||||||| |||||||||| |||||| |||||||||
Sbjct: 106 gttatgagatgataaaatatgaatagtattttactcgtgacttat 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||| ||||||||||||||||||||||||
Sbjct: 34 aataagacggacggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 126 ataattagtatttttgttgttatgagatgataaaacatgaatagtgctttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
Score = 58.0 bits (29), Expect = 6e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaa 197
||||||||||||||| |||||||||||||||||
Sbjct: 34 aataagacgaacggtcaaagttggacgcggaaa 2
>RF01062;MIR812;AACV01018820.1/15282-15123 39947:Oryza sativa
Japonica Group
Length = 160
Score = 103 bits (52), Expect = 1e-21
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||| |||||| ||||||||||||||||| |||||||| |||||
Sbjct: 160 gtttccgcgcccaactttgatagtccgtcttatttgaaatttttttataattagtatttt 101
Query: 89 tgttgttatgagatgataaaacatgaatagtacttta 125
| ||||||| |||||||||||||||||||||||||||
Sbjct: 100 tattgttataagatgataaaacatgaatagtacttta 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||| ||| ||||||||||||||||||
Sbjct: 34 aataagacgaatggtcaaagttggacgcggaaaa 1
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 120 ataattagtatttttattgttatgagatgataaaacatgaatagtactttactcgtgact 61
Query: 135 tatg 138
||||
Sbjct: 60 tatg 57
>RF01062;MIR812;AP006528.2/106927-106756 39947:Oryza sativa Japonica
Group
Length = 172
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 126 ataattaatatttttgttgttatgagatgataaaacatgaataatactttacttgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;AP008208.1/15408252-15408424 39947:Oryza sativa
Japonica Group
Length = 173
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 127 ataattagtatttgtgttgttatgagatgataaaacatgaatagtactttactcgtgact 68
Query: 135 tatg 138
||||
Sbjct: 67 tatg 64
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||||||||||||||||||||||
Sbjct: 16 tttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AACV01005899.1/988-1157 39947:Oryza sativa Japonica
Group
Length = 170
Score = 103 bits (52), Expect = 1e-21
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| |||||| |||||||||||||||| ||| |||||||| |||||
Sbjct: 170 gtttccgcgcctaattttaatcgtccgtcttatttaaaatttgtttataattagtatttt 111
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
| ||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 110 tattgctatgagatgataaaacataaataatactttacttgtgacttat 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
|||||||| |||||||||||||||||||||||||
Sbjct: 34 aataagacaaacggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AACV01014495.1/45963-46136 39947:Oryza sativa
Japonica Group
Length = 174
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||
Sbjct: 126 ataattagcatttttgttgctatgagatgataaagcatgaatagtactttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;AP008209.1/27052678-27052511 39947:Oryza sativa
Japonica Group
Length = 168
Score = 103 bits (52), Expect = 1e-21
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 123 ataattattatttttgttgttatgagatgataaaacatgaatagtactttactcgtgact 64
Query: 135 tatg 138
||||
Sbjct: 63 tatg 60
>RF01058;MIR806;AP004661.3/132951-132713 39947:Oryza sativa Japonica
Group
Length = 239
Score = 103 bits (52), Expect = 1e-21
Identities = 106/125 (84%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnn 73
|||||||||||||||||||||| || ||| ||| ||||| ||||||||||||||
Sbjct: 21 taagtgcagccatgagtttccgtgcccaacttt-atcgttcgtcttatttgaaatttttt 79
Query: 74 nataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgac 133
|| ||||| |||| | ||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 80 tatgattagtatttctattgttattagatgataaaacatgaatagtactttatgtgtgac 139
Query: 134 ttatg 138
|||||
Sbjct: 140 ttatg 144
Score = 58.0 bits (29), Expect = 6e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaa 66
||||||||||||||| |||||| || ||| |||||||||| || |||||||||
Sbjct: 219 taagtgcagccatgattttccgtgcccaactttgatcgtctgtgttatttgaa 167
>RF01062;MIR812;AAAA02017708.1/13355-13199 39946:Oryza sativa Indica
Group
Length = 157
Score = 101 bits (51), Expect = 4e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 114 ataattagcaattttgttgttataagatgataaaacatgaatactactttacttgtgact 55
Query: 135 tat 137
|||
Sbjct: 54 tat 52
>RF01062;MIR812;ABRL01001405.1/19095-18926 65489:Oryza barthii
Length = 170
Score = 101 bits (51), Expect = 4e-21
Identities = 94/109 (86%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 170 gttttcgcgctcaattttgatcgttcgtcttatttgaaattattt-ataattagtatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
| |||||||||||||||||||||| ||||| |||||||| || ||||||
Sbjct: 111 tattgttatgagatgataaaacattaataggactttactcgtaacttat 63
>RF01062;MIR812;AP008215.1/2023967-2023806 39947:Oryza sativa
Japonica Group
Length = 162
Score = 101 bits (51), Expect = 4e-21
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 35 gcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgt 94
||||||| ||||||||| |||||||||||||| |||||||| |||||| || |
Sbjct: 155 gcgctcagctttgatcgttcgtcttatttgaaatttttttataattagtatttttattat 96
Query: 95 tatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 95 tatgagatgataaaacataaatagtactttactcgtgacttatg 52
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aataagacgaacggttaaagttggacgcggaaaac 1
>RF01062;MIR812;AP008215.1/16622921-16622752 39947:Oryza sativa
Japonica Group
Length = 170
Score = 101 bits (51), Expect = 4e-21
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 47 gatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgata 106
|||| |||||||||||||||| |||||||| |||||||||| ||||||||||||
Sbjct: 152 gatcatccgtcttatttgaaaattttttataattagtatttttgttgctatgagatgata 93
Query: 107 aaacatgaatagtactttacttgtgacttatg 138
||||||||||| ||||||||| ||||||||||
Sbjct: 92 aaacatgaataatactttactcgtgacttatg 61
>RF01062;MIR812;AP008212.1/5981335-5981494 39947:Oryza sativa
Japonica Group
Length = 160
Score = 101 bits (51), Expect = 4e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 76 taattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactt 135
||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 114 taattagtatttttgttgttataagatgataaaacatgaatagtactttactcgtgactt 55
Query: 136 atg 138
|||
Sbjct: 54 atg 52
>RF01062;MIR812;AACV01000150.1/583-737 39947:Oryza sativa Japonica
Group
Length = 155
Score = 101 bits (51), Expect = 4e-21
Identities = 80/92 (86%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 155 gttttcgcgctcaactttgatcgtccgtcttatttgaattttttttataattagcatttt 96
Query: 89 tgttgttatgagatgataaaacatgaatagta 120
||||||||| ||||||||||||||||| ||||
Sbjct: 95 tgttgttataagatgataaaacatgaacagta 64
>RF01062;MIR812;AP008207.1/21491769-21491941 39947:Oryza sativa
Japonica Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| || ||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 158 tttgatcatctgtcttatttgaaatttttttataattagtatttttgttgttatgagatg 99
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||| |||||| |||||||||||
Sbjct: 98 ataaaacatgaatagcactttatgtgtgacttatg 64
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| |||||||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 157 tttgatcatccgtcttatttgaaatttttttataattagtatttttattgttatgagatg 98
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||| ||||||||||
Sbjct: 97 ataaaacatgaatagtactttatacgtgacttatg 63
>RF01062;MIR812;AP003705.3/61480-61311 39947:Oryza sativa Japonica
Group
Length = 170
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| |||||||||||||||| |||||||||||||||||| |||| |||||
Sbjct: 155 tttgatcatccgtcttatttgaaatttttttataattagcatttttgtttttataagatg 96
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| ||||||||| |||||||||
Sbjct: 95 ataaaacatgaataatactttactcatgacttatg 61
>RF01062;MIR812;AACV01022357.1/25126-24956 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 77 aattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
|||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 124 aattagtatttttgttgttatgagatgataaaacatgaatactactttactcgtgactta 65
Query: 137 tg 138
||
Sbjct: 64 tg 63
>RF01062;MIR812;AP008214.1/8842812-8842970 39947:Oryza sativa
Japonica Group
Length = 159
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| |||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 144 tttgatcatccgtcttatttgaaaaaattttataattagtatttttgttgttatgagata 85
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||| |||||||||||| | ||||||||||
Sbjct: 84 ataaaacataaatagtactttattcgtgacttatg 50
>RF01062;MIR812;AACV01008241.1/3292-3120 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 77/87 (88%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt-gttgttatg 98
|||||||||||||| ||||||||||||| |||||||| |||||| |||||||||
Sbjct: 162 caattttgatcgtctgtcttatttgaaatttttttataattagtattttttgttgttatg 103
Query: 99 agatgataaaacatgaatagtacttta 125
|||||||||||||||||||||||||||
Sbjct: 102 agatgataaaacatgaatagtacttta 76
>RF01062;MIR812;AAAA02011051.1/19891-19721 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 156 tttgatcgtccatcttatttgaaaattttttataattagtatttttgttgttatgagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||| |||| |||| ||||||||| ||||||||||
Sbjct: 96 ataagacataaataatactttactcgtgacttatg 62
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 171 acgaacggttaaagttggacgcggaaaa 198
||||||||||||||||||||||| ||||
Sbjct: 28 acgaacggttaaagttggacgcgaaaaa 1
>RF01062;MIR812;AACV01012067.1/1001-829 39947:Oryza sativa Japonica
Group
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||
Sbjct: 158 tttgatcgtccgtcttatttaaaatttttttataattagcgtttttgttattatgagatg 99
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||| ||| || ||||||||||
Sbjct: 98 ataaaacatgaatagtattttgctcgtgacttatg 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||| |||||||| || |||||||
Sbjct: 35 aataagacgaacggtaaaagttgggcgtggaaaac 1
>RF01062;MIR812;AAAA02027066.1/8468-8298 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| | |||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 156 tttgatcattcgtcttatttgaaaaaattttataattagcatttttgttgttataggatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
| |||||||||||||||||| ||||||||||||||
Sbjct: 96 aaaaaacatgaatagtacttcacttgtgacttatg 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||| ||||||||||||||||||||||
Sbjct: 34 aataagacgaatggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AACV01002667.1/14693-14523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 2e-20
Identities = 85/99 (85%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||| || ||| ||||||||||| |||||||| ||| |||||||| |||||
Sbjct: 171 gtttccgtgcccaactttgatcgtccatcttatttaaaatttttttataattagtatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttact 127
||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cgttgttatgagatgataaaacatgaatagtactttact 73
>RF01062;MIR812;AACV01002500.1/8556-8389 39947:Oryza sativa Japonica
Group
Length = 168
Score = 99.6 bits (50), Expect = 2e-20
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 43 ttttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagat 102
|||| |||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 153 tttttatcgtccgtcttatttgaaaaatttttataattaatatttttgttgttatgagat 94
Query: 103 gataaaacatgaatagtactttacttgtgacttat 137
|||||||||| |||| ||||||||| |||||||||
Sbjct: 93 gataaaacataaataatactttactcgtgacttat 59
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||||||||||||| ||||||||||
Sbjct: 34 aataagacgaacggttaaagttgaacgcggaaaa 1
>RF01062;MIR812;ABRL01001385.1/28807-28635 65489:Oryza barthii
Length = 173
Score = 99.6 bits (50), Expect = 2e-20
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 28 agtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattt 87
|||||| |||| ||| ||||||||||||| |||||||||| |||||||||| ||
Sbjct: 173 agtttctgcgcccaactttgatcgtccgttttatttgaaatttttttataattagcagtt 114
Query: 88 ttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|| ||||||| ||||||||||| ||||||| ||||||||| ||||||||||
Sbjct: 113 ttattgttataagatgataaaatatgaataatactttactcgtgacttatg 63
>RF01062;MIR812;AACV01008873.1/15378-15551 39947:Oryza sativa
Japonica Group
Length = 174
Score = 99.6 bits (50), Expect = 2e-20
Identities = 94/111 (84%)
Strand = Plus / Minus
Query: 28 agtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattt 87
|||||| |||| ||| |||||||||||||||||||| ||| |||||||| | ||
Sbjct: 174 agtttcagcgcccaactttgatcgtccgtcttatttaaaatttttttataattagtaatt 115
Query: 88 ttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||| ||||||||||| ||||||| ||||||||| ||||||||||
Sbjct: 114 ttgttgttataagatgataaaatatgaatactactttactcgtgacttatg 64
>RF01062;MIR812;AC073392.3/147171-147000 4530:Oryza sativa (rice)
Length = 172
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| ||| ||| ||||| ||| |||||||||| ||||||||||||||
Sbjct: 172 gtttccgcgcccaactttaatcgttcgttttatttgaaatttttttataattagcatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||| |||||||||||||| ||||||||||| || ||||||||||
Sbjct: 112 tgttgttacaagatgataaaacataaatagtactttcctcgtgacttatg 63
>RF01062;MIR812;AC118347.2/114612-114782 39947:Oryza sativa Japonica
Group
Length = 171
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||| ||||| |||||||||||||||||||| || |||||||| |||||
Sbjct: 171 gttttcgcactcaactttgatcgtccgtcttatttaaattttttttataattagtatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 111 ggttgttatgagatgataaaacattaataatactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02033258.1/7726-7553 39946:Oryza sativa Indica
Group
Length = 174
Score = 97.6 bits (49), Expect = 6e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttact 127
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 125 ataattagcatttttgttgttatgagatgataaaacataaatagtactttact 73
>RF01062;MIR812;AP008210.1/18494792-18494961 39947:Oryza sativa
Japonica Group
Length = 170
Score = 97.6 bits (49), Expect = 6e-20
Identities = 95/110 (86%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 170 gtttccgcgcctaactttgatcgtccgtcttatttgaa-tttttttataattagcatttt 112
Query: 89 tgttgttatgagatgataaaa-catgaatagtactttacttgtgacttat 137
||||||||| ||||||||||| |||||||| ||||||||| |||||||||
Sbjct: 111 tgttgttattagatgataaaaccatgaataatactttactcgtgacttat 62
>RF01062;MIR812;AACV01016492.1/19876-19710 39947:Oryza sativa
Japonica Group
Length = 167
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||||| ||| ||||||||| ||| |||||||||| |||||||| | |||
Sbjct: 167 gtttccgcgtccaactttgatcgttcgttttatttgaaatttttttataattagaagttt 108
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||| |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 107 tgttgttataagatgataaaacatgaatggtactttactcgtgacttatg 58
>RF01062;MIR812;AL731585.5/116334-116173 4530:Oryza sativa (rice)
Length = 162
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||| ||||||| ||||||| ||| |||||||||||| ||||||| |||||
Sbjct: 162 gtttccacgctcaactttgatcatccatcttatttgaaatttttttataattaatatttt 103
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 102 gattgttatgagatgataaaatatgaatagtactttactcgtgacttatg 53
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 97.6 bits (49), Expect = 6e-20
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||| |||| |||||||||||||||||||| ||| ||||| | |||||
Sbjct: 171 gtttccgcattcaactttgatcgtccgtcttattt-aaaattttttataatcaatatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 112 tattgttatgagatgataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AACV01011713.1/13667-13835 39947:Oryza sativa
Japonica Group
Length = 169
Score = 97.6 bits (49), Expect = 6e-20
Identities = 87/102 (85%)
Strand = Plus / Minus
Query: 37 gctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgtta 96
|||||| ||| || ||||||||||||||||| |||||||| |||||||||||||
Sbjct: 161 gctcaactttaattgtccgtcttatttgaaaattttttataattagtatttttgttgtta 102
Query: 97 tgagatgataaaacatgaatagtactttacttgtgacttatg 138
| |||||||||||||| ||||||| |||||| ||||||||||
Sbjct: 101 taagatgataaaacataaatagtaatttactagtgacttatg 60
>RF01062;MIR812;AACV01023650.1/6583-6755 39947:Oryza sativa Japonica
Group
Length = 173
Score = 97.6 bits (49), Expect = 6e-20
Identities = 52/53 (98%)
Strand = Plus / Minus
Query: 86 ttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 115 ttttgttgttatgagatgataaaacatgaataatactttacttgtgacttatg 63
>RF01062;MIR812;AY946410.1/199-31 4530:Oryza sativa (rice)
Length = 169
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||||||| ||||||||||||| || ||||| |||||||| |||||
Sbjct: 169 gtttccgcgctcaactttgatcgtccgttctacttgaattttttttataattagtatttt 110
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| |||||||||||||||||||| ||||||||||||| || ||||||||||
Sbjct: 109 tattgttatgagatgataaaacgtgaatagtactttgctcgtgacttatg 60
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| || ||||||||| |||||||||| ||| |||||||| ||||
Sbjct: 172 gtttccgcgcctaactttgatcgttcgtcttatttaaaatttttttataattagtattta 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 112 tattgttatgagatgataaaacatgaatagtactttactcgtaacttatg 63
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 6e-20
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgag 100
||||||||||||||||||||||| ||| |||||||| |||||| |||| |||||
Sbjct: 160 aattttgatcgtccgtcttatttaaaattgttttataattagtatttttattgtcatgag 101
Query: 101 atgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||| ||||||||||
Sbjct: 100 atgataaaacatgaatagtactttatacgtgacttatg 63
>RF01062;MIR812;AAAA02013629.1/5990-6158 39946:Oryza sativa Indica
Group
Length = 169
Score = 97.6 bits (49), Expect = 6e-20
Identities = 58/61 (95%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 124 ataattagtatttttgttgttatgagatgataaaacatgaataatactttactcgtgact 65
Query: 135 t 135
|
Sbjct: 64 t 64
>RF01062;MIR812;AACV01025578.1/4137-4307 39947:Oryza sativa Japonica
Group
Length = 171
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||| || ||||||||||||||||||||||| |||| |||||||||
Sbjct: 171 gtttccgcgcctaactttgatcgtccgtcttatttgaattttttttataactagcatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
| ||||||||||||||||||| ||||||||||||||| | || |||||||
Sbjct: 111 tattgttatgagatgataaaatatgaatagtactttagtcgtaacttatg 62
>RF01062;MIR812;AP008209.1/5420310-5420125 39947:Oryza sativa
Japonica Group
Length = 186
Score = 97.6 bits (49), Expect = 6e-20
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
||||||| ||||| ||| |||||||||| |||||||| |||||| |||||||||
Sbjct: 174 caattttaatcgttcgttttatttgaaatttttttataattagtatttttattgttatga 115
Query: 100 gatgataaaacatgaatagtactttacttgtgacttat 137
||||||||||||| |||||||||||||| |||||||||
Sbjct: 114 gatgataaaacataaatagtactttactcgtgacttat 77
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||| | ||||| |||||||||||||||||||
Sbjct: 35 aataagatggacggtcaaagttggacgcggaaaac 1
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 97.6 bits (49), Expect = 6e-20
Identities = 83/95 (87%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 157 tttgatcgtccgtcttatttgaaatttttt-ataattagtatttttgttgttatgagatg 99
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||| |||| ||||||||||
Sbjct: 98 ataaaacatgaatagtattttatgcgtgacttatg 64
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 3 tttccgtgctcaactttgatcgtccgtcttatttgaaa 40
>RF01062;MIR812;AP003335.4/153903-154072 39947:Oryza sativa Japonica
Group
Length = 170
Score = 97.6 bits (49), Expect = 6e-20
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 34 cgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttg 93
||||| |||||||||||||| ||||||||| ||| |||||||| ||||| ||||
Sbjct: 165 cgcgcacaattttgatcgtctgtcttatttaaaatttttttataattagtattttcgttg 106
Query: 94 ttatgagatgataaaacatgaatagtactttact 127
||||||||||||||||||||||||| ||||||||
Sbjct: 105 ttatgagatgataaaacatgaatagaactttact 72
>RF01062;MIR812;AY946455.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||| |||||| ||||||| | |||||||||| || ||||||||||||||
Sbjct: 171 gtttccgtgctcaactttgatcattcgtcttattttaattttttttataattagcatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||| ||| |||||||||||| |||||||||
Sbjct: 111 tgttgttatgagatgataaaacgtgagtagtactttactcctgacttatg 62
>RF01062;MIR812;AB026295.2/12894-12723 39947:Oryza sativa Japonica
Group
Length = 172
Score = 97.6 bits (49), Expect = 6e-20
Identities = 93/110 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||| ||||||||||||| | ||||||||||||| ||||||||||||||
Sbjct: 172 gttttcgcactcaattttgatcattcgtcttatttgaattttttttataattagcatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||| ||||||||||||| ||||| |||| ||||||| |||||||||
Sbjct: 112 tgttgttctgagatgataaaatatgaacagtattttacttatgacttatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||| |||||||||||||||| || |||||||
Sbjct: 35 aataagatgaacggttaaagttgggcgtggaaaac 1
>RF01062;MIR812;AAAA02006784.1/12953-12794 39946:Oryza sativa Indica
Group
Length = 160
Score = 95.6 bits (48), Expect = 3e-19
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt 89
|||||||| |||| ||||||| |||||||||||| ||| |||||||| ||||||
Sbjct: 159 tttccgcgttcaactttgatcatccgtcttatttaaaaattttttataattagtattttt 100
Query: 90 gttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 99 tttgttatgcaatgataaaacatgaatagtactttatttgcgacttatg 51
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||| ||| ||||| ||||||||||||||
Sbjct: 34 aataagacggacgattaaaattggacgcggaaaa 1
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttattt 63
|||||||| ||||||| ||||||||||||||||
Sbjct: 2 tttccgcgtccaattttaatcgtccgtcttattt 35
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 117 ataattagtatttttattgttataagatgataaaacatgaatagtactttactcgtgact 58
Query: 135 tatg 138
||||
Sbjct: 57 tatg 54
>RF01062;MIR812;AAAA02018757.1/7221-7031 39946:Oryza sativa Indica
Group
Length = 191
Score = 95.6 bits (48), Expect = 3e-19
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||| ||||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 191 gttttcgcactcaactttgatcgtccgtcttatttgaaaactttttataattagtatttt 132
Query: 89 tgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| ||||| |||||| |||||||||||||||
Sbjct: 131 tgttgttacgagataataaaatatgaatagtacttta 95
>RF01062;MIR812;AACV01017406.1/31277-31108 39947:Oryza sativa
Japonica Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 125 ataattaatatttttgttgttatgagatgataaaacatgaatagtactttacaagtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
>RF01062;MIR812;AP008218.1/26666947-26666770 39947:Oryza sativa
Japonica Group
Length = 178
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 132 ataattagtatttttattgttatgagatgataaaatataaatagtactttacttgtgact 73
Query: 135 tatg 138
||||
Sbjct: 72 tatg 69
>RF01062;MIR812;AAAA02015545.1/24306-24475 39946:Oryza sativa Indica
Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct: 125 ataattagtatttttgttgttatgagatgataaaacatgagtattactttactcgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
>RF01062;MIR812;AACV01007418.1/3561-3398 39947:Oryza sativa Japonica
Group
Length = 164
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 119 ataattaatatttttattgttatgagatgataaaacatgaatagtactttactcgtgact 60
Query: 135 tatg 138
||||
Sbjct: 59 tatg 56
>RF01062;MIR812;AAAA02021742.1/8892-8725 39946:Oryza sativa Indica
Group
Length = 168
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||| |
Sbjct: 122 ataattagcatttttgttgttatgagataataaaacataaatattactttacttgtgatt 63
Query: 135 tatg 138
||||
Sbjct: 62 tatg 59
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
|||||||||||||||||||||| | |||||||||
Sbjct: 34 aataagacgaacggttaaagttaggcgcggaaaa 1
>RF01062;MIR812;AAAA02004709.1/10898-10729 39946:Oryza sativa Indica
Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct: 125 ataattagtatttttgttgttatgagatgataaaacatgaataatactttactcgcgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
>RF01062;MIR812;AY946463.1/200-28 4530:Oryza sativa (rice)
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 126 ataattagtatttttattgttataagatgataaaacatgaatagtactttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||| ||| |||||| ||||||||||||
Sbjct: 35 aataagacgaatggtcaaagtttgacgcggaaaac 1
>RF01062;MIR812;AP008210.1/28165092-28164921 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||
Sbjct: 126 ataattagcatttttgttgttataagatgataaaacatggatattactttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;AAAA02011645.1/12642-12812 39946:Oryza sativa Indica
Group
Length = 171
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||| ||| |||||||||||||||||| |||||||||||||| ||||||
Sbjct: 125 ataattagcatttttattgctatgagatgataaaacataaatagtactttactcgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||| |||||| | ||||||||||
Sbjct: 35 aataagacgaacggtcaaagttcggcgcggaaaac 1
>RF01062;MIR812;AP005685.3/37016-36858 39947:Oryza sativa Japonica
Group
Length = 159
Score = 95.6 bits (48), Expect = 3e-19
Identities = 57/60 (95%)
Strand = Plus / Minus
Query: 79 ttagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 111 ttagtatttttgttgttatgagatgataaaacatgaatagtactttactcatgacttatg 52
>RF01062;MIR812;AACV01023092.1/7591-7760 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 124 ataattaatatttttgttgttatgagatgataaagcatgaataatactttacttgtgact 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
>RF01062;MIR812;AACV01001141.1/8371-8200 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct: 126 ataattagcatttttgttgttatgaaatgataaaatatgaatagtactttactcatgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||| |||||||||||||||| |||| |||||
Sbjct: 35 aataagatgaacggttaaagttgggcgcgaaaaac 1
>RF01062;MIR812;AACV01020478.1/2846-3015 39947:Oryza sativa Japonica
Group
Length = 170
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 126 ataattagtatttttattgttatgagatgataaaatatgaatagtactttacatgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;AAAA02022985.1/2863-2691 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 126 ataattattatttttgttgttatgagatgataaaacatgaatagtactttactcgtcact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;AP003735.4/57277-57448 39947:Oryza sativa Japonica
Group
Length = 172
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 127 ataattagtatttttgttgttatgagatgataaaacatgaataatattttacttgcgact 68
Query: 135 tatg 138
||||
Sbjct: 67 tatg 64
>RF01062;MIR812;AJ245900.1/3175-3343 4530:Oryza sativa (rice)
Length = 169
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 124 ataattagtatttttgttgttatgagatgataaaacataaatagtactttgctcgtgact 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
>RF01062;MIR812;AY946429.1/28-188 4530:Oryza sativa (rice)
Length = 161
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 115 ataattagcaattttgttgttataagatgataaaacataaatagtactttactcgtgact 56
Query: 135 tatg 138
||||
Sbjct: 55 tatg 52
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 81 ataattagtatttttattgttatgagatgataaaacatgaatagtactttacgcgtgact 140
Query: 135 tatg 138
||||
Sbjct: 141 tatg 144
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||||||||| |||||| || ||| ||||||||||||||||||||||||
Sbjct: 220 taagtgcagccatgattttccgtgcccaactttgatcgtccgtcttatttgaaa 167
>RF01062;MIR812;AC119073.1/10812-10640 39947:Oryza sativa Japonica
Group
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 35 gcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgt 94
|||| ||| ||||||||||||| |||||||| | |||||||| |||||||||||
Sbjct: 166 gcgcccaactttgatcgtccgttttatttgagaaatttttataattagtatttttgttgt 107
Query: 95 tatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 106 tatgagatgataaaatataaatagtactttactcatgacttatg 63
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||| ||| ||| |||||| |||||||||||||
Sbjct: 3 tttccgcgcccaactttaatcgtctgtcttatttgaaa 40
>RF01062;MIR812;AC105743.8/84786-84958 39947:Oryza sativa Japonica
Group
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 52 tccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgat-aaaac 110
|||||||||||||||| |||||||| |||||||||||||||||||||| |||||
Sbjct: 149 tccgtcttatttgaaaattttttataattagtatttttgttgttatgagatgataaaaac 90
Query: 111 atgaatagtactttacttgtgacttatg 138
||||| | ||||||||||||||||||||
Sbjct: 89 atgaacaatactttacttgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttattt 63
|||||| || ||||||||||||||||||||||||
Sbjct: 3 tttccgggcccaattttgatcgtccgtcttattt 36
>RF01062;MIR812;AP008218.1/23369827-23369655 39947:Oryza sativa
Japonica Group
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
||||||||||||||||||||||||||| |||||||| |||||||||||||| |
Sbjct: 162 caattttgatcgtccgtcttatttgaattctttttataattagtatttttgttgttatca 103
Query: 100 gatgataaaacatgaatagtactttact 127
|||||||||||||||| | |||||||||
Sbjct: 102 gatgataaaacatgaacattactttact 75
>RF01062;MIR812;AP008212.1/18810223-18810054 39947:Oryza sativa
Japonica Group
Length = 170
Score = 93.7 bits (47), Expect = 1e-18
Identities = 77/88 (87%), Gaps = 1/88 (1%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
|||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 159 caattttgatcgtccgtcttatttgaaattatttt-taattaatatttttgttgttatga 101
Query: 100 gatgataaaacatgaatagtactttact 127
|||||||||||||||||| |||||||||
Sbjct: 100 gatgataaaacatgaatattactttact 73
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
|||||||||||||||||||||||| |||||||||
Sbjct: 34 aataagacgaacggttaaagttgggcgcggaaaa 1
>RF01062;MIR812;AP008207.1/36403836-36403667 39947:Oryza sativa
Japonica Group
Length = 170
Score = 93.7 bits (47), Expect = 1e-18
Identities = 85/100 (85%)
Strand = Plus / Minus
Query: 28 agtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcattt 87
|||||| |||||||| |||||||||||||||||||| || || ||||| ||||
Sbjct: 170 agtttctgcgctcaactttgatcgtccgtcttatttaaattttttttatgattagtattt 111
Query: 88 ttgttgttatgagatgataaaacatgaatagtactttact 127
|| |||||||||||||||||||||| ||||||||||||||
Sbjct: 110 ttattgttatgagatgataaaacataaatagtactttact 71
>RF01062;MIR812;AAAA02006966.1/65891-66058 39946:Oryza sativa Indica
Group
Length = 168
Score = 93.7 bits (47), Expect = 1e-18
Identities = 92/108 (85%), Gaps = 3/108 (2%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||| |||||||||||||||||||||||| ||| ||||||| |||||
Sbjct: 168 gttttcgcgcccaattttgatcgtccgtcttatttaaaaaaaat---taattagtatttt 112
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
| ||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 111 tattgttatgagatgataaaacatgaatattactttacacgtgactta 64
>RF01062;MIR812;CR855125.1/94683-94855 4530:Oryza sativa (rice)
Length = 173
Score = 93.7 bits (47), Expect = 1e-18
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 117 atttttgttgttatgaaatgataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AAAA02017582.1/50910-50736 39946:Oryza sativa Indica
Group
Length = 175
Score = 93.7 bits (47), Expect = 1e-18
Identities = 84/98 (85%), Gaps = 3/98 (3%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 160 tttgatcgtccgtcttatttgaaaattttttataattagtatttttattgttatgagatg 101
Query: 104 at---aaaacatgaatagtactttacttgtgacttatg 138
|| ||||||||||||||| |||||| ||||||||||
Sbjct: 100 atcataaaacatgaatagtattttactcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||| |||||| ||| ||||||||||||||||||||
Sbjct: 3 tttccgtgctcaactttaatcgtccgtcttatttgaaa 40
>RF01062;MIR812;AP004764.2/33491-33662 39947:Oryza sativa Japonica
Group
Length = 172
Score = 93.7 bits (47), Expect = 1e-18
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ataattagtatttttgttgttatgagatgataaaacatgaatagtacttta 75
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
|||||||||||||||||||||| ||||||||||||
Sbjct: 35 aataagacgaacggttaaagttagacgcggaaaac 1
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 93.7 bits (47), Expect = 1e-18
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnn 73
|||||||| | || ||||| || || ||| ||||||| |||||||||||||||
Sbjct: 21 taagtgcaactataagttttcgtgcccaactttgatcatccgtcttatttgaactttttt 80
Query: 74 nataattagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 81 tataattagtatttttcttgttatgagatgataaaacatgaatagtacttta 132
Score = 58.0 bits (29), Expect = 6e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacactta 213
||||||||| ||| |||||||||| | ||||||| ||||||||||||||
Sbjct: 173 aataagacggacgattaaagttgggcacggaaaatcatggctacactta 221
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttga 65
|||||| |||||||| |||||| || ||| ||| ||||||||||||||||||
Sbjct: 221 taagtgtagccatgattttccgtgcccaactttaatcgtccgtcttatttga 170
>RF01062;MIR812;ABRL01000278.1/1338-1168 65489:Oryza barthii
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 31 ttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttg 90
|||||||| |||||| ||||||| |||||||| ||| |||||||| ||||||
Sbjct: 169 ttccgcgcctaattttaatcgtccatcttatttaaaatttttttataattagtattttta 110
Query: 91 ttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 109 ttgctatgagatgataaaacataaataatactttacttgtgacttat 63
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
|||||||| ||||||||||||||| ||||||||||
Sbjct: 35 aataagacaaacggttaaagttgggcgcggaaaac 1
>RF01062;MIR812;AAAA02017831.1/48225-48390 39946:Oryza sativa Indica
Group
Length = 166
Score = 91.7 bits (46), Expect = 4e-18
Identities = 83/95 (87%), Gaps = 3/95 (3%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||||||| |||||||| |||| |||||||||||||||
Sbjct: 151 tttgatcgtccgtcttatttgaaatttttt-ataattagtatttgtgttgttatgagatg 93
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| || ||||||||||||||||
Sbjct: 92 ataaaacatgaataata--ttacttgtgacttatg 60
>RF01062;MIR812;AAAA02036738.1/10015-9844 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
||||||| |||||||||||||||||||| |||||||| |||||||||||||| |
Sbjct: 161 caattttaatcgtccgtcttatttgaaatatttttataattagtatttttgttgttataa 102
Query: 100 gatgataaaacatgaatagtactttacttgtgact 134
||| |||||| | ||||||||||||||| ||||||
Sbjct: 101 gataataaaatacgaatagtactttactcgtgact 67
>RF01062;MIR812;AAAA02018686.1/12077-11907 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||| |||||||||||||| ||||||| |||||| |||||||||||||
Sbjct: 156 tttgatcgttcgtcttatttgaaagttttttataattaatatttttattgttatgagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||| || |||||||||||||| ||||||||||
Sbjct: 96 ataaaatataaatagtactttactcgtgacttatg 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttattt 63
||||||||| ||| ||||| ||||||||||||||
Sbjct: 2 tttccgcgcccaactttgaccgtccgtcttattt 35
>RF01062;MIR812;AP008211.1/21911813-21911642 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 157 tttgatcatccatcttatttgaaattattttataattagtatttttgttgttatgagatg 98
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||| |||| || |||||| ||||||||||
Sbjct: 97 ataaaacataaataatattttactcgtgacttatg 63
>RF01062;MIR812;AACV01002156.1/15981-15811 39947:Oryza sativa
Japonica Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 87/103 (84%)
Strand = Plus / Minus
Query: 36 cgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgtt 95
||||||| |||||||||||||||||||||||| | |||||| |||||| |||||
Sbjct: 164 cgctcaactttgatcgtccgtcttatttgaaatttttttacaattagtatttttattgtt 105
Query: 96 atgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||| || |||| | || |||||||
Sbjct: 104 atgagatgataaaacatgaataatattttattcgttacttatg 62
>RF01062;MIR812;AP003203.3/101179-101008 39947:Oryza sativa Japonica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 157 tttgatcgtccatcttatttgaattttttttataattattatttttgttgttatgagatg 98
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||| | ||||||||| ||||||||||
Sbjct: 97 ataaaacatgaacaatactttactcgtgacttatg 63
>RF01062;MIR812;AC025907.2/43108-42938 4530:Oryza sativa (rice)
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
||||||||||| | |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 160 caattttgatctttcgtcttatttgaaatttctttataattagcatttttgttgttataa 101
Query: 100 gatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||| || |||||||||||| | | ||||||||
Sbjct: 100 gatgataaaatataaatagtactttattcgggacttatg 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||| ||| ||||||||||||| ||||
Sbjct: 34 aataagacgaatggtcaaagttggacgcgaaaaa 1
>RF01062;MIR812;AAAA02003808.1/33045-32875 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 4e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 77 aattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
|||||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 124 aattagtatttttgttgttatgagatgatgaaatatgaatagtactttactcgtgactta 65
Query: 137 tg 138
||
Sbjct: 64 tg 63
>RF01062;MIR812;AAAA02017459.1/30794-30625 39946:Oryza sativa Indica
Group
Length = 170
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 155 tttgatcgttcgtcttatttaaaatttttttataattagtatttttgttgttatgagatg 96
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||| ||||||| |||| | ||||||||||
Sbjct: 95 ataaaacataaatagtattttattcgtgacttatg 61
>RF01062;MIR812;AAAA02002407.1/1680-1849 39946:Oryza sativa Indica
Group
Length = 170
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||
Sbjct: 155 tttgatcgtccgttttatttgaaatttttttataattaacatttttgttgttataagatg 96
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
||||||||| |||| ||||||||| || |||||||
Sbjct: 95 ataaaacataaataatactttactcgttacttatg 61
>RF01062;MIR812;AAAA02026120.1/249-420 39946:Oryza sativa Indica
Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 75/87 (86%)
Strand = Plus / Minus
Query: 49 tcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataaa 108
||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct: 152 tcgtctgtcttatttgaaaaaattttataactagcatttttattgttatgagatgataaa 93
Query: 109 acatgaatagtactttacttgtgactt 135
| ||||||||||||||||| |||||||
Sbjct: 92 atatgaatagtactttactcgtgactt 66
>RF01062;MIR812;AACV01007781.1/24830-25001 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||||||||||||||| ||||||| || ||| |||||||| |||||
Sbjct: 156 tttgatcgtccgtcttatttgaattttttttataattaacaatttagttgttataagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| ||||||||| ||||||||||
Sbjct: 96 ataaaacatgaatactactttactcgtgacttatg 62
>RF01062;MIR812;AP003813.4/82612-82446 39947:Oryza sativa Japonica
Group
Length = 167
Score = 91.7 bits (46), Expect = 4e-18
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt-gttgttatga 99
|||||| | |||||||||||||||||| |||||||| |||||| ||||||||||
Sbjct: 155 aattttaaccgtccgtcttatttgaaaattttttataattagtattttttgttgttatga 96
Query: 100 gatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||| |||||||||||||||| ||||||||||
Sbjct: 95 gatgataaaatatgaatagtactttacccgtgacttatg 57
>RF01062;MIR812;AL442103.2/69331-69155 4530:Oryza sativa (rice)
Length = 177
Score = 91.7 bits (46), Expect = 4e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 85 tttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 117 tttttgttgttatgagatgataaaatatgaatagtactttactcgtgacttatg 64
>RF01062;MIR812;AP008212.1/10980126-10979955 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 4e-18
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 48 atcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataa 107
||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||
Sbjct: 153 atcgtccatcttatttgaaaattttttataattactatttttgttgttatgagattataa 94
Query: 108 aacatgaatagtactttacttgtgacttatg 138
||||||||||| |||||||| ||||||||||
Sbjct: 93 aacatgaatagcactttactcgtgacttatg 63
>RF01062;MIR812;AP005175.4/49171-49011 39947:Oryza sativa Japonica
Group
Length = 161
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 77 aattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
|||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 113 aattagtatttttattgttatgatatgataaaacatgaatagtactttactcgtgactta 54
Query: 137 t 137
|
Sbjct: 53 t 53
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||| ||| || |||||| ||||||||||||||
Sbjct: 3 tttccgcgcccaacttcgatcgttcgtcttatttgaaa 40
>RF01062;MIR812;AP003838.3/75445-75617 39947:Oryza sativa Japonica
Group
Length = 173
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 78 attagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 123 attagtatttttgttgttattagatgataaaacatgaatagtactttacgtgtgact 67
>RF01062;MIR812;AACV01014495.1/46718-46548 39947:Oryza sativa
Japonica Group
Length = 171
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 45 ttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatga 104
|||||| ||| |||||||||||| ||||||| |||||||||| ||||||||||
Sbjct: 155 ttgatcatccttcttatttgaaaattttttataattaatatttttgttgctatgagatga 96
Query: 105 taaaacatgaatagtactttacttgtgacttatg 138
|||||||| |||||||||||||| ||||||||||
Sbjct: 95 taaaacataaatagtactttactcgtgacttatg 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
||||||||| ||||||| |||||| |||||||||||||
Sbjct: 1 gtttccgcgtccaattttaatcgtctgtcttatttgaaa 39
>RF01062;MIR812;AACV01008221.1/3287-3126 39947:Oryza sativa Japonica
Group
Length = 162
Score = 89.7 bits (45), Expect = 2e-17
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||| |||||||||||| |||||||| ||||||||| |||| |||||
Sbjct: 147 tttgatcgtctatcttatttgaaatttttttataattagtatttttgttattataagatg 88
Query: 104 ataaaacatgaatagtactttacttgtgacttat 137
|||||| ||||||||||||||||| |||||||||
Sbjct: 87 ataaaatatgaatagtactttactcgtgacttat 54
>RF01062;MIR812;AP008217.1/20259449-20259281 39947:Oryza sativa
Japonica Group
Length = 169
Score = 89.7 bits (45), Expect = 2e-17
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
||||||||||||| ||| |||||||| | |||||||| |||||||||||||| |
Sbjct: 158 caattttgatcgttcgttttatttgatatttttttataattagtatttttgttgttatta 99
Query: 100 gatgataaaacatgaatagtacttta 125
||||||||||||||||||||||||||
Sbjct: 98 gatgataaaacatgaatagtacttta 73
>RF01062;MIR812;AAAA02001058.1/3820-3989 39946:Oryza sativa Indica
Group
Length = 170
Score = 89.7 bits (45), Expect = 2e-17
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||| ||| ||||||||||||||||||||||| |||||||| |||||
Sbjct: 170 gttttcgcgcccaactttgatcgtccgtcttatttgaa--ttttttataattagtatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||| |||||||||||||||||||||| ||||| ||||||
Sbjct: 112 tgttgttataagatgataaaacatgaatagtatcttactcgtgact 67
>RF01062;MIR812;AP004048.3/42552-42381 39947:Oryza sativa Japonica
Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 49 tcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataaa 108
||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 152 tcgtccgtcttatttgaaaattttttataattagtatttttgttgttatgagatgataaa 93
Query: 109 acatgaatagtactttacttgtgacttatg 138
| ||||| || |||||| |||||||||||
Sbjct: 92 atatgaacagcactttatgtgtgacttatg 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||||||||||||||||||||||
Sbjct: 16 tttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02022486.1/26495-26325 39946:Oryza sativa Indica
Group
Length = 171
Score = 89.7 bits (45), Expect = 2e-17
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 48 atcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataa 107
||||||||| |||||||||| |||||||||| |||||||||||| ||||||||
Sbjct: 152 atcgtccgttttatttgaaatttttttataattagcaattttgttgttatacgatgataa 93
Query: 108 aacatgaatagtactttacttgtgac 133
|||||||||||||||||||| |||||
Sbjct: 92 aacatgaatagtactttactcgtgac 67
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||| |||||||||||||||| ||||||
Sbjct: 35 aataagacgaatggttaaagttggacgctgaaaac 1
>RF01062;MIR812;AACV01003622.1/18826-18993 39947:Oryza sativa
Japonica Group
Length = 168
Score = 89.7 bits (45), Expect = 2e-17
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgtt-atgagatgataaaacatgaatagtactttacttgtgac 133
||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 121 ataattaatatttttgttgtttatgagatgataaaacatgaatagtactttactcgtgac 62
Query: 134 ttatg 138
|||||
Sbjct: 61 ttatg 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||| ||| ||||||||||||||||||||
Sbjct: 34 aataagacgtacgattaaagttggacgcggaaaa 1
>RF01062;MIR812;AP008210.1/22033800-22033629 39947:Oryza sativa
Japonica Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||| |||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 157 tttgatcgttcgtcttatttaaaaatttgttataattagtatttttgttgttatgagatg 98
Query: 104 ataaaacatgaatagtacttta 125
||||||||||||| ||||||||
Sbjct: 97 ataaaacatgaatggtacttta 76
>RF01062;MIR812;AACV01016893.1/6094-5925 39947:Oryza sativa Japonica
Group
Length = 170
Score = 89.7 bits (45), Expect = 2e-17
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| |||||| || ||||||||||||| |||||||||| ||||||| |||||
Sbjct: 170 gttttcgcgcttaactttgatcgtccgttttatttgaaaaatttttataattaatatttt 111
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||| ||||| ||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 110 tgtagttataagatgataaaatatgaatagcactttactcgtgacttatg 61
>RF01062;MIR812;AACV01003457.1/7358-7188 39947:Oryza sativa Japonica
Group
Length = 171
Score = 89.7 bits (45), Expect = 2e-17
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| ||||||||||||||| |||||||| |||||| |||||||||||||
Sbjct: 156 tttgatcatccgtcttatttgaactttttttataattagtatttttcttgttatgagatg 97
Query: 104 ataaaacatgaatagtacttta 125
||||||||||||||||||||||
Sbjct: 96 ataaaacatgaatagtacttta 75
>RF01062;MIR812;AAAA02011074.1/102108-101937 39946:Oryza sativa
Indica Group
Length = 172
Score = 89.7 bits (45), Expect = 2e-17
Identities = 93/110 (84%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| |||| |||| ||| ||||||||| |||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgttcaactttaatcgtccgttttatttgaaatttttttataattagtatttt 113
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||| | |||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 112 tgttct-atgagatgataaaacatgaataatactttactcgtgacttatg 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||||||| || | ||||||||||
Sbjct: 35 aataagacgaacggttaaaattaggcgcggaaaac 1
>RF01058;MIR806;AAAA02017693.1/1498-1741 39946:Oryza sativa Indica
Group
Length = 244
Score = 89.7 bits (45), Expect = 2e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaa 66
||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 224 taagtgcagccatgagtttccgcgcacaactttgatcgtccgtcttatttgaa 172
Score = 77.8 bits (39), Expect = 6e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||| |||||||||||||| |||| |||||| ||||||
Sbjct: 143 ataattagtatttttgttgttatgatgtgataaaacatgaaaagtattttactcgtgact 84
Query: 135 tat 137
|||
Sbjct: 83 tat 81
Score = 44.1 bits (22), Expect = 8e-04
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 14 taagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||| ||||||| ||||| | | ||| ||||||||||||| ||||||||||
Sbjct: 21 taagtgtagccatggttttccacacccaactttgatcgtccgttttatttgaaa 74
>RF01062;MIR812;AAAA02030087.1/8995-9151 39946:Oryza sativa Indica
Group
Length = 157
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 113 ataattagtatttttgttgttatgagatgataaaacatgaataatactttatgcgtgact 54
Query: 135 tatg 138
||||
Sbjct: 53 tatg 50
>RF01062;MIR812;AAAA02033303.1/7977-8146 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||| ||| ||||||||||||||||||||||||||||| ||||||| |||| ||||||||
Sbjct: 125 ataaatagtatttttgttgttatgagatgataaaacataaatagtattttatttgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||||||||||||||||||| ||||
Sbjct: 34 aataagacgaacggttaaagttggacgcgaaaaa 1
>RF01062;MIR812;ABRL01001087.1/1141-968 65489:Oryza barthii
Length = 174
Score = 87.7 bits (44), Expect = 6e-17
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||||||||| |||||| ||||||||||| | || |||||||| |||||
Sbjct: 174 gtttccgcgctcaactttgattttccgtcttattcgcaatttttttataattagtatttt 115
Query: 89 tgttgttatgagatgataaaacatgaatagtacttta 125
|||||||||||||||||||||||| ||||||| ||||
Sbjct: 114 tgttgttatgagatgataaaacataaatagtatttta 78
>RF01062;MIR812;AAAA02020840.1/34861-34697 39946:Oryza sativa Indica
Group
Length = 165
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||| ||| ||||| |||||||||||| |||||||||||||| ||||||
Sbjct: 124 ataattagcatttttattgctatgaaatgataaaacataaatagtactttactcgtgact 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
Score = 44.1 bits (22), Expect = 8e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 173 gaacggttaaagttggacgcggaaaa 198
|||||||||||||| |||||||||||
Sbjct: 26 gaacggttaaagttcgacgcggaaaa 1
>RF01062;MIR812;AP003314.3/74968-74797 39947:Oryza sativa Japonica
Group
Length = 172
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||| ||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 127 ataattaatatttttattgttatgagatgataaaacatgaatattactttactcgtgact 68
Query: 135 tatg 138
||||
Sbjct: 67 tatg 64
Score = 44.1 bits (22), Expect = 8e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttatttgaaa 67
|||||||| ||| |||||||||||||| |||||||||
Sbjct: 2 tttccgcgaccaactttgatcgtccgtcatatttgaaa 39
>RF01062;MIR812;AP008213.1/23885583-23885754 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||| | |||||| ||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 126 ataatttgtatttttattgttatgagatgataaaacatgaatagtactttactcgtaact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaa 197
||||||||||||| ||||||||||| |||||||
Sbjct: 139 aataagacgaacgattaaagttggatgcggaaa 171
>RF01062;MIR812;AP008207.1/26364722-26364890 39947:Oryza sativa
Japonica Group
Length = 169
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||| ||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 123 ataattaatatttttattgttataagatgataaaacatgaatagtactttactcgtgact 64
Query: 135 tatg 138
||||
Sbjct: 63 tatg 60
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
|||||||| || ||||||||||||||||||||||
Sbjct: 34 aataagacaaatggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AP008216.1/11453914-11453749 39947:Oryza sativa
Japonica Group
Length = 166
Score = 87.7 bits (44), Expect = 6e-17
Identities = 84/98 (85%), Gaps = 5/98 (5%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
|||||||||||||| ||||||||||||| |||||||| ||||||||||||||||
Sbjct: 155 caattttgatcgtctgtcttatttgaaatt-----ataattagtatttttgttgttatga 101
Query: 100 gatgataaaacatgaatagtactttacttgtgacttat 137
||| ||||||||| ||| ||| |||||| |||||||||
Sbjct: 100 gataataaaacataaatcgtattttactcgtgacttat 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaa 67
||||||||||||||||||||||||
Sbjct: 16 tttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02011639.1/2411-2241 39946:Oryza sativa Indica
Group
Length = 171
Score = 87.7 bits (44), Expect = 6e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||
Sbjct: 126 ataattagtatttttgttgttatgagatgataaaacatgaat-gtaatttactcgtgact 68
Query: 135 tatg 138
||||
Sbjct: 67 tatg 64
>RF01062;MIR812;AACV01013049.1/7941-7785 39947:Oryza sativa Japonica
Group
Length = 157
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||| || |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 113 ataattaatatttttattattatgagatgataaaacatgaatagtactttactcgtgact 54
Query: 135 tatg 138
||||
Sbjct: 53 tatg 50
>RF01062;MIR812;AL845342.2/104516-104684 4530:Oryza sativa (rice)
Length = 169
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 124 ataattagtatttttgttgttatgagatgataaaacataaatagtactttatgtgtgtct 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
>RF01062;MIR812;AAAA02011089.1/84707-84876 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||| | |||||||||| |||||||||||||||||||||||||| |||||| ||||||
Sbjct: 124 ataatttgtatttttgttgctatgagatgataaaacatgaatagtattttactcgtgact 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
>RF01062;MIR812;AP008208.1/18863983-18864152 39947:Oryza sativa
Japonica Group
Length = 170
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||||||||||||||||||||||||||| ||||| |||| |
Sbjct: 124 ataattagtatttttattgttatgagatgataaaacatgaatagtacattactcgtgatt 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||| ||| ||||| ||||||||||||||||||
Sbjct: 34 aataaaacggacggtcaaagttggacgcggaaaa 1
>RF01062;MIR812;AC133008.3/46362-46533 39947:Oryza sativa Japonica
Group
Length = 172
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 127 ataattagtatttttattgctatgagatgataaaacatgaatagtactttatatgtgact 68
Query: 135 tatg 138
||||
Sbjct: 67 tatg 64
>RF01062;MIR812;AP008208.1/2764819-2764990 39947:Oryza sativa
Japonica Group
Length = 172
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 126 ataattaatatttttattgttatgagatgataaaacatggatagtactttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
Score = 48.1 bits (24), Expect = 5e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 40 caattttgatcgtccgtcttatttgaaa 67
||||||||| ||||||||||||||||||
Sbjct: 12 caattttgaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AP004161.3/106159-105991 39947:Oryza sativa Japonica
Group
Length = 169
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 124 ataattagtatatttgttgttatgagatgataaaatatgaataatactttactcgtgact 65
Query: 135 tatg 138
||||
Sbjct: 64 tatg 61
>RF01062;MIR812;AACV01020608.1/2962-2801 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 41 aattttgatcgtccgtcttatttgaaannnnnnnataattagcattttt-gttgttatga 99
||||||||| ||||||||||||||||| |||||||| |||||| |||||| |||
Sbjct: 150 aattttgattgtccgtcttatttgaaatttttttataattagtatttttcgttgttgtga 91
Query: 100 gatgataaaacatgaatagtactttacttgtgactta 136
||| ||||||||||||||||| |||||| ||||||||
Sbjct: 90 gatcataaaacatgaatagtaatttactcgtgactta 54
>RF01062;MIR812;AAAA02032780.1/1765-1595 39946:Oryza sativa Indica
Group
Length = 171
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||| ||||||
Sbjct: 126 ataattagcatttttgttgttataagatgataaaatatggatagtgctttactcgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;AP008211.1/24592306-24592476 39947:Oryza sativa
Japonica Group
Length = 171
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||| ||||||||||||||||||||||||||| || |||||| ||||||
Sbjct: 125 ataattagtatttttattgttatgagatgataaaacatgaataataatttactcgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
>RF01062;MIR812;AAAA02011210.1/47142-47314 39946:Oryza sativa Indica
Group
Length = 173
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||| ||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 127 ataaatagcatttttgttattataagatgataaaacatgaataatactttactcgtgact 68
Query: 135 tatg 138
||||
Sbjct: 67 tatg 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||| |||||||||||| ||| ||||||
Sbjct: 35 aataagacgaatggttaaagttgggcgctgaaaac 1
>RF01062;MIR812;AACV01020326.1/8104-8266 39947:Oryza sativa Japonica
Group
Length = 163
Score = 87.7 bits (44), Expect = 6e-17
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct: 147 tttgatcgtccgtcttatttgaaatttttttataattagtacttttgttgttatgagatg 88
Query: 104 ataaaacatgaatagtactttactt 128
|||||| ||||| |||||||||||
Sbjct: 87 ataaaatatgaacggtactttactt 63
>RF01062;MIR812;AP003871.3/137479-137311 39947:Oryza sativa Japonica
Group
Length = 169
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 123 ataattaatatttttgttgttatgagatcataaaacatgaatagtactttactcatgact 64
Query: 135 tatg 138
||||
Sbjct: 63 tatg 60
>RF01062;MIR812;AAAA02007218.1/82249-82418 39946:Oryza sativa Indica
Group
Length = 170
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||
Sbjct: 125 ataattaatatttttgttgttatgagatgataaaacatgaataatactttattcgtgact 66
Query: 135 tatg 138
||||
Sbjct: 65 tatg 62
>RF01062;MIR812;AACV01003947.1/10244-10083 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 6e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 87 tttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 106 tttgttgttatgagataataaaacatgaatagtactttactcgtgacttatg 55
Score = 54.0 bits (27), Expect = 9e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||| | |||||||||||||||||||
Sbjct: 35 aataagacgaacgatcaaagttggacgcggaaaac 1
>RF01062;MIR812;AP008212.1/4420719-4420549 39947:Oryza sativa
Japonica Group
Length = 171
Score = 87.7 bits (44), Expect = 6e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||
Sbjct: 126 ataattagtatttttgttgttatgagataataaaacatgaataatactttatgtgtgact 67
Query: 135 tatg 138
||||
Sbjct: 66 tatg 63
>RF01062;MIR812;ABRL01002073.1/6466-6304 65489:Oryza barthii
Length = 163
Score = 85.7 bits (43), Expect = 2e-16
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||||||| ||||| ||| ||||| |||||||||| ||| ||||||| |||||
Sbjct: 163 gtttccgcactcaactttaatcgttcgtcttatttaaaattattttataattaatatttt 104
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
| ||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 103 tattgttataagatgataaaatatgaatagtactttactcgtgactta 56
>RF01062;MIR812;AAAA02007619.1/8763-8592 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 76 taattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactt 135
||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 124 taattagtatttttgttgttatgagatgataaaatatgaatagcactttatgtgtgactt 65
Query: 136 atg 138
|||
Sbjct: 64 atg 62
>RF01062;MIR812;AAAA02003779.1/37338-37509 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 76 taattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactt 135
||||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||||||
Sbjct: 125 taattagtatttttgttgttacgagatgataaaatatgaatagtactttatgtgtgactt 66
Query: 136 atg 138
|||
Sbjct: 65 atg 63
>RF01062;MIR812;AAAA02008720.1/621-453 39946:Oryza sativa Indica
Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||| ||||||||||||||||||||||| ||||||||| || |||
Sbjct: 124 ataattagtatttttgttgctatgagatgataaaacatgaataatactttactcgtaact 65
Query: 135 tat 137
|||
Sbjct: 64 tat 62
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||| ||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 109 atttttattgttatgagatgataaaacatgaatagtactttattcgtgacttatg 55
>RF01062;MIR812;AACV01012162.1/3304-3133 39947:Oryza sativa Japonica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 79 ttagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
|||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 122 ttagtatttttgttgctatgagatgataaaacatgaataatactttatttgtgacttat 64
>RF01062;MIR812;AAAA02007810.1/5543-5371 39946:Oryza sativa Indica
Group
Length = 173
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcattttt-gttgttatgagat 102
|||||||||||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 158 tttgatcgtccgtcttatttgaaatttttttataattagcattttttgttgttataagat 99
Query: 103 gataaaacatgaatagtactttacttgtgacttatg 138
||||||| | ||||| |||||||| ||||||||||
Sbjct: 98 gataaaataagaataatactttaccagtgacttatg 63
>RF01062;MIR812;AP003338.3/4697-4870 39947:Oryza sativa Japonica
Group
Length = 174
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||| ||
Sbjct: 127 ataattagtatttttgttgttacgagatgataaaatatgaatagtactttactcgtggct 68
Query: 135 tat 137
|||
Sbjct: 67 tat 65
>RF01062;MIR812;AACV01020215.1/2730-2899 39947:Oryza sativa Japonica
Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||| ||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 158 tttgatcgttcgtattatttgaaatttttttataattagtatttttgttgttatgagatg 99
Query: 104 ataaaacatgaatagtactttact 127
|||||||||||| | |||||||||
Sbjct: 98 ataaaacatgaagaatactttact 75
>RF01062;MIR812;AL606626.3/62894-63049 39947:Oryza sativa Japonica
Group
Length = 156
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtacttta 125
|||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110 ataattagtatttttgttgttatgagatgataaaatatgaatagtacttta 60
>RF01062;MIR812;AAAA02020057.1/3907-4081 39946:Oryza sativa Indica
Group
Length = 175
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| ||||||||| |||||||||||||||| || ||||||||||||||| |||||
Sbjct: 129 ataattagtatttttgttattatgagatgataaaatataaatagtactttacttatgact 70
Query: 135 tat 137
|||
Sbjct: 69 tat 67
>RF01062;MIR812;AAAA02000365.1/28299-28472 39946:Oryza sativa Indica
Group
Length = 174
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 78 attagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 123 attagtatttttgttgttattagatgataaaacatgaatagtactttatgtgtgactta 65
>RF01062;MIR812;AP004998.2/55548-55721 39947:Oryza sativa Japonica
Group
Length = 174
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||| ||||| |||||||||| |||||||||||||||||||| |||| |||
Sbjct: 158 tttgatcatccgttttatttgaaatttttttataattagcatttttgttgtcatgaaatg 99
Query: 104 ataaaacatgaatagtacttta-cttgtgacttatg 138
|||||| ||||||||||||||| || ||||||||||
Sbjct: 98 ataaaatatgaatagtactttacctcgtgacttatg 63
Score = 61.9 bits (31), Expect = 4e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaac 199
||||||||||||||| |||||||||||||||||||
Sbjct: 35 aataagacgaacggtcaaagttggacgcggaaaac 1
>RF01062;MIR812;AP008209.1/26520610-26520441 39947:Oryza sativa
Japonica Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
|||||||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct: 125 ataattagtatttttgttgttatgagatgat-aaacatgaatagtaatttactcgtgact 67
Query: 135 tat 137
|||
Sbjct: 66 tat 64
>RF01062;MIR812;AP008208.1/13044189-13044045 39947:Oryza sativa
Japonica Group
Length = 145
Score = 85.7 bits (43), Expect = 2e-16
Identities = 81/96 (84%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||| || ||| ||||||||||||||||||||||| ||||||| |||||
Sbjct: 145 gtttccgtgcccaactttgatcgtccgtcttatttgaattttttttataattattatttt 86
Query: 89 tgttgttatgagatgataaaacatgaatagtacttt 124
| ||||||||||||||||||| ||||||||||||||
Sbjct: 85 tattgttatgagatgataaaatatgaatagtacttt 50
>RF01062;MIR812;AC078977.6/110867-111034 39947:Oryza sativa Japonica
Group
Length = 168
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 76 taattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgact 134
||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||||
Sbjct: 122 taattagtatttttgttgttattagatgataaaacataaatagtactttatttgtgact 64
>RF01062;MIR812;AAAA02008040.1/12102-12272 39946:Oryza sativa Indica
Group
Length = 171
Score = 83.8 bits (42), Expect = 1e-15
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||||||||||| |||||||||| |||||||| | |||| || |||| |||||
Sbjct: 156 tttgatcgtccgttttatttgaaatttttttataattagtagttttattattataagatg 97
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||||||||||| |||||||||||
Sbjct: 96 ataaaacatgaatagtactttatatgtgacttatg 62
>RF01062;MIR812;AP008218.1/17839972-17840145 39947:Oryza sativa
Japonica Group
Length = 174
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 85 tttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||| |||||||||| |||||| ||||||||||
Sbjct: 115 tttttgttgttatgagatgataaaagatgaatagtattttactcgtgacttatg 62
>RF01062;MIR812;AACV01025243.1/4967-4799 39947:Oryza sativa Japonica
Group
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||||||||||||||||| || ||||| |||||| ||||||| ||||
Sbjct: 154 tttgatcgtccgtcttatttgaaatgtttttatgattagtatttttattgttattagata 95
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||||| ||||||| |||||||||||
Sbjct: 94 ataaaacatgaataatactttatgtgtgacttatg 60
>RF01062;MIR812;AACV01025420.1/209-362 39947:Oryza sativa Japonica
Group
Length = 154
Score = 83.8 bits (42), Expect = 1e-15
Identities = 80/95 (84%)
Strand = Plus / Minus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
|||||||||| ||||||||| ||| |||||||| |||||| |||||||||||||
Sbjct: 139 tttgatcgtctgtcttatttaaaatttttttataattagtatttttattgttatgagatg 80
Query: 104 ataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||| ||| |||||| ||||||||||
Sbjct: 79 ataaaacatgaacagttttttactcgtgacttatg 45
>RF01062;MIR812;AAAA02004256.1/11499-11667 39946:Oryza sativa Indica
Group
Length = 169
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 78 attagcatttttgttgttatgagatgataaaacatgaatagtactttact 127
||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 120 attagtatttttattgttatgagatgataaaacatgaatagtactttact 71
>RF01062;MIR812;AP002541.2/74846-75005 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 1e-15
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
||||||||||||| |||||||||| ||| |||||||| ||||||||| ||||||
Sbjct: 149 caattttgatcgttcgtcttatttaaaagttttttataattagtatttttgttattatga 90
Query: 100 gatgataaaacatgaatagtactttacttgtgacttatg 138
|| ||||||| |||||||| |||||||| |||| |||||
Sbjct: 89 gaggataaaatatgaatagcactttactcgtgatttatg 51
>RF01062;MIR812;AAAA02030633.1/590-759 39946:Oryza sativa Indica
Group
Length = 170
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 77 aattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtgactta 136
|||||| |||||| ||||||||||||||||||| |||||||||| ||||||| |||||||
Sbjct: 123 aattagtatttttcttgttatgagatgataaaatatgaatagtaatttacttatgactta 64
Query: 137 tg 138
||
Sbjct: 63 tg 62
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 30 tttccgcgctcaattttgatcgtccgtcttattt 63
|||||||| |||||||||||||| |||||||||
Sbjct: 3 tttccgcgtccaattttgatcgtctgtcttattt 36
>RF01062;MIR812;AAAA02014561.1/49583-49410 39946:Oryza sativa Indica
Group
Length = 174
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 85 tttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||| || ||||||||||||||||| |||||||
Sbjct: 117 tttttgttgttatgagatgataaaatattaatagtactttacttgttacttatg 64
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 166 ataagacgaacggttaaagttggacgcggaaaac 199
|||||||| ||| ||||||||||||| |||||||
Sbjct: 34 ataagacggacgattaaagttggacggggaaaac 1
>RF01062;MIR812;AP008207.1/13799987-13800152 39947:Oryza sativa
Japonica Group
Length = 166
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 84 atttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttat 137
||||||||| |||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 112 atttttgttattatgagatggtaaaacatgaatagtactttactcgtgacttat 59
Score = 44.1 bits (22), Expect = 8e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 165 aataagacgaacggttaaagttggacgcggaaaa 198
||||||||||||||||||| || | |||||||||
Sbjct: 34 aataagacgaacggttaaaattaggcgcggaaaa 1
>RF01062;MIR812;AAAA02014067.1/20261-20090 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 85 tttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
|||||||||||| |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 115 tttttgttgttacgagaggataaaacatgaacagtactttacttgtgacttatg 62
>RF01062;MIR812;AP001366.1/19470-19642 39947:Oryza sativa Japonica
Group
Length = 173
Score = 83.8 bits (42), Expect = 1e-15
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 48 atcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatgataa 107
|||||||||||||||||||| ||||||| ||||||||| ||||||||||||||
Sbjct: 154 atcgtccgtcttatttgaaatttttttataattaatatttttgttattatgagatgataa 95
Query: 108 aacatgaatagtactttacttgtgacttatg 138
||||||| |||||||||| ||||||||||
Sbjct: 94 aacatgagtagtactttatgcgtgacttatg 64
>RF01062;MIR812;AAAA02034548.1/4926-4743 39946:Oryza sativa Indica
Group
Length = 184
Score = 83.8 bits (42), Expect = 1e-15
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 85 tttttgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||||||||||||||||||||||||| | |||||||||||| |||||
Sbjct: 115 tttttgttgttatgagatgataaaacatgaataatcctttacttgtgatttatg 62
>RF01062;MIR812;CR855167.1/66190-66024 4530:Oryza sativa (rice)
Length = 167
Score = 83.8 bits (42), Expect = 1e-15
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 40 caattttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatga 99
|||||||||||||||||||||||| || |||||||| |||||| ||||||| |
Sbjct: 156 caattttgatcgtccgtcttattttaa-tttttttataattagtatttttattgttataa 98
Query: 100 gatgataaaacatgaatagtactttacttgtgacttatg 138
||| |||||||||||||||||||||| |||||||||||
Sbjct: 97 gattataaaacatgaatagtactttatgtgtgacttatg 59
>RF01058;MIR806;AAAA02032712.1/19270-19031 39946:Oryza sativa Indica
Group
Length = 240
Score = 83.8 bits (42), Expect = 1e-15
Identities = 104/127 (81%)
Strand = Plus / Plus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaaannnn 71
|||||| ||| |||||||||||| | ||||||||| ||||||||||||||||||
Sbjct: 19 aataagcgcaaccatgagtttccatgtccaattttgaccgtccgtcttatttgaaattat 78
Query: 72 nnnataattagcatttttgttgttatgagatgataaaacatgaatagtactttacttgtg 131
|| ||||| |||||| ||||||| || | |||||||||||| |||||||||| |||
Sbjct: 79 tttatgattagtatttttattgttattaggttataaaacatgaaaagtactttacgcgtg 138
Query: 132 acttatg 138
|||||||
Sbjct: 139 acttatg 145
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 165 aataagacgaacggttaaagttggacgcggaaaaccatggctacacttattttg 218
||||||||||||| |||||||||||| |||||| ||||||| | |||||||||
Sbjct: 172 aataagacgaacgattaaagttggacacggaaactcatggctgcgcttattttg 225
Score = 54.0 bits (27), Expect = 9e-07
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 12 aataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttatttgaa 66
|||||| ||||||||||||||||| | ||| ||| ||||| |||||||||||||
Sbjct: 222 aataagcgcagccatgagtttccgtgtccaactttaatcgttcgtcttatttgaa 168
>RF01058;MIR806;AAAA02012959.1/2038-1794 39946:Oryza sativa Indica
Group
Length = 245
Score = 83.8 bits (42), Expect = 1e-15
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 44 tttgatcgtccgtcttatttgaaannnnnnnataattagcatttttgttgttatgagatg 103
||||| |||||||||||||||||| || ||||| |||||||||| ||| |||||
Sbjct: 53 tttgaccgtccgtcttatttgaaaattttttatgattagtatttttgttgctattagatg 112
Query: 104 ataaaacatgaatagtactttacttgtgact 134
|||||||||||||||||||||| |||||||
Sbjct: 113 ataaaacatgaatagtactttatgtgtgact 143
>RF01062;MIR812;AAAA02022482.1/14123-14291 39946:Oryza sativa Indica
Group
Length = 169
Score = 81.8 bits (41), Expect = 4e-15
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
||||||| ||| || ||| ||||| ||| |||||||||| ||||||| |||||
Sbjct: 169 gtttccgtgcttaactttaatcgttcgttttatttgaaaaaaatttataattaatatttt 110
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||| ||| |||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 109 tgtagttgtgagatgataaaacatgaatagcactttacttatgacttatg 60
>RF01062;MIR812;AAAA02025560.1/18144-18312 39946:Oryza sativa Indica
Group
Length = 169
Score = 81.8 bits (41), Expect = 4e-15
Identities = 51/53 (96%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgagatgataaaacatgaatagtactttact 127
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 124 ataattagcatttt-gttgttatgagatgataaaacatgaatagtattttact 73
>RF01062;MIR812;AACV01017236.1/11638-11467 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 4e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 75 ataattagcatttttgttgttatgag-atgataaaacatgaatagtactttacttgtgac 133
|||||||| |||||||||||||| || ||||||||| ||||||||||||||||| |||||
Sbjct: 127 ataattaggatttttgttgttataaggatgataaaagatgaatagtactttactggtgac 68
Query: 134 ttatg 138
|||||
Sbjct: 67 ttatg 63
>RF01062;MIR812;AP008218.1/20042680-20042512 39947:Oryza sativa
Japonica Group
Length = 169
Score = 81.8 bits (41), Expect = 4e-15
Identities = 92/110 (83%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 29 gtttccgcgctcaattttgatcgtccgtcttatttgaaannnnnnnataattagcatttt 88
|||| ||||||||| ||| ||||||| |||||||| ||| |||||||| || ||
Sbjct: 169 gttttcgcgctcaacttttatcgtccatcttattt-aaatttttttataattagtatatt 111
Query: 89 tgttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 138
||||||||||| ||||||||| || |||||||||||||| ||||||||||
Sbjct: 110 tgttgttatgaaatgataaaatataaatagtactttactcgtgacttatg 61
