miRNEST 2.0, an integrative microRNA resource :: BLAST
>49054_osa-miR812g:pmrd
Length = 242
Score = 79.8 bits (40), Expect = 7e-16
Identities = 62/67 (92%), Gaps = 3/67 (4%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatag--tactttactcgtg 112
||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 158 ataattagtattttta-ttgttatgagataataaaatatgaatagtatactttactcatg 100
Query: 113 acttatg 119
|||||||
Sbjct: 99 acttatg 93
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttattt 43
||||| ||||||| ||||||||||||||||
Sbjct: 48 cgcgctcaactttaatcgtccgtcttattt 77
>49057_osa-miR812j:pmrd
Length = 297
Score = 63.9 bits (32), Expect = 4e-11
Identities = 89/109 (81%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||||| | |||||||| ||| |||||||||||||||| || ||||||| ||
Sbjct: 231 agtttccgtgtccaactttaatcatccgtcttatttgaaatttttgtatgattagta-tt 173
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||| ||||||| |||| |||||| |||||||||| |||| ||||||||
Sbjct: 172 tttattgttattagattataaaacatgaatagtagtttatgcgtgactt 124
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggac 172
|||||||||||||| ||||||||||||
Sbjct: 95 taaataagacgaacaattaaagttggac 68
>49052_osa-miR812e:pmrd
Length = 170
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 17 gcccaactttgatcgtccgtcttatttgaaa 47
|||||||||||| ||||||||||||||||||
Sbjct: 9 gcccaactttgaccgtccgtcttatttgaaa 39
Score = 40.1 bits (20), Expect = 6e-04
Identities = 33/36 (91%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaa-gttggacgcggaaa 179
||||||||||| ||||||||| ||||||| ||||||
Sbjct: 134 taaataagacggacggttaaacgttggacacggaaa 169
>49049_osa-miR812b:pmrd
Length = 170
Score = 50.1 bits (25), Expect = 6e-07
Identities = 70/86 (81%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 30 cgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagataataaa 89
|||||||||||||||||| || ||||||| ||||| ||||||| |||| |||||
Sbjct: 148 cgtccgtcttatttgaaaatttttaatgattagta-tttttattgttattagatgataaa 90
Query: 90 atatgaatagtactttactcgtgact 115
| ||||||| ||||||| |||||||
Sbjct: 89 acatgaatattactttatgcgtgact 64
>48793_obt-miR812:pmrd
Length = 175
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtacttta 106
||||| ||||||| |||| |||||| |||||||||||||||
Sbjct: 118 tttttattgttattagatgataaaacatgaatagtacttta 78
>50829_osa-miRf11614-akr:pmrd
Length = 179
Score = 46.1 bits (23), Expect = 1e-05
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaac-tttgatcgtccgtcttatttgaaa 47
|||||| ||||||| ||||| ||||||||||||||||||
Sbjct: 173 tttccgtgcccaacgtttgaccgtccgtcttatttgaaa 135
>50576_osa-miRf11361-akr:pmrd
Length = 179
Score = 42.1 bits (21), Expect = 1e-04
Identities = 56/66 (84%), Gaps = 5/66 (7%)
Strand = Plus / Plus
Query: 55 ataattagtatttt--ttgttgttatgagataataaaatatgaatagtactttactcgtg 112
|||||||||||||| ||||||||| ||| ||||||||||| || ||||||| ||||
Sbjct: 51 ataattagtattttcattgttgtta---gatgataaaatatgattaatactttatgcgtg 107
Query: 113 acttat 118
||||||
Sbjct: 108 acttat 113
>51120_osa-miRf11905-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 157 tttgaccgtccgtcttatttgaaa 134
>50654_osa-miRf11439-akr:pmrd
Length = 173
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 156 tttgaccgtccgtcttatttgaaa 133
>50624_osa-miRf11409-akr:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 148 tttgaccgtccgtcttatttgaaa 125
>50479_osa-miRf11264-akr:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 54/64 (84%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
|||||||||| |||| |||||| | |||| |||||| |||| || ||||||| ||||||
Sbjct: 48 ataattagta-ttttcgttgttgttagatgataaaaaatgattaatactttatgcgtgac 106
Query: 115 ttat 118
||||
Sbjct: 107 ttat 110
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 158 tttgaccgtccgtcttatttgaaa 135
>50423_osa-miRf11208-akr:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 158 tttgaccgtccgtcttatttgaaa 135
>50253_osa-miRf11038-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 155 tttgaccgtccgtcttatttgaaa 132
>50252_osa-miRf11037-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 155 tttgaccgtccgtcttatttgaaa 132
>50251_osa-miRf11036-akr:pmrd
Length = 179
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||| ||||||||||||||||||
Sbjct: 159 tttgaccgtccgtcttatttgaaa 136
>49875_osa-miRf10660-akr:pmrd
Length = 191
Score = 40.1 bits (20), Expect = 6e-04
Identities = 54/64 (84%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
|||||||||| ||||| ||||| | |||| |||||| |||| || ||||||| ||||||
Sbjct: 62 ataattagta-tttttattgttgttagatgataaaacatgattaatactttatgcgtgac 120
Query: 115 ttat 118
||||
Sbjct: 121 ttat 124
>49048_osa-miR812a:pmrd
Length = 234
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||||||| ||||||||||||||
Sbjct: 48 tttgatcgttcgtcttatttgaaa 71
>48800_oru-miR812:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaa 165
||||||||||||||||||||
Sbjct: 139 aaataagacgaacggttaaa 158
>48792_obr-miR812:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 24 tttgatcgtccgtcttatttgaaa 47
||||||| ||||||||||||||||
Sbjct: 17 tttgatcatccgtcttatttgaaa 40
