miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF01058;MIR806;AP005542.3/3261-3021 39947:Oryza sativa Japonica
Group
Length = 241
Score = 133 bits (67), Expect = 1e-30
Identities = 100/112 (89%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 35 agtttccgcgtccaactttgatcgtccgtcttatttgaattttttttataattagtattt 94
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 95 ttt-ttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 145
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 tttccgcgcccaactttgatcgtccatcttatttgaaa 168
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||||||| ||| | |||||||||||||||||
Sbjct: 70 aaataagacggacgatcaaagttggacgcggaaa 37
>RF01062;MIR812;AAAA02043709.1/2181-2021 39946:Oryza sativa Indica
Group
Length = 161
Score = 127 bits (64), Expect = 6e-29
Identities = 93/105 (88%)
Strand = Plus / Minus
Query: 15 gcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttg 74
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 155 gcgcccaattttgatcgtccgtcttatttgaaatttttttataattagtattttttgttg 96
Query: 75 ttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| ||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 95 ttatgtgatgataaaacatgaatagtgctttactcgtgacttatg 51
>RF01062;MIR812;AC129226.2/34668-34840 39947:Oryza sativa Japonica
Group
Length = 173
Score = 125 bits (63), Expect = 2e-28
Identities = 90/100 (90%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 160 caactttgatcgtccgtcttatttgaaaaaattttataattagtattttt-gttgttacg 102
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||||||| |||||||||||||||||
Sbjct: 101 agataataaaatatgaatagtattttactcgtgacttatg 62
>RF01058;MIR806;AP004279.1/119207-118967 39947:Oryza sativa Japonica
Group
Length = 241
Score = 125 bits (63), Expect = 2e-28
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 4 cataagtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagt 63
||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 31 cataagtttccgcgcttaactttgatcgtccgtcttatttgaaatttttttataattagc 90
Query: 64 attttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| ||||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 91 atttt-tgttgttataagatgataaaacatgaatagtactttactcgtgacttatg 145
>RF01058;MIR806;AAAA02034839.1/3524-3764 39946:Oryza sativa Indica
Group
Length = 241
Score = 125 bits (63), Expect = 2e-28
Identities = 102/116 (87%), Gaps = 1/116 (0%)
Strand = Plus / Plus
Query: 4 cataagtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagt 63
|||||||||||| ||||| |||||||||||||||||||||||| |||||||||
Sbjct: 31 cataagtttccgtacccaattttgatcgtccgtcttatttgaaatttttttataattagt 90
Query: 64 attttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 91 atttt-tgttgttatgagatgataaaacataaatagtactttactcgtgacttatg 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
||||| || |||||| ||||||||||||||||||
Sbjct: 201 cgcgcacatctttgaccgtccgtcttatttgaaa 168
>RF01062;MIR812;AAAA02014084.1/6055-5884 39946:Oryza sativa Indica
Group
Length = 172
Score = 123 bits (62), Expect = 9e-28
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||||| ||||||||||| |||||||||| ||| ||||||| ||||||
Sbjct: 172 gtttccgcgccccactttgatcgttcgtcttatttaaaaattttgtataattaatatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 112 t-gttgttatgagataataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AAAA02010797.1/10823-10993 39946:Oryza sativa Indica
Group
Length = 171
Score = 123 bits (62), Expect = 9e-28
Identities = 98/111 (88%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| |||| |||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 171 gttttcgcgtccaactttgatcgtccgttttatttgaaaaaattatataattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 111 t-gttgttatgagatgataaaatatgaatagtactttacttgtgacttatg 62
>RF01062;MIR812;AAAA02019804.1/47754-47923 39946:Oryza sativa Indica
Group
Length = 170
Score = 121 bits (61), Expect = 4e-27
Identities = 94/106 (88%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 13 ccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgt 72
|||||||||||||| |||||||||||||||| ||| ||||||||||||||| ||
Sbjct: 166 ccgcgcccaactttaatcgtccgtcttattttaaatttttttataattagtattttt-gt 108
Query: 73 tgttatgagataataaaatatgaatagtactttactcgtgacttat 118
||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 107 tgttatgagatgataaaatatgaatagtattttactcgtgacttat 62
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||| ||||||||||||||||||||||||
Sbjct: 36 taaataagacggacggttaaagttggacgcggaaaa 1
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| |||||||| | ||||||||||||||
Sbjct: 2 tttccgcgtccaactttaaccgtccgtcttattt 35
>RF01062;MIR812;AP003813.4/82612-82446 39947:Oryza sativa Japonica
Group
Length = 167
Score = 121 bits (61), Expect = 4e-27
Identities = 81/90 (90%)
Strand = Plus / Minus
Query: 30 cgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagataataaa 89
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 146 cgtccgtcttatttgaaaattttttataattagtattttttgttgttatgagatgataaa 87
Query: 90 atatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||||||||
Sbjct: 86 atatgaatagtactttacccgtgacttatg 57
>RF01062;MIR812;AAHK01024291.1/515-686 5693:Trypanosoma cruzi
Length = 172
Score = 121 bits (61), Expect = 4e-27
Identities = 97/110 (88%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 170 tttccgcgctcaactttgatcgtccgtcttatttaaaattattttataattagcattttt 111
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 110 -gttgttataagataataaaacatgaatagtactttactcgtgacttatg 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttga 45
||||||||||||||||||| ||| ||| ||||||||
Sbjct: 3 tttccgcgcccaactttgaccgttcgtattatttga 38
>RF01062;MIR812;AACV01008873.1/15378-15551 39947:Oryza sativa
Japonica Group
Length = 174
Score = 117 bits (59), Expect = 6e-26
Identities = 98/112 (87%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||
Sbjct: 174 agtttcagcgcccaactttgatcgtccgtcttatttaaaatttttttataattagtaatt 115
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| |||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 114 tt-gttgttataagatgataaaatatgaatactactttactcgtgacttatg 64
>RF01058;MIR806;CR855233.1/33445-33205 4530:Oryza sativa (rice)
Length = 241
Score = 117 bits (59), Expect = 6e-26
Identities = 98/112 (87%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||||| | |||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 35 agtttccgtgtccaattttgatcgtccgtcttatttgaaaactttttataattagtattt 94
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 95 t-tgttgttatgagatgataaaacatgaatagtattttactcgtgacttatg 145
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaa 46
|||||||||||||||||||||||||||||||||
Sbjct: 201 cgcgcccaactttgatcgtccgtcttatttgaa 169
>RF01062;MIR812;ABRL01002014.1/3171-3001 65489:Oryza barthii
Length = 171
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| |||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 171 agtttctgcgctcaactttgatcgtccgtcttatttgaaatttttgtataattagtattt 112
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
|| ||||||||||||| |||||| || |||||||||||||||| |||||||
Sbjct: 111 tt-gttgttatgagatgataaaacataaatagtactttactcgggacttat 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 17 gcccaactttgatcgtccgtcttatttgaaa 47
|||||| |||||| |||||||||||||||||
Sbjct: 10 gcccaattttgattgtccgtcttatttgaaa 40
>RF01062;MIR812;AP008208.1/22478382-22478209 39947:Oryza sativa
Japonica Group
Length = 174
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| ||| |||||||||||||||||||||||| ||| |||||||| |||||
Sbjct: 174 gtttccacgctcaactttgatcgtccgtcttatttaaaatttttttataattagcatttt 115
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 114 t-gttgttatgagataataaaatataaatagtattttactcgtgacttatg 65
>RF01062;MIR812;AP008212.1/25992082-25992255 39947:Oryza sativa
Japonica Group
Length = 174
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||||||||||||||||| ||||||||||||| ||||||| | |||
Sbjct: 174 gtttccgcgcccaactttgatcgtctgtcttatttgaaatttttttataattaacaattt 115
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 114 t-gttgttataagatgataaaatatgaatagtactttactcgtgacttatg 65
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||| |||||||||||||| | | ||||||||||||||
Sbjct: 3 tttcagcgcccaactttgaccattcgtcttatttgaaa 40
>RF01062;MIR812;AY946442.1/200-29 4530:Oryza sativa (rice)
Length = 172
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||||||||| ||||||||||||||||| ||| ||||||| | |||
Sbjct: 172 gtttccgcgcccaacttcgatcgtccgtcttatttaaaaaaaatttataattaaca-ttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 113 ttgttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaa 46
||||| ||||||||||||| ||| |||||||||||||
Sbjct: 3 tttccacgcccaactttgaccgttcgtcttatttgaa 39
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||| |||||||| || |||||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcgtggaaaac 1
>RF01062;MIR812;AP008214.1/8842812-8842970 39947:Oryza sativa
Japonica Group
Length = 159
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||| || |||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 159 gtttccgcacctaactttgatcatccgtcttatttgaaaaaattttataattagtatttt 100
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||||||||||| || |||||||||||| ||||||||||||
Sbjct: 99 t-gttgttatgagataataaaacataaatagtactttattcgtgacttatg 50
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| |||||||||| |||||||||||||
Sbjct: 2 tttccgcgaccaactttgactgtccgtcttattt 35
>RF01062;MIR812;AC133339.3/154381-154211 39947:Oryza sativa Japonica
Group
Length = 171
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| ||| ||||||||||||||| |||||||||||| |||||||||| |||
Sbjct: 171 gtttccacgctcaactttgatcgtccatcttatttgaaaattttttataattagtacttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 111 t-gttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02004388.1/22484-22653 39946:Oryza sativa Indica
Group
Length = 170
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||| ||| |||||||||||||||||||||||| |||||||| |||||
Sbjct: 170 gtttccgcgctcaattttgatcgtccgtcttatttgaaatttttttataattagcatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 110 t-gttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 61
Score = 67.9 bits (34), Expect = 5e-11
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 147 aataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||||||||||||||
Sbjct: 34 aataagacgaacggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AAAA02017193.1/13592-13421 39946:Oryza sativa Indica
Group
Length = 172
Score = 115 bits (58), Expect = 2e-25
Identities = 94/107 (87%), Gaps = 1/107 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 172 gtttccgcgcccaactttgatcgtccgtcttatttgaaatttttttataattagta-ttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgact 115
|||||||||| |||| |||||| ||||| | ||||||||||||||||
Sbjct: 113 ttgttgttataagatgataaaacatgaaaattactttactcgtgact 67
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||| ||||||| | ||||||||||||||
Sbjct: 7 cgcgcccaattttgatcattcgtcttatttgaaa 40
>RF01062;MIR812;AACV01025132.1/10868-10698 39947:Oryza sativa
Japonica Group
Length = 171
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 171 gtttccgtacccaattttgatcgtccgtcttatttgaaatttttttataattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 111 t-gttgttatgagatgataaaacataaatagtactttactcgtgacttatg 62
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
||||| || |||||| ||||||||||||||||||
Sbjct: 6 cgcgcacatctttgaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AY946491.1/27-199 4530:Oryza sativa (rice)
Length = 173
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||| |||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 173 gttttcgcgctcaactttgatcgtccgtcttatttgaaatttttttataattagcatttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||| |||||||||| |||||||||||| |||||||||||||||
Sbjct: 113 t-gttgttatgggataataaaacatgaatagtactctactcgtgacttatg 64
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||| |||||||||||||| ||| ||||||||||||||
Sbjct: 3 tttctgcgcccaactttgaccgttcgtcttatttgaaa 40
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||||||||| |||||||| ||| |||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcgcagaaaa 2
>RF01062;MIR812;AY946444.1/29-199 4530:Oryza sativa (rice)
Length = 171
Score = 115 bits (58), Expect = 2e-25
Identities = 97/111 (87%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| |||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 171 gtttccgcgtccaactttgatcgttcgtcttatttgaaatttttttataattagcatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| |||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 111 t-gttattataagatgataaaatatgaatagtactttactcgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||||||||||| | |||||||||||||||||
Sbjct: 137 aaataagacgaacgatcaaagttggacgcggaaa 170
>RF01062;MIR812;AC119073.1/10812-10640 39947:Oryza sativa Japonica
Group
Length = 173
Score = 111 bits (56), Expect = 4e-24
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 15 gcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttg 74
|||||||||||||||||||||| |||||||| | ||||||||||||||| ||||
Sbjct: 166 gcgcccaactttgatcgtccgttttatttgagaaatttttataattagtattttt-gttg 108
Query: 75 ttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||| ||||||||| ||||||||||||||| |||||||||
Sbjct: 107 ttatgagatgataaaatataaatagtactttactcatgacttatg 63
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||| |||||| |||||||||||||
Sbjct: 3 tttccgcgcccaactttaatcgtctgtcttatttgaaa 40
>RF01062;MIR812;AACV01022766.1/13309-13482 39947:Oryza sativa
Japonica Group
Length = 174
Score = 111 bits (56), Expect = 4e-24
Identities = 86/97 (88%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| ||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 174 gtttccgtgcccaactttgatcgtccgtcttatttgaaatttttttataattagta-ttt 116
Query: 69 ttgttgttatgagataataaaatatgaatagtacttt 105
||||||||||||||| |||||||||||||| ||||||
Sbjct: 115 ttgttgttatgagatgataaaatatgaataatacttt 79
>RF01062;MIR812;AP003835.4/38107-38280 39947:Oryza sativa Japonica
Group
Length = 174
Score = 111 bits (56), Expect = 4e-24
Identities = 92/105 (87%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 15 gcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttg 74
|||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||
Sbjct: 167 gcgctcaactttgatcgtccgtcttatttgaaaaaattttataattaatattttt-gttg 109
Query: 75 ttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||| |||||| |||||||||||| |||||||||||||||
Sbjct: 108 ttatgagatgataaaacatgaatagtactctactcgtgacttatg 64
>RF01062;MIR812;AACV01010650.1/39037-39206 39947:Oryza sativa
Japonica Group
Length = 170
Score = 111 bits (56), Expect = 4e-24
Identities = 96/109 (88%), Gaps = 2/109 (1%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
||||||||| |||||||||||||||||||||||| || |||||||||||||||
Sbjct: 169 tttccgcgctcaactttgatcgtccgtcttattt-aattttttttataattagtattttt 111
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 110 -gttgttatgagatgataaaatatgaatagtactttactcatgacttat 63
>RF01062;MIR812;AAAA02007290.1/11578-11749 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 1e-23
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagat 83
|||||||||||||||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 157 tttgatcgtccgtcttatttgaaatttttttataattagtattttt-gttgttataagat 99
Query: 84 aataaaatatgaatagtactttactcgtgacttatg 119
|||||| ||||||||||||||||||||||||||||
Sbjct: 98 gataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AAAA02027930.1/20244-20415 39946:Oryza sativa Indica
Group
Length = 172
Score = 109 bits (55), Expect = 1e-23
Identities = 85/96 (88%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagat 83
|||||||||||||||||||| ||| ||||||||||||||| |||||||||||||
Sbjct: 157 tttgatcgtccgtcttatttaaaaattttttataattagtattttt-gttgttatgagat 99
Query: 84 aataaaatatgaatagtactttactcgtgacttatg 119
|||||| ||||||||||||||||||||||||||||
Sbjct: 98 gataaaacatgaatagtactttactcgtgacttatg 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||| |||| |||||||||||||||||||||
Sbjct: 36 taaataagatgaacagttaaagttggacgcggaaaa 1
>RF01058;MIR806;AAAA02001819.1/3379-3140 39946:Oryza sativa Indica
Group
Length = 240
Score = 109 bits (55), Expect = 1e-23
Identities = 97/112 (86%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
||||| ||||||||||||||||| || ||||||||||||| |||||||| ||||
Sbjct: 34 agttttcgcgcccaactttgatcatctgtcttatttgaaattttttcataattagcattt 93
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 94 t-tgttgttatgaaatgataaaatatgaatagtactttactcatgacttatg 144
>RF01062;MIR812;AAAA02018686.1/12077-11907 39946:Oryza sativa Indica
Group
Length = 171
Score = 107 bits (54), Expect = 6e-23
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| | |||||||||||| |||||||||||||| ||||||| ||||||
Sbjct: 171 gtttccgcgtctaactttgatcgttcgtcttatttgaaagttttttataattaatatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 111 ta-ttgttatgagatgataaaatataaatagtactttactcgtgacttatg 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
||||||||||||||||||| ||||||||||||||
Sbjct: 2 tttccgcgcccaactttgaccgtccgtcttattt 35
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||||||||||| | |||||| ||||||||||
Sbjct: 137 aaataagacgaacgatcaaagttagacgcggaaa 170
>RF01062;MIR812;AAAA02018757.1/7221-7031 39946:Oryza sativa Indica
Group
Length = 191
Score = 107 bits (54), Expect = 6e-23
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
Sbjct: 180 caactttgatcgtccgtcttatttgaaaactttttataattagtattttt-gttgttacg 122
Query: 80 agataataaaatatgaatagtacttta 106
|||||||||||||||||||||||||||
Sbjct: 121 agataataaaatatgaatagtacttta 95
>RF01062;MIR812;AP005675.3/91888-91727 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 6e-23
Identities = 87/99 (87%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
||||||||||||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 150 aactttgatcgtccgtcttatttaaaatttttttataattagtattttta-ttgttatga 92
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||||||||||||||||||||||||
Sbjct: 91 gatgataaaacatgaatagtactttactcgtgacttatg 53
>RF01062;MIR812;AACV01023121.1/33022-33182 39947:Oryza sativa
Japonica Group
Length = 161
Score = 107 bits (54), Expect = 6e-23
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 161 gttttcgcgcccaattttgatcgtccgtcttatttgaaaattttttataattagtatttt 102
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||| | ||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 101 t-gttgttacgtgatgataaaacatgaatagtgctttactcgtgacttatg 52
>RF01062;MIR812;AAAA02007810.1/5543-5371 39946:Oryza sativa Indica
Group
Length = 173
Score = 107 bits (54), Expect = 6e-23
Identities = 95/111 (85%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 173 gtttctgcgccaaactttgatcgtccgtcttatttgaaatttttttataattagcatttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||| |||| |||||||| ||||| |||||||| ||||||||||
Sbjct: 113 ttgttgttataagatgataaaataagaataatactttaccagtgacttatg 63
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||| | | ||||||||||||||
Sbjct: 7 cgcgcccaactttgaacattcgtcttatttgaaa 40
>RF01062;MIR812;AP003808.3/36375-36546 39947:Oryza sativa Japonica
Group
Length = 172
Score = 107 bits (54), Expect = 6e-23
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||
Sbjct: 172 gttttcgcgcccaattttgatcgtccgtcatatttgaaaaaaatttataattagtatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| ||||||||| ||||||| |||| ||||||||||||
Sbjct: 112 t-gttgttatgagatgataaaatataaatagtattttattcgtgacttatg 63
>RF01062;MIR812;AACV01012761.1/14916-15085 39947:Oryza sativa
Japonica Group
Length = 170
Score = 107 bits (54), Expect = 6e-23
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 170 gtttctgcgtccaactttgatcgttcgtcttatttgaaatttttttataattagtatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 110 c-gttgttatgagatgataaaacatgaatactactttactcgtgacttatg 61
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| | |||||||||| ||||||||||||||||
Sbjct: 2 tttccgcgtctaactttgatcatccgtcttatttgaaa 39
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||||||||||| | |||||||||||| ||||
Sbjct: 136 aaataagacgaacgatcaaagttggacgcagaaa 169
>RF01058;MIR806;AAAA02016915.1/1166-927 39946:Oryza sativa Indica
Group
Length = 240
Score = 107 bits (54), Expect = 6e-23
Identities = 100/115 (86%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 4 cataagtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagt 63
||||||||||||||||||| ||| ||||| |||||||||| ||| |||||||||
Sbjct: 31 cataagtttccgcgcccaattttaatcgttcgtcttattt-aaatttttttataattagt 89
Query: 64 attttttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
|||||| |||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 90 attttta-ttgttatgagatgataaaacatgaatagtactttactcgtgacttat 143
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaa 179
||||||||||||||| ||||| |||| ||||||||
Sbjct: 71 taaataagacgaacgattaaaattgggcgcggaaa 37
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| |||||||| | ||||||||||||||
Sbjct: 204 tttccgcgtccaactttaaccgtccgtcttattt 171
>RF01062;MIR812;AAAA02036738.1/10015-9844 39946:Oryza sativa Indica
Group
Length = 172
Score = 105 bits (53), Expect = 2e-22
Identities = 86/98 (87%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 18 cccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtta 77
||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 163 cccaattttaatcgtccgtcttatttgaaatatttttataattagtattttt-gttgtta 105
Query: 78 tgagataataaaatatgaatagtactttactcgtgact 115
| ||||||||||||| ||||||||||||||||||||||
Sbjct: 104 taagataataaaatacgaatagtactttactcgtgact 67
>RF01062;MIR812;AAAA02035447.1/2861-2704 39946:Oryza sativa Indica
Group
Length = 158
Score = 105 bits (53), Expect = 2e-22
Identities = 92/106 (86%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 11 ttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttttt 70
|||| |||| |||||||||||||||||||||||| || |||||||||||||||
Sbjct: 158 ttccacgcctaactttgatcgtccgtcttatttgtaaattttttataattagtattttt- 100
Query: 71 gttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 99 gttgttatgagatgataaaacatgaatagtaatttactcgtgactt 54
>RF01062;MIR812;AACV01008241.1/3292-3120 39947:Oryza sativa Japonica
Group
Length = 173
Score = 105 bits (53), Expect = 2e-22
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 17 gcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtt 76
|||||| |||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 165 gcccaattttgatcgtctgtcttatttgaaatttttttataattagtattttttgttgtt 106
Query: 77 atgagataataaaatatgaatagtacttta 106
||||||| |||||| |||||||||||||||
Sbjct: 105 atgagatgataaaacatgaatagtacttta 76
>RF01062;MIR812;AC121365.2/126856-127026 39947:Oryza sativa Japonica
Group
Length = 171
Score = 105 bits (53), Expect = 2e-22
Identities = 95/110 (86%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||| ||||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 171 gtttccgcacccaactttaatcgtccgtcttatttgaaatttttttatgattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
| |||||||||| || |||||| ||||||||||||||||||||| |||||
Sbjct: 111 t-gttgttatgatatgataaaacatgaatagtactttactcgtggcttat 63
>RF01062;MIR812;AC134230.2/135969-136140 39947:Oryza sativa Japonica
Group
Length = 172
Score = 105 bits (53), Expect = 2e-22
Identities = 89/102 (87%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 18 cccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtta 77
||||||||||||||||||| |||||||||| |||||||| |||||| ||||||
Sbjct: 163 cccaactttgatcgtccgtattatttgaaatttttttataattagcattttta-ttgtta 105
Query: 78 tgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 104 tgagatgataaaatataaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AACV01003947.1/10244-10083 39947:Oryza sativa
Japonica Group
Length = 162
Score = 103 bits (52), Expect = 9e-22
Identities = 86/99 (86%), Gaps = 3/99 (3%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
||||||||||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 150 aactttgatcgtccgtcttatttaaattttttttataattagtattt---gttgttatga 94
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 93 gataataaaacatgaatagtactttactcgtgacttatg 55
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| |||||||||||||| ||||||||||
Sbjct: 3 tttccgcgtccaactttgatcgttcgtcttattt 36
>RF01058;MIR806;AACV01005022.1/1990-2230 39947:Oryza sativa Japonica
Group
Length = 241
Score = 103 bits (52), Expect = 9e-22
Identities = 94/109 (86%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| |||||||| |||||||||||||||||||||||| |||||||| ||||
Sbjct: 35 agtttctgcgcccaattttgatcgtccgtcttatttgaaatttttttataattagcattt 94
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
|| |||||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 95 tta-ttgttatgagatgataaaacataaatagtactttactcgtgactt 142
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||| |||||||||||||| ||| ||||||||||||||
Sbjct: 205 tttctgcgcccaactttgaccgttcgtcttatttgaaa 168
>RF01062;MIR812;AAAA02011153.1/42310-42482 39946:Oryza sativa Indica
Group
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||||||| ||||||||||||||| |||||| |
Sbjct: 161 caactttgatcgtccgtcttatttgaaaaatttttataattagtatttttc-ttgttacg 103
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| |||||||||| |||||||||||||||||
Sbjct: 102 agatgataaaacatgaatagtattttactcgtgacttatg 63
>RF01062;MIR812;AC174464.1/41456-41632 39947:Oryza sativa Japonica
Group
Length = 177
Score = 101 bits (51), Expect = 3e-21
Identities = 86/100 (86%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
||||||| ||||| |||||||||||||| ||||||| |||||||| ||||||||
Sbjct: 163 caactttaatcgttcgtcttatttgaaagttttttataattaatattttttattgttatg 104
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 103 agatgataaaatataaatagtattttactcgtgacttatg 64
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||||| ||||||||||||||||||
Sbjct: 4 tttccgcgcccaactttgaccgtccgtcttatttgaaa 41
>RF01062;MIR812;AP005739.3/54194-54021 39947:Oryza sativa Japonica
Group
Length = 174
Score = 101 bits (51), Expect = 3e-21
Identities = 87/100 (87%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnn-ataattagtattttttgttgttatg 79
|||||||||| |||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 162 aactttgatcatccgtcttatttgaaattttttttataattagtattttttattgttatg 103
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||| || |||| ||||||||||||||||||||
Sbjct: 102 agataataaaacataaatattactttactcgtgacttatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 16 cgcccaactttgatcgtccgtcttatttgaa 46
||||||||||| ||||||| |||||||||||
Sbjct: 9 cgcccaactttcatcgtccatcttatttgaa 39
>RF01062;MIR812;ABRL01001385.1/28807-28635 65489:Oryza barthii
Length = 173
Score = 101 bits (51), Expect = 3e-21
Identities = 96/112 (85%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| |||||||||||||||||||||| |||||||||| |||||||| | ||
Sbjct: 173 agtttctgcgcccaactttgatcgtccgttttatttgaaatttttttataattagcagtt 114
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| ||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct: 113 tta-ttgttataagatgataaaatatgaataatactttactcgtgacttatg 63
>RF01062;MIR812;AL442103.2/69331-69155 4530:Oryza sativa (rice)
Length = 177
Score = 101 bits (51), Expect = 3e-21
Identities = 54/55 (98%)
Strand = Plus / Minus
Query: 65 ttttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 118 ttttttgttgttatgagatgataaaatatgaatagtactttactcgtgacttatg 64
>RF01058;MIR806;AACV01005957.1/12052-12292 39947:Oryza sativa
Japonica Group
Length = 241
Score = 101 bits (51), Expect = 3e-21
Identities = 96/112 (85%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||||||| |||||||||||||| ||| |||||||||| |||||||| ||||
Sbjct: 35 agtttccgcgtccaactttgatcgttcgttttatttgaaatttttttataattagcattt 94
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||| |||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 95 t-tgttgttataagatgataaaacatgaataatactttactcgtgacttatg 145
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||| ||||||| | |||||||||||||||||
Sbjct: 70 aaataaaacgaacgatcaaagttggacgcggaaa 37
>RF01062;MIR812;AAAA02017353.1/54593-54420 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagta-ttt 67
||||| ||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 174 gtttctgcgcccaactttgatcgtccgtcttatttgaaatttttttataattagtatttt 115
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
||||||| ||| |||| || ||| | ||||| |||||||||||||||||||
Sbjct: 114 tttgttgctataagatgatgaaacacgaataatactttactcgtgacttat 64
>RF01062;MIR812;AP008209.1/13645053-13644882 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 172 gttttcgcgctcaactttgatcgtccgtcttatttgaaatttttttataattagta-ttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| |||||||||||| |||||| ||| ||||||||||||| |||| |||||
Sbjct: 113 ttattgttatgagatgataaaacatgtatagtactttacttgtgatttatg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 gcccaactttgatcgtccgtcttattt 43
|||||| ||||||||||||||||||||
Sbjct: 9 gcccaattttgatcgtccgtcttattt 35
>RF01062;MIR812;AL731585.5/116334-116173 4530:Oryza sativa (rice)
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| ||| ||||||||||| ||| |||||||||||| ||||||| ||||||
Sbjct: 162 gtttccacgctcaactttgatcatccatcttatttgaaatttttttataattaatatttt 103
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 102 ga-ttgttatgagatgataaaatatgaatagtactttactcgtgacttatg 53
>RF01062;MIR812;AP005284.3/81040-80870 39947:Oryza sativa Japonica
Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| | || ||||||||||||| |||||||||| ||||||||||||||
Sbjct: 171 gtttccgcgtctaattttgatcgtccgttttatttgaaatttttttataattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||| |||| |||||||||||||||||
Sbjct: 111 t-gttgttatgagatgataaaacatgaacagtaatttactcgtgacttatg 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||| |||||| ||| ||||||||||
Sbjct: 35 aaataagacgaacagttaaaattgaacgcggaaaa 1
>RF01062;MIR812;AAAA02020262.1/20290-20463 39946:Oryza sativa Indica
Group
Length = 174
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/99 (86%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||||| |||||||||||||| |||||||| |||||| |||||||||
Sbjct: 162 aactttgatcgttcgtcttatttgaaatttttttataattagcattttta-ttgttatga 104
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||||||||||||||||||||||||
Sbjct: 103 gatgataaaacatgaatagtactttactcgtgacttatg 65
>RF01062;MIR812;AACV01011121.1/31665-31494 39947:Oryza sativa
Japonica Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||| |||||||||||| |||||||||| ||| |||||||||||||
Sbjct: 172 gtttccgcgcctaactttgatcgttcgtcttatttaaaatttttttataattagtattta 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||| |||||| |||||||||||||||||||| |||||||
Sbjct: 112 ta-ttgttatgagatgataaaacatgaatagtactttactcgtaacttatg 63
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 cccaactttgatcgtccgtcttatttgaaa 47
||||||||||| ||||||| ||||||||||
Sbjct: 11 cccaactttgaccgtccgttttatttgaaa 40
>RF01062;MIR812;AP006186.3/121305-121135 39947:Oryza sativa Japonica
Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct: 171 gttttcgcgcccaactttaatcgtctatcttatttgaaatttttttataattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| ||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 111 t-gttattatgagatgataaaatatgattagtattttactcgtgacttatg 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||| | ||||||||||||||||||
Sbjct: 3 tttccgcgcccaactttaaccgtccgtcttatttgaaa 40
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||| |||||||||||||| ||||||||||
Sbjct: 36 aaataagacggacggttaaagttgggcgcggaaaac 1
>RF01062;MIR812;AACV01020594.1/1986-2157 39947:Oryza sativa Japonica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/99 (86%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
||||||||||||||||||||||| || |||||||| |||||| ||||||||||
Sbjct: 159 aactttgatcgtccgtcttatttaaattttttttataattagcattttt-gttgttatga 101
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||||||||||||||||||||||||
Sbjct: 100 gatgataaaacatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AP008211.1/3019166-3019336 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 86/99 (86%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
||||||||||||| |||||||||||| ||||||||||||||| ||||||||||
Sbjct: 158 aactttgatcgtctgtcttatttgaattatttttataattagtattttt-gttgttatga 100
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 99 gatgataaaacatgaataatactttactcgtgacttatg 61
>RF01062;MIR812;AAAA02020504.1/6865-7035 39946:Oryza sativa Indica
Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 171 gtttccgtgtccaactttgatcgtccgccttatttgaaatttttttataattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||||| || |||||| ||||||||||
Sbjct: 111 t-gttgttatgagatgataaaacatgaataatattttacttgtgacttatg 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 37/38 (97%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||||| |||||||||||||||||||||||||||
Sbjct: 3 tttccgcgcc-aactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AP004161.3/106159-105991 39947:Oryza sativa Japonica
Group
Length = 169
Score = 99.6 bits (50), Expect = 1e-20
Identities = 96/111 (86%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||| |||||||||||| | ||||||||||| ||| ||||||||||| ||
Sbjct: 169 gtttccgcacccaactttgattgcccgtcttattt-aaatttttttataattagtatatt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 110 t-gttgttatgagatgataaaatatgaataatactttactcgtgacttatg 61
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtctt 39
||||| || |||||||||||||||||||||
Sbjct: 2 tttccacgtccaactttgatcgtccgtctt 31
>RF01062;MIR812;AACV01020608.1/2962-2801 39947:Oryza sativa Japonica
Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 88/103 (85%)
Strand = Plus / Minus
Query: 15 gcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttg 74
||||| || |||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct: 156 gcgcctaattttgattgtccgtcttatttgaaatttttttataattagtatttttcgttg 97
Query: 75 ttatgagataataaaatatgaatagtactttactcgtgactta 117
|| |||||| |||||| |||||||||| |||||||||||||||
Sbjct: 96 ttgtgagatcataaaacatgaatagtaatttactcgtgactta 54
>RF01062;MIR812;AAAA02015039.1/40485-40656 39946:Oryza sativa Indica
Group
Length = 172
Score = 99.6 bits (50), Expect = 1e-20
Identities = 89/103 (86%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 17 gcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtt 76
|||||||||| ||||| ||| |||||||||| ||||||||||||||| ||||||
Sbjct: 164 gcccaactttaatcgttcgttttatttgaaatttttttataattagtattttt-gttgtt 106
Query: 77 atgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 105 atgagatgataaaacatgaatagtgctttactcgtgacttatg 63
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||||||||||||| |||||||||||||||||
Sbjct: 35 aaataagacgaacggtcaaagttggacgcggaaa 2
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| |||||||||| ||| ||||||||||||||
Sbjct: 2 tttccgcgtccaactttgaccgttcgtcttatttgaaa 39
>RF01062;MIR812;AACV01025578.1/4137-4307 39947:Oryza sativa Japonica
Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||| |||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 171 gtttccgcgcctaactttgatcgtccgtcttatttgaattttttttataactagcatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||| |||||||||||||||||||||| |||| |||||||
Sbjct: 111 ta-ttgttatgagatgataaaatatgaatagtactttagtcgtaacttatg 62
>RF01062;MIR812;BX000502.2/56342-56514 4530:Oryza sativa (rice)
Length = 173
Score = 99.6 bits (50), Expect = 1e-20
Identities = 97/112 (86%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| | ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 173 agtttctgtgcccaactttgatcgtccgtcttatttgaaatttttt-ataattagtattt 115
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| ||||||||||||| |||||| |||||||||| |||| |||||||||||
Sbjct: 114 tt-gttgttatgagatgataaaacatgaatagtattttatgcgtgacttatg 64
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| || ||||||||||||||||||||||||||||
Sbjct: 3 tttccgtgctcaactttgatcgtccgtcttatttgaaa 40
>RF01062;MIR812;AP003922.2/73692-73522 39947:Oryza sativa Japonica
Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||| ||||||| ||||||||| ||||||||| |||||||| |||||
Sbjct: 171 gtttccgcgctcaactttaatcgtccgttttatttgaattttttttataattagcatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 111 t-gttgttatgagatgataaaacatgaatagtactttacttgtgacttatg 62
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 147 aataagacgaacggttaaagttggacgcggaaaac 181
||||||||||||||| |||||||| ||||||||||
Sbjct: 35 aataagacgaacggtcaaagttgggcgcggaaaac 1
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatt 42
||||||||||||||||||| ||| |||||||||
Sbjct: 3 tttccgcgcccaactttgaccgttcgtcttatt 35
>RF01062;MIR812;AP008213.1/4933213-4933383 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||| ||||||||||| |||||||||||| ||| |||||||| | ||
Sbjct: 171 gttttcgcgctcaactttgatcatccgtcttatttaaaatttttttataattagca-att 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 112 ttgttgttataagataataaaacatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02004016.1/1508-1676 39946:Oryza sativa Indica
Group
Length = 169
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||||||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 169 gtttccgcgcccaactttgatcgtctgtcttatttgaaatttttttataattagca-ttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| ||| ||| |||| |||||| |||||||||| |||||||||||||||||
Sbjct: 110 ttcttgatataagatgataaaacatgaatagtattttactcgtgacttatg 60
>RF01062;MIR812;AACV01002667.1/14693-14523 39947:Oryza sativa
Japonica Group
Length = 171
Score = 99.6 bits (50), Expect = 1e-20
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||
Sbjct: 171 gtttccgtgcccaactttgatcgtccatcttatttaaaatttttttataattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||| |||||| |||||||||||||||||| | |||||||
Sbjct: 111 c-gttgttatgagatgataaaacatgaatagtactttactcataacttatg 62
>RF01062;MIR812;AAAA02004189.1/13863-13695 39946:Oryza sativa Indica
Group
Length = 169
Score = 97.6 bits (49), Expect = 5e-20
Identities = 95/110 (86%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| |||||||| |||||||||||||||| ||| |||||||| |||||
Sbjct: 169 gtttccgcgtccaactttaatcgtccgtcttattt-aaaattttttataattagcatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
| |||||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 110 t-gttgttataagatgataaaacatgaatagtactttactcgtgacttat 62
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaagttggacgcggaaa 179
||||||||||| ||| |||||||||||||||||||
Sbjct: 134 taaataagacggacgattaaagttggacgcggaaa 168
>RF01062;MIR812;AAAA02026397.1/276-440 39946:Oryza sativa Indica
Group
Length = 165
Score = 97.6 bits (49), Expect = 5e-20
Identities = 97/113 (85%), Gaps = 3/113 (2%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnn--ataattagtatt 66
||||||||| |||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 165 gtttccgcgtccaactttgatcgtccatcttatttgaaatttttttttataattagtatt 106
Query: 67 ttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||| ||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 105 ttta-ttgttataagatgataaaacatgaatagtactttactcgtgacttatg 54
>RF01062;MIR812;ABRL01002063.1/10967-10809 65489:Oryza barthii
Length = 159
Score = 97.6 bits (49), Expect = 5e-20
Identities = 62/65 (95%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 113 ataattagtattttt-gttgttatgagatgataaaacatgaatagtactttactcgtgac 55
Query: 115 ttatg 119
|||||
Sbjct: 54 ttatg 50
>RF01062;MIR812;AAAA02013232.1/6308-6477 39946:Oryza sativa Indica
Group
Length = 170
Score = 97.6 bits (49), Expect = 5e-20
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
|||||| ||| || |||||||||||||||||||| ||| |||||||||||||||
Sbjct: 169 tttccgtgcctaattttgatcgtccgtcttatttaaaaaataataataattagtattttt 110
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||| |||||| || ||||||| |||||||||||||||||
Sbjct: 109 -gttgttatgagatgataaaacataaatagtattttactcgtgacttatg 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgt 36
|||||||| ||||||||||||||||||
Sbjct: 2 tttccgcgtccaactttgatcgtccgt 28
>RF01062;MIR812;AP008208.1/25944725-25944560 39947:Oryza sativa
Japonica Group
Length = 166
Score = 97.6 bits (49), Expect = 5e-20
Identities = 88/102 (86%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 15 gcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttg 74
|||||||| |||||||||||||||||||||||| |||||||| |||||| |||
Sbjct: 164 gcgcccaattttgatcgtccgtcttatttgaaatttttttataattagcattttta-ttg 106
Query: 75 ttatgagataataaaatatgaatagtactttactcgtgactt 116
||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 105 ttatgagatgataaaacataaatagtactttactcgtgactt 64
>RF01062;MIR812;AP008207.1/14327956-14328125 39947:Oryza sativa
Japonica Group
Length = 170
Score = 97.6 bits (49), Expect = 5e-20
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||| |||||||||| |||||||||||| ||| | ||||| |||||
Sbjct: 170 gtttccgcgcctaactttgatcatccgtcttatttaaaatttttttagaattaacatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
| ||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 110 t-gttgttatgagatgataaaacatgaatagtactttactcgtgacttat 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||||||||| ||||||| | ||||||||
Sbjct: 35 aaataagacgaacggtcaaagttgaatgcggaaaa 1
>RF01062;MIR812;AACV01018820.1/15282-15123 39947:Oryza sativa
Japonica Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 85/98 (86%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct: 160 gtttccgcgcccaactttgatagtccgtcttatttgaaatttttttataattagta-ttt 102
Query: 69 ttgttgttatgagataataaaatatgaatagtacttta 106
|| ||||||| |||| |||||| |||||||||||||||
Sbjct: 101 ttattgttataagatgataaaacatgaatagtacttta 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||||| ||| ||||||||||||||||||
Sbjct: 35 aaataagacgaatggtcaaagttggacgcggaaaa 1
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| |||||||||| | | ||||||||||||||
Sbjct: 2 tttccgcgtccaactttgaccattcgtcttatttgaaa 39
>RF01062;MIR812;AAAA02007013.1/4435-4263 39946:Oryza sativa Indica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| |||||||| ||||||| |||||||||||||||| |||||||| ||||
Sbjct: 173 agtttctgcgcccaattttgatcatccgtcttatttgaaatttttttataattagcattt 114
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
|| |||||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 113 tta-ttgttatgagatgataaaacataaatagtactttactcgtgactt 66
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||| |||||||||||||| ||| ||||||||||||||
Sbjct: 3 tttctgcgcccaactttgaccgttcgtcttatttgaaa 40
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||| |||||||| ||| ||||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcgcagaaaac 1
>RF01062;MIR812;AP003374.3/116876-116710 39947:Oryza sativa Japonica
Group
Length = 167
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||| |||||| ||||||||||||| |||||||| |||||| ||||||||
Sbjct: 157 ccaactttaatcgtctgtcttatttgaaatttttttataattagcattttt-gttgttat 99
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 98 gagatgataaaacatgaatagtactttactcttgacttatg 58
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||| ||||||| ||| ||||||||||
Sbjct: 36 taaataagacgaatggttaaaattgaacgcggaaaa 1
>RF01062;MIR812;AAAA02011051.1/19891-19721 39946:Oryza sativa Indica
Group
Length = 171
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||||||||||| |||||||||||| ||||||||||||||| ||||||||
Sbjct: 161 ccaactttgatcgtccatcttatttgaaaattttttataattagtattttt-gttgttat 103
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||| | || |||| ||||||||||||||||||||
Sbjct: 102 gagatgataagacataaataatactttactcgtgacttatg 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 153 acgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||| ||||
Sbjct: 28 acgaacggttaaagttggacgcgaaaaa 1
>RF01062;MIR812;AP005158.3/28303-28131 39947:Oryza sativa Japonica
Group
Length = 173
Score = 95.6 bits (48), Expect = 2e-19
Identities = 90/105 (85%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 15 gcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttg 74
|||||||| ||| |||||||||||| |||||| ||||||||||||||| ||||
Sbjct: 167 gcgcccaattttaatcgtccgtcttgtttgaattttttttataattagtattttt-gttg 109
Query: 75 ttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 108 ttataagatgataaaacatgaatagtactttactcgtgacttatg 64
>RF01062;MIR812;AAAA02026200.1/6578-6749 39946:Oryza sativa Indica
Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 61/64 (95%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 125 ataattagtattttta-ttgttatgagataataaaatatgaataatactttactcgtgac 67
Query: 115 ttat 118
||||
Sbjct: 66 ttat 63
>RF01062;MIR812;AP008215.1/16622921-16622752 39947:Oryza sativa
Japonica Group
Length = 170
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
||||||| |||| |||||||||||||||| ||||||||||||||| |||| |||
Sbjct: 160 ccaacttagatcatccgtcttatttgaaaattttttataattagtattttt-gttgctat 102
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 101 gagatgataaaacatgaataatactttactcgtgacttatg 61
>RF01062;MIR812;AP008208.1/13044189-13044045 39947:Oryza sativa
Japonica Group
Length = 145
Score = 95.6 bits (48), Expect = 2e-19
Identities = 84/97 (86%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| |||||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 145 gtttccgtgcccaactttgatcgtccgtcttatttgaattttttttataattatta-ttt 87
Query: 69 ttgttgttatgagataataaaatatgaatagtacttt 105
|| |||||||||||| |||||||||||||||||||||
Sbjct: 86 ttattgttatgagatgataaaatatgaatagtacttt 50
>RF01062;MIR812;AP008212.1/10980126-10979955 39947:Oryza sativa
Japonica Group
Length = 172
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/101 (86%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||| ||||||| |||||||||||| ||||||| ||||||| ||||||||
Sbjct: 162 ccaactttaatcgtccatcttatttgaaaattttttataattactattttt-gttgttat 104
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| |||||||| |||||||||||||||||||
Sbjct: 103 gagattataaaacatgaatagcactttactcgtgacttatg 63
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| |||||||| ||| ||||||||||||
Sbjct: 2 tttccgcgaccaactttaatcatccgtcttattt 35
>RF01062;MIR812;AACV01024312.1/7356-7525 39947:Oryza sativa Japonica
Group
Length = 170
Score = 93.7 bits (47), Expect = 8e-19
Identities = 93/108 (86%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 169 tttccgcgctcaactttgatcgtccgtcttatttgaa-tttttttataattagtattttt 111
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgactta 117
||||||||||||| | |||| || ||||||||||||| |||||||||
Sbjct: 110 -gttgttatgagatgacaaaacataaatagtactttacacgtgactta 64
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| | |||||||||||||||||||||||||||
Sbjct: 2 tttccgcgtctaactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02018660.1/8972-9143 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 8e-19
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
||||||| ||| ||| |||||||||||||||||||||| |||||||||||||
Sbjct: 172 agtttccccgcacaaacttgatcgtccgtcttatttgaa-tttttttataattagtattt 114
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| ||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 113 tt-gttgttatgagatgataaaacataaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AAAA02008855.1/40375-40547 39946:Oryza sativa Indica
Group
Length = 173
Score = 93.7 bits (47), Expect = 8e-19
Identities = 86/100 (86%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 162 caactttgatcgtccgtcttatttgaaatttttttataattagtattttta-ttgttatg 104
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| ||| ||||||||||| |||||| |||||
Sbjct: 103 agatgataaaacatgtatagtactttattcgtgatttatg 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 gcccaactttgatcgtccgtcttattt 43
|||||| ||||||||||||||||||||
Sbjct: 10 gcccaattttgatcgtccgtcttattt 36
>RF01062;MIR812;AAAA02017582.1/50910-50736 39946:Oryza sativa Indica
Group
Length = 175
Score = 93.7 bits (47), Expect = 8e-19
Identities = 97/114 (85%), Gaps = 4/114 (3%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| |||| ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 175 gtttccacgccaaactttgatcgtccgtcttatttgaaaattttttataattagta-ttt 117
Query: 69 ttgttgttatga---gataataaaatatgaatagtactttactcgtgacttatg 119
|| ||||||||| ||| |||||| |||||||||| |||||||||||||||||
Sbjct: 116 ttattgttatgagatgatcataaaacatgaatagtattttactcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| || ||||||| ||||||||||||||||||||
Sbjct: 3 tttccgtgctcaactttaatcgtccgtcttatttgaaa 40
>RF01062;MIR812;AAAA02003808.1/33045-32875 39946:Oryza sativa Indica
Group
Length = 171
Score = 93.7 bits (47), Expect = 8e-19
Identities = 60/63 (95%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 57 aattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 124 aattagtattttt-gttgttatgagatgatgaaatatgaatagtactttactcgtgactt 66
Query: 117 atg 119
|||
Sbjct: 65 atg 63
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||| ||||||||||| | || |||||||||||||||
Sbjct: 3 tttccacgcccaactttaaccgaccgtcttatttgaaa 40
>RF01062;MIR812;AP008209.1/9550679-9550510 39947:Oryza sativa
Japonica Group
Length = 170
Score = 93.7 bits (47), Expect = 8e-19
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
||||||||||||||||||||||||| ||| ||||||||||||||| |||||||
Sbjct: 160 ccaactttgatcgtccgtcttattt-aaattttttaataattagtattttta-ttgttat 103
Query: 79 gagataataaaatatgaatagtacttta 106
||||||||||||||||||||||||||||
Sbjct: 102 gagataataaaatatgaatagtacttta 75
>RF01062;MIR812;AAAA02032579.1/242-413 39946:Oryza sativa Indica
Group
Length = 172
Score = 93.7 bits (47), Expect = 8e-19
Identities = 96/112 (85%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnn-ataattagtattt 67
||||||||| | ||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 172 gtttccgcgtctaactttgatcgtccgtcttattttaaaaaatttttataattagtattt 113
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| |||||||| |||| ||||||||||||||||||||||||| | |||||||
Sbjct: 112 tt-gttgttataagatgataaaatatgaatagtactttactcataacttatg 62
>RF01062;MIR812;AACV01020326.1/8104-8266 39947:Oryza sativa Japonica
Group
Length = 163
Score = 93.7 bits (47), Expect = 8e-19
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 17 gcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtt 76
||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 154 gcccaactttgatcgtccgtcttatttgaaatttttttataattagta-cttttgttgtt 96
Query: 77 atgagataataaaatatgaatagtactttact 108
||||||| |||||||||||| ||||||||||
Sbjct: 95 atgagatgataaaatatgaacggtactttact 64
>RF01062;MIR812;AAAA02022381.1/2540-2699 39946:Oryza sativa Indica
Group
Length = 160
Score = 91.7 bits (46), Expect = 3e-18
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 57 aattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 112 aattagtattttt-gttgttatgagatgataaaacatgaatagtactttactcgtgactt 54
Query: 117 at 118
||
Sbjct: 53 at 52
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||||| ||||| |||||| ||||||||||||||
Sbjct: 2 tttccgcgcctaacttcgatcgttcgtcttatttgaaa 39
>RF01062;MIR812;AP008211.1/21911813-21911642 39947:Oryza sativa
Japonica Group
Length = 172
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | |||||||||||| ||| |||||||||||| ||||||||||||||
Sbjct: 172 gtttccgtgtccaactttgatcatccatcttatttgaaattattttataattagtatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| || |||| || |||||||||||||||||
Sbjct: 112 t-gttgttatgagatgataaaacataaataatattttactcgtgacttatg 63
>RF01062;MIR812;AACV01016492.1/19876-19710 39947:Oryza sativa
Japonica Group
Length = 167
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| |||||||||||||| ||| |||||||||| |||||||| | ||
Sbjct: 167 gtttccgcgtccaactttgatcgttcgttttatttgaaatttttttataattag-aagtt 109
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||| |||| |||||| |||||| |||||||||||||||||||||
Sbjct: 108 ttgttgttataagatgataaaacatgaatggtactttactcgtgacttatg 58
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaagttggacgcggaaa 179
|||||| ||||||| | |||||||||||||||||
Sbjct: 133 aaataaaacgaacgatcaaagttggacgcggaaa 166
>RF01062;MIR812;AACV01008221.1/3287-3126 39947:Oryza sativa Japonica
Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 82/95 (86%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagat 83
|||||||||| |||||||||||| ||||||||||||||| ||| |||| ||||
Sbjct: 147 tttgatcgtctatcttatttgaaatttttttataattagtattttt-gttattataagat 89
Query: 84 aataaaatatgaatagtactttactcgtgacttat 118
||||||||||||||||||||||||||||||||||
Sbjct: 88 gataaaatatgaatagtactttactcgtgacttat 54
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 cccaactttgatcgtccgtcttattt 43
||||||||||||||||||||||||||
Sbjct: 11 cccaactttgatcgtccgtcttattt 36
>RF01062;MIR812;AAAA02001058.1/3820-3989 39946:Oryza sativa Indica
Group
Length = 170
Score = 91.7 bits (46), Expect = 3e-18
Identities = 92/107 (85%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 170 gttttcgcgcccaactttgatcgtccgtcttatttgaa--ttttttataattagta-ttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgact 115
|||||||||| |||| |||||| |||||||||| ||||||||||||
Sbjct: 113 ttgttgttataagatgataaaacatgaatagtatcttactcgtgact 67
>RF01062;MIR812;AAAA02008846.1/795-964 39946:Oryza sativa Indica
Group
Length = 170
Score = 91.7 bits (46), Expect = 3e-18
Identities = 88/103 (85%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 17 gcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtt 76
||||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||
Sbjct: 162 gcccaactttgatcgtctgtcttgtttgaaatttttttataattagtattttt-gttgtt 104
Query: 77 atgagataataaaatatgaatagtactttactcgtgacttatg 119
|| |||| ||||||||||||||||| |||| |||||||||||
Sbjct: 103 attagatgataaaatatgaatagtattttatacgtgacttatg 61
>RF01062;MIR812;AACV01016893.1/6094-5925 39947:Oryza sativa Japonica
Group
Length = 170
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||||||||| |||||||||| ||||||| ||||||| || ||||| |
Sbjct: 158 aactttgatcgtccgttttatttgaaaaatttttataattaatattttt-gtagttataa 100
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| ||||||||||||||| |||||||||||||||||||
Sbjct: 99 gatgataaaatatgaatagcactttactcgtgacttatg 61
>RF01062;MIR812;AAAA02027221.1/2770-2605 39946:Oryza sativa Indica
Group
Length = 166
Score = 91.7 bits (46), Expect = 3e-18
Identities = 85/99 (85%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||||||||| |||||| || ||||||||||||||| |||||||||
Sbjct: 154 aactttgatcgtccgttttatttaaattttttttataattagtattttta-ttgttatga 96
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||||||||||||||||||||||||
Sbjct: 95 gatgataaaacatgaatagtactttactcgtgacttatg 57
>RF01062;MIR812;AP008208.1/15408252-15408424 39947:Oryza sativa
Japonica Group
Length = 173
Score = 91.7 bits (46), Expect = 3e-18
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| | ||||||||| | ||||||||||||| |||||||||||||
Sbjct: 173 gtttccgcgtctaactttgattatttgtcttatttgaaaaaaaattataattagtatttg 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 113 t-gttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 64
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 19 ccaactttgatcgtccgtcttatttgaaa 47
|||||||||||||||||||||||||||||
Sbjct: 11 ccaactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02004346.1/75869-75699 39946:Oryza sativa Indica
Group
Length = 171
Score = 91.7 bits (46), Expect = 3e-18
Identities = 92/107 (85%), Gaps = 3/107 (2%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 171 gttttcgcgcccaactttgatcgtccgtcttatttgaa--ttttttataattagtattat 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgact 115
|| |||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 113 a-gtggttatgtgatgataaaatatgaatagtactttactcgtgact 68
>RF01062;MIR812;AP008209.1/27052678-27052511 39947:Oryza sativa
Japonica Group
Length = 168
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 113 tttttgttgttatgagatgataaaacatgaatagtactttactcgtgacttatg 60
>RF01058;MIR806;AACV01003457.1/7153-7393 39947:Oryza sativa Japonica
Group
Length = 241
Score = 91.7 bits (46), Expect = 3e-18
Identities = 97/115 (84%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 5 ataagtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagta 64
|||||||| || |||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 32 ataagttttcgtgcccaactttgatcatccgtcttatttgaactttttttataattagta 91
Query: 65 ttttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||| |||||| ||||||||||||||| ||| |||||||
Sbjct: 92 tttttc-ttgttatgagatgataaaacatgaatagtactttatgcgtaacttatg 145
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttga 45
|||||| |||||||||| ||||||||||||||||||
Sbjct: 205 tttccgtgcccaactttaatcgtccgtcttatttga 170
>RF01062;MIR812;AAAA02017731.1/13732-13902 39946:Oryza sativa Indica
Group
Length = 171
Score = 89.7 bits (45), Expect = 1e-17
Identities = 95/111 (85%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | ||||||||||| |||||||||||| |||| |||||||| |||||
Sbjct: 171 gtttccgtgtccaactttgattgtccgtcttattcgaaatttttt-ataattagcatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| |||||| |||||||||||||||||||||
Sbjct: 112 t-gttgttatgagatgataaaacatgaatggtactttactcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttgg 170
||||||||||||||||||||||||||
Sbjct: 36 taaataagacgaacggttaaagttgg 11
>RF01062;MIR812;AP008217.1/4350763-4350922 39947:Oryza sativa
Japonica Group
Length = 160
Score = 89.7 bits (45), Expect = 1e-17
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||
Sbjct: 114 ataattagtattttt-gttgttatgagatgataaaacatgaatggtactttactcgtgac 56
Query: 115 ttatg 119
|||||
Sbjct: 55 ttatg 51
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
||||||| ||||| ||| ||||||||||||||||
Sbjct: 2 tttccgcacccaattttaatcgtccgtcttattt 35
>RF01062;MIR812;AAAA02003190.1/914-1079 39946:Oryza sativa Indica
Group
Length = 166
Score = 89.7 bits (45), Expect = 1e-17
Identities = 94/110 (85%), Gaps = 2/110 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||
Sbjct: 166 gtttccgcgtccaactttaatcatccgtcttattt-aaaattttttataattagtatttt 108
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
| |||||||| | || ||||||||||||||||||||||||||||| ||||
Sbjct: 107 t-gttgttataatatgataaaatatgaatagtactttactcgtgatttat 59
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaagttggacgcggaaa 179
||||||||||| | | |||||||||||||||||||
Sbjct: 131 taaataagacggatgattaaagttggacgcggaaa 165
>RF01062;MIR812;AP008208.1/12857069-12856898 39947:Oryza sativa
Japonica Group
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 87/102 (85%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 18 cccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtta 77
||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct: 163 cccaaatttgatcatccgtcttatttgaaatttttttataattagtattttta-ttgtta 105
Query: 78 tgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 104 tgagatgataaaacatgaatagtactttatacgtgacttatg 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 caactttgatcgtccgtcttattt 43
||||||||||||||||||||||||
Sbjct: 13 caactttgatcgtccgtcttattt 36
>RF01062;MIR812;AACV01006536.1/45283-45121 39947:Oryza sativa
Japonica Group
Length = 163
Score = 89.7 bits (45), Expect = 1e-17
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||
Sbjct: 124 ataattagtattttt-gttattacgagataataaaatatgaataatactttactcgtgac 66
Query: 115 ttatg 119
|||||
Sbjct: 65 ttatg 61
>RF01062;MIR812;AL928751.2/51474-51645 4530:Oryza sativa (rice)
Length = 172
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/98 (85%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 18 cccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtta 77
|||||||||||||||||||| ||||||||| |||||||| |||||| |||||||
Sbjct: 163 cccaactttgatcgtccgtcatatttgaaatttttttataattagcattttt-gttgtta 105
Query: 78 tgagataataaaatatgaatagtactttactcgtgact 115
|||||| |||||| ||||||| ||||||| ||||||||
Sbjct: 104 tgagatgataaaacatgaatattactttattcgtgact 67
>RF01062;MIR812;AY946463.1/200-28 4530:Oryza sativa (rice)
Length = 173
Score = 89.7 bits (45), Expect = 1e-17
Identities = 97/113 (85%), Gaps = 4/113 (3%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnn--ataattagtatt 66
||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 173 gtttccgcgcccaactttgatcgtca-tcttatttgaaatttttttttataattagtatt 115
Query: 67 ttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||| ||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 114 ttta-ttgttataagatgataaaacatgaatagtactttactcgtgacttatg 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||| ||| |||||| ||||||||||||
Sbjct: 36 aaataagacgaatggtcaaagtttgacgcggaaaac 1
>RF01062;MIR812;AP003871.3/137479-137311 39947:Oryza sativa Japonica
Group
Length = 169
Score = 89.7 bits (45), Expect = 1e-17
Identities = 90/106 (84%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgtt 73
|||| ||||||||||||||| || |||||| ||| ||||||| ||||||| |||
Sbjct: 164 cgcgtccaactttgatcgtcggttttatttaaaaactttttataattaatattttt-gtt 106
Query: 74 gttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 105 gttatgagatcataaaacatgaatagtactttactcatgacttatg 60
>RF01062;MIR812;ABRL01002073.1/6466-6304 65489:Oryza barthii
Length = 163
Score = 87.7 bits (44), Expect = 5e-17
Identities = 92/109 (84%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||| | ||||||| ||||| |||||||||| ||| ||||||| ||||||
Sbjct: 163 gtttccgcactcaactttaatcgttcgtcttatttaaaattattttataattaatatttt 104
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgactta 117
| ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 103 ta-ttgttataagatgataaaatatgaatagtactttactcgtgactta 56
>RF01062;MIR812;AACV01024672.1/16013-16181 39947:Oryza sativa
Japonica Group
Length = 169
Score = 87.7 bits (44), Expect = 5e-17
Identities = 85/98 (86%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||
Sbjct: 169 gtttccgtgcccaactttaatcatccgtcttatttgaaatttttt-ataattagtatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtacttta 106
| |||||||||||| ||||||||||||||||||||||
Sbjct: 110 ta-ttgttatgagatgataaaatatgaatagtacttta 74
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| ||| ||||||||| || ||||||||||||||
Sbjct: 2 tttccgtgcctaactttgatggttcgtcttatttgaaa 39
>RF01062;MIR812;AP008209.1/20637763-20637935 39947:Oryza sativa
Japonica Group
Length = 173
Score = 87.7 bits (44), Expect = 5e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 58 attagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgactta 117
|||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 124 attaatattttttgttgttattagataataaaatatgaatagtactttacgtgtgactta 65
>RF01062;MIR812;AP003203.3/101179-101008 39947:Oryza sativa Japonica
Group
Length = 172
Score = 87.7 bits (44), Expect = 5e-17
Identities = 86/101 (85%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||
Sbjct: 162 ccaactttgatcgtccatcttatttgaattttttttataattattattttt-gttgttat 104
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| ||||| | ||||||||||||||||||||
Sbjct: 103 gagatgataaaacatgaacaatactttactcgtgacttatg 63
>RF01062;MIR812;AP008208.1/7741344-7741185 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 86/101 (85%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
||||||||||||||| || ||||||||| ||||||||||||||| ||||||||
Sbjct: 150 ccaactttgatcgtctgttttatttgaattttttttataattagtattttt-gttgttat 92
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||||| ||||||| || |||||||||
Sbjct: 91 gagatgataaaatatgaataatactttattcatgacttatg 51
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||| |||||| ||| ||||||||||||||||
Sbjct: 2 tttccgtgcccaattttaatcgtccgtcttattt 35
>RF01062;MIR812;AP003338.3/4697-4870 39947:Oryza sativa Japonica
Group
Length = 174
Score = 87.7 bits (44), Expect = 5e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| |
Sbjct: 127 ataattagtattttt-gttgttacgagatgataaaatatgaatagtactttactcgtggc 69
Query: 115 ttat 118
||||
Sbjct: 68 ttat 65
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
||||| |||||||||||||||||| |||||||||
Sbjct: 3 tttccacgcccaactttgatcgtctgtcttattt 36
>RF01062;MIR812;AP008215.1/2023967-2023806 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 83/97 (85%), Gaps = 1/97 (1%)
Strand = Plus / Minus
Query: 23 ctttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgaga 82
|||||||||| |||||||||||||| ||||||||||||||| || ||||||||
Sbjct: 147 ctttgatcgttcgtcttatttgaaatttttttataattagtattttta-ttattatgaga 89
Query: 83 taataaaatatgaatagtactttactcgtgacttatg 119
| |||||| || |||||||||||||||||||||||||
Sbjct: 88 tgataaaacataaatagtactttactcgtgacttatg 52
Score = 73.8 bits (37), Expect = 8e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 taaataagacgaacggttaaagttggacgcggaaaac 1
>RF01062;MIR812;AP008212.1/5981335-5981494 39947:Oryza sativa
Japonica Group
Length = 160
Score = 87.7 bits (44), Expect = 5e-17
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 56 taattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgact 115
|||||||||||||| |||||||| |||| |||||| ||||||||||||||||||||||||
Sbjct: 114 taattagtattttt-gttgttataagatgataaaacatgaatagtactttactcgtgact 56
Query: 116 tatg 119
||||
Sbjct: 55 tatg 52
>RF01062;MIR812;AJ245900.1/3175-3343 4530:Oryza sativa (rice)
Length = 169
Score = 87.7 bits (44), Expect = 5e-17
Identities = 87/101 (86%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||
Sbjct: 159 ccaactttgatcgttcgt-ttatttgaaacttttttataattagtattttt-gttgttat 102
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| || ||||||||||| |||||||||||||
Sbjct: 101 gagatgataaaacataaatagtactttgctcgtgacttatg 61
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 ccaactttgatcgtccgtcttatttgaaa 47
|||||||||| ||||||||||||||||||
Sbjct: 11 ccaactttgaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02000785.1/29566-29399 39946:Oryza sativa Indica
Group
Length = 168
Score = 85.7 bits (43), Expect = 2e-16
Identities = 92/111 (82%), Gaps = 6/111 (5%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 168 gtttccacgcccaactttaatcgtccgtcttatttgaaatttttttataattagtatttt 109
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 108 ------ttatgagatgataaagcatgaatagtactatactcgtgacttatg 64
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| | |||||||||| ||||||||||||
Sbjct: 2 tttccgcgtctaactttgatcatccgtcttattt 35
>RF01062;MIR812;AC118347.2/114612-114782 39947:Oryza sativa Japonica
Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 160 caactttgatcgtccgtcttatttaaattttttttataattagtattttg-gttgttatg 102
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| || |||| ||||||||||||||||||||
Sbjct: 101 agatgataaaacattaataatactttactcgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| |||||||| ||||||||||||||||||
Sbjct: 6 cgcgcctaactttgaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AP008218.1/17839972-17840145 39947:Oryza sativa
Japonica Group
Length = 174
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 65 ttttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 116 ttttttgttgttatgagatgataaaagatgaatagtattttactcgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| |||||||||||||||| ||||||||||
Sbjct: 6 cgcgcctaactttgatcgtccgttttatttgaaa 39
>RF01062;MIR812;AAAA02004256.1/11499-11667 39946:Oryza sativa Indica
Group
Length = 169
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||| ||||||||||||||||||| ||||||||| || || |||||||||||
Sbjct: 169 gtttctgcgcccaactttgatcgtctgtcttatttaaattttttttatgattagtatttt 110
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtg 112
| |||||||||||| |||||| |||||||||||||||||||||
Sbjct: 109 ta-ttgttatgagatgataaaacatgaatagtactttactcgtg 67
>RF01062;MIR812;AP008207.1/14616063-14615893 39947:Oryza sativa
Japonica Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||| ||| ||||| | ||||||| ||||||||
Sbjct: 160 caactttgatcgtccgtcttattt-aaaattttttataatcaatattttta-ttgttatg 103
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| ||||||||||||||||||||||||||||
Sbjct: 102 agatgataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AP008216.1/11453914-11453749 39947:Oryza sativa
Japonica Group
Length = 166
Score = 85.7 bits (43), Expect = 2e-16
Identities = 87/101 (86%), Gaps = 6/101 (5%)
Strand = Plus / Minus
Query: 18 cccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtta 77
||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||
Sbjct: 157 cccaattttgatcgtctgtcttatttgaaatt-----ataattagtattttt-gttgtta 104
Query: 78 tgagataataaaatatgaatagtactttactcgtgacttat 118
||||||||||||| || ||| ||| ||||||||||||||||
Sbjct: 103 tgagataataaaacataaatcgtattttactcgtgacttat 63
Score = 58.0 bits (29), Expect = 5e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 19 ccaactttgatcgtccgtcttatttgaaa 47
|||||||||||||||||||||||||||||
Sbjct: 11 ccaactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02014561.1/49583-49410 39946:Oryza sativa Indica
Group
Length = 174
Score = 85.7 bits (43), Expect = 2e-16
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtatttttt-gttgttatg 79
|||||||||| ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 162 aactttgatcatccgtcttatttgaa-tttttttataattagtatttttttgttgttatg 104
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| ||||||||| |||||||||||||| || |||||||
Sbjct: 103 agatgataaaatattaatagtactttacttgttacttatg 64
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 148 ataagacgaacggttaaagttggacgcggaaaac 181
|||||||| ||| ||||||||||||| |||||||
Sbjct: 34 ataagacggacgattaaagttggacggggaaaac 1
>RF01062;MIR812;AC132483.2/71128-71287 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 82/96 (85%), Gaps = 1/96 (1%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagat 83
|||||| |||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 145 tttgattgtccgtcttatttgaattttttttataattagtattttt-gttgttatgagat 87
Query: 84 aataaaatatgaatagtactttactcgtgacttatg 119
|||||| |||||||||| ||||||| |||||||||
Sbjct: 86 gataaaacatgaatagtattttactcatgacttatg 51
>RF01062;MIR812;AACV01022357.1/25126-24956 39947:Oryza sativa
Japonica Group
Length = 171
Score = 85.7 bits (43), Expect = 2e-16
Identities = 59/63 (93%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 57 aattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 124 aattagtattttt-gttgttatgagatgataaaacatgaatactactttactcgtgactt 66
Query: 117 atg 119
|||
Sbjct: 65 atg 63
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaagttggacgcg 175
||||||||||||| ||| |||||||||||||
Sbjct: 136 taaataagacgaaaggtaaaagttggacgcg 166
>RF01062;MIR812;AAAA02017459.1/30794-30625 39946:Oryza sativa Indica
Group
Length = 170
Score = 85.7 bits (43), Expect = 2e-16
Identities = 88/104 (84%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 16 cgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgt 75
||||||| ||||||||| |||||||||| ||| ||||||||||||||| |||||
Sbjct: 163 cgcccaaatttgatcgttcgtcttatttaaaatttttttataattagtattttt-gttgt 105
Query: 76 tatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||| |||||| || ||||||| |||| ||||||||||||
Sbjct: 104 tatgagatgataaaacataaatagtattttattcgtgacttatg 61
>RF01062;MIR812;AAAA02026120.1/249-420 39946:Oryza sativa Indica
Group
Length = 172
Score = 85.7 bits (43), Expect = 2e-16
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 116 tttttattgttatgagatgataaaatatgaatagtactttactcgtgactt 66
>RF01058;MIR806;AAAA02009876.1/3121-2881 39946:Oryza sativa Indica
Group
Length = 241
Score = 85.7 bits (43), Expect = 2e-16
Identities = 85/100 (85%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||||||| ||||||| ||||| ||||||||
Sbjct: 47 caactttgatcgtccgtcttatttgaaatttttttataattatcattttg-gttgttata 105
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||||||||| | ||||||||||||||||||||
Sbjct: 106 agatgataaaatatgaacaatactttactcgtgacttatg 145
Score = 54.0 bits (27), Expect = 7e-07
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1 agtcataagtttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| | |||||||| |||||||||||| | ||||||||||||||
Sbjct: 214 agtcatgattttccgcgtccaactttgatcattcgtcttatttgaaa 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||||| | | ||||||||||||||||||
Sbjct: 172 aaataagacgaatgatcaaagttggacgcggaaaa 206
>RF01062;MIR812;AAAA02007969.1/1558-1388 39946:Oryza sativa Indica
Group
Length = 171
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 116 tttttgttgttataagatgataaaacatgaatagtactttactcgtgacttatg 63
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
||||||||||||||||||||||| | ||||||||||
Sbjct: 36 aaataagacgaacggttaaagttaggcgcggaaaac 1
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||||| |||||| | ||| ||||||||||||||
Sbjct: 3 tttccgcgcctaactttaaccgttcgtcttatttgaaa 40
>RF01062;MIR812;AC073392.3/147171-147000 4530:Oryza sativa (rice)
Length = 172
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||||||||||| ||||| ||| |||||||||| |||||||| |||||
Sbjct: 172 gtttccgcgcccaactttaatcgttcgttttatttgaaatttttttataattagcatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||| |||| |||||| || ||||||||||| |||||||||||||
Sbjct: 112 t-gttgttacaagatgataaaacataaatagtactttcctcgtgacttatg 63
>RF01062;MIR812;AACV01014922.1/7749-7919 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 116 tttttgttgttatgagataataaaatatgaatagtactttatatgtgacttatg 63
>RF01062;MIR812;AACV01007418.1/3561-3398 39947:Oryza sativa Japonica
Group
Length = 164
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 109 tttttattgttatgagatgataaaacatgaatagtactttactcgtgacttatg 56
>RF01062;MIR812;AP008213.1/23885583-23885754 39947:Oryza sativa
Japonica Group
Length = 172
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||| |||||||| ||||| |||||||||| ||| |||||| |||||||
Sbjct: 172 gtttccgcatccaactttaatcgttcgtcttatttaaaaattttttataatttgtatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||| |||||| |||||||||||||||||||| |||||||
Sbjct: 112 ta-ttgttatgagatgataaaacatgaatagtactttactcgtaacttatg 63
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaagttggacgcggaaa 179
||||||||||||||| ||||||||||| |||||||
Sbjct: 137 taaataagacgaacgattaaagttggatgcggaaa 171
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 cccaactttgatcgtccgtcttatttgaaa 47
||||||||| | ||||||||||||||||||
Sbjct: 10 cccaactttaaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AP008210.1/18494792-18494961 39947:Oryza sativa
Japonica Group
Length = 170
Score = 83.8 bits (42), Expect = 8e-16
Identities = 95/111 (85%), Gaps = 3/111 (2%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||||| |||||||||||||||||||||||| || |||||||| | |||
Sbjct: 170 gtttccgcgcctaactttgatcgtccgtcttatttg-aatttttttataattagca-ttt 113
Query: 69 ttgttgttatgagataataaaa-tatgaatagtactttactcgtgacttat 118
|||||||||| |||| |||||| ||||||| |||||||||||||||||||
Sbjct: 112 ttgttgttattagatgataaaaccatgaataatactttactcgtgacttat 62
>RF01062;MIR812;AC136148.2/41090-41260 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| ||||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 171 gtttccgcgtccaactttgatcgtctgtcttatttgaaatgtttttataattagca-ttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||| |||||||| |||| | ||||||| ||||||||| |||| |||||
Sbjct: 112 ttgttgctatgagatgataacacatgaataatactttacttgtgagttatg 62
>RF01062;MIR812;AP008207.1/26364722-26364890 39947:Oryza sativa
Japonica Group
Length = 169
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | ||||||||||| ||| || |||||||||| ||||||| ||||||
Sbjct: 169 gtttccgtgtccaactttgatagtctgttttatttgaaatttttttataattaatatttt 110
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||| |||| |||||| ||||||||||||||||||||||||||||
Sbjct: 109 ta-ttgttataagatgataaaacatgaatagtactttactcgtgacttatg 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||| || ||||||||||||||||||||||
Sbjct: 36 taaataagacaaatggttaaagttggacgcggaaaa 1
>RF01062;MIR812;AP008218.1/20042680-20042512 39947:Oryza sativa
Japonica Group
Length = 169
Score = 83.8 bits (42), Expect = 8e-16
Identities = 94/111 (84%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||| ||||||| ||||||| |||||||| ||| ||||||||||| ||
Sbjct: 169 gttttcgcgctcaacttttatcgtccatcttattt-aaatttttttataattagtatatt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct: 110 t-gttgttatgaaatgataaaatataaatagtactttactcgtgacttatg 61
>RF01062;MIR812;AY946410.1/199-31 4530:Oryza sativa (rice)
Length = 169
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||| ||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 169 gtttccgcgctcaactttgatcgtccgttctacttgaattttttttataattagtatttt 110
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 109 ta-ttgttatgagatgataaaacgtgaatagtactttgctcgtgacttatg 60
>RF01062;MIR812;AP002541.2/74846-75005 39947:Oryza sativa Japonica
Group
Length = 160
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| |||| |||| ||||||||| |||||||||| ||| ||||||||||||||
Sbjct: 160 gttttcgcgtccaattttgatcgttcgtcttatttaaaagttttttataattagtatttt 101
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| |||||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 100 t-gttattatgagaggataaaatatgaatagcactttactcgtgatttatg 51
>RF01062;MIR812;CR855125.1/94683-94855 4530:Oryza sativa (rice)
Length = 173
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct: 116 tttttgttgttatgaaatgataaaacatgaatagtactttactcgtgacttatg 63
>RF01062;MIR812;AACV01021279.1/8207-8378 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| | || |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 172 gtttccgcgtctaattttgatcgtccgtcttatttaaaattgttttataattagtatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||| ||||||| |||||| ||||||||||||||| |||||||||||
Sbjct: 112 ta-ttgtcatgagatgataaaacatgaatagtactttatacgtgacttatg 63
>RF01062;MIR812;CR855047.1/68417-68246 4530:Oryza sativa (rice)
Length = 172
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||| |||||||||| || |||||||||| |||||||| |||||
Sbjct: 172 gttttcgcgcccaattttgatcgtctgttttatttgaaaattttttataattagcatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| |||| |||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 112 t-gttattataagatgataaaacatgaataatactttactcgtgacttatg 63
>RF01062;MIR812;AACV01017339.1/8113-8283 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 115 tttttgttgttatgagatgataaagcatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AP008214.1/15379618-15379788 39947:Oryza sativa
Japonica Group
Length = 171
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | |||||||| |||||||||||||||| ||| || |||||||||||
Sbjct: 171 gtttccgtgtccaactttaatcgtccgtcttatttaaaatttttttatgattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct: 111 ta-ttgttattagatgataaaatatgaatagtactttatgcgtgacttatg 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaagttggacgcggaaa 179
||||||||||| ||| |||||||||||| ||||||
Sbjct: 136 taaataagacggacgattaaagttggacacggaaa 170
>RF01062;MIR812;AAAA02013629.1/5990-6158 39946:Oryza sativa Indica
Group
Length = 169
Score = 83.8 bits (42), Expect = 8e-16
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 124 ataattagtattttt-gttgttatgagatgataaaacatgaataatactttactcgtgac 66
Query: 115 tt 116
||
Sbjct: 65 tt 64
>RF01062;MIR812;AP008209.1/5420310-5420125 39947:Oryza sativa
Japonica Group
Length = 186
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| ||| |||| ||| ||||| ||| |||||||||| |||||||||||||
Sbjct: 186 agtttctgcgtccaattttaatcgttcgttttatttgaaatttttttataattagtattt 127
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
|| |||||||||||| |||||| || ||||||||||||||||||||||||
Sbjct: 126 tta-ttgttatgagatgataaaacataaatagtactttactcgtgacttat 77
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| |||||||||| ||||| ||||||||||||
Sbjct: 3 tttccgcgtccaactttgaccgtccatcttatttgaaa 40
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||| | ||||| |||||||||||||||||||
Sbjct: 36 aaataagatggacggtcaaagttggacgcggaaaac 1
>RF01062;MIR812;AP005685.3/37016-36858 39947:Oryza sativa Japonica
Group
Length = 159
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 105 tttttgttgttatgagatgataaaacatgaatagtactttactcatgacttatg 52
>RF01062;MIR812;AP008210.1/21737711-21737871 39947:Oryza sativa
Japonica Group
Length = 161
Score = 83.8 bits (42), Expect = 8e-16
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||| |||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 145 aactttgatcatccgtcttatttgaaatttttttataattagtattttt-gctgttatga 87
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||| |||||||| ||||||||||
Sbjct: 86 gatgataaaacatgaataacactttacttgtgacttatg 48
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 ccaactttgatcgtccgtcttatttgaa 46
|||||||||| |||||||||||||||||
Sbjct: 11 ccaactttgaacgtccgtcttatttgaa 38
>RF01062;MIR812;AACV01001141.1/8371-8200 39947:Oryza sativa Japonica
Group
Length = 172
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||| || ||||||||||||||||||||||||| |||||||||
Sbjct: 116 tttttgttgttatgaaatgataaaatatgaatagtactttactcatgacttatg 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaac 181
||||||||| |||||||||||||||| |||| |||||
Sbjct: 37 taaataagatgaacggttaaagttgggcgcgaaaaac 1
>RF01062;MIR812;AAAA02022985.1/2863-2691 39946:Oryza sativa Indica
Group
Length = 173
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| |||||||||||||||||||| |||||||
Sbjct: 116 tttttgttgttatgagatgataaaacatgaatagtactttactcgtcacttatg 63
>RF01062;MIR812;AP008210.1/28196407-28196576 39947:Oryza sativa
Japonica Group
Length = 170
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 113 tttttgttgttatgagatgataaaacatgaatagtactttaatcgtgacttatg 60
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||||||||| |||||
Sbjct: 35 aaataagacgaacggttaaagttggacgcagaaaa 1
>RF01062;MIR812;AACV01003457.1/7358-7188 39947:Oryza sativa Japonica
Group
Length = 171
Score = 83.8 bits (42), Expect = 8e-16
Identities = 87/103 (84%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 17 gcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtt 76
|||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct: 163 gcccaactttgatcatccgtcttatttgaactttttttataattagtatttttc-ttgtt 105
Query: 77 atgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||| |||||| ||||||||||||||| ||| |||||||
Sbjct: 104 atgagatgataaaacatgaatagtactttatgcgtaacttatg 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttga 45
|||||| |||||||||| ||||||||||||||||||
Sbjct: 2 tttccgtgcccaactttaatcgtccgtcttatttga 37
>RF01062;MIR812;AP008208.1/8960133-8959964 39947:Oryza sativa
Japonica Group
Length = 170
Score = 83.8 bits (42), Expect = 8e-16
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 158 aactttaatcgtccgtcttatttgaaaattttttataattaatattttt-gttgttatga 100
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| ||||||||| |||||||||||| ||||| |||||
Sbjct: 99 gatgataaaatattaatagtactttatgcgtgatttatg 61
>RF01062;MIR812;AACV01002500.1/8556-8389 39947:Oryza sativa Japonica
Group
Length = 168
Score = 83.8 bits (42), Expect = 8e-16
Identities = 78/91 (85%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 28 atcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagataata 87
|||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||
Sbjct: 148 atcgtccgtcttatttgaaaaatttttataattaatattttt-gttgttatgagatgata 90
Query: 88 aaatatgaatagtactttactcgtgacttat 118
||| || |||| |||||||||||||||||||
Sbjct: 89 aaacataaataatactttactcgtgacttat 59
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||||| ||||||||||
Sbjct: 36 taaataagacgaacggttaaagttgaacgcggaaaa 1
>RF01062;MIR812;AAAA02005193.1/10952-10781 39946:Oryza sativa Indica
Group
Length = 172
Score = 83.8 bits (42), Expect = 8e-16
Identities = 93/111 (83%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||| | ||||||||||| |||||||||||| ||| |||||||| |||||
Sbjct: 172 gtttccgctctcaactttgatcatccgtcttatttaaaatttttttataattagcatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| |||||||| |||||| |||||||||||||| |||||||||||||
Sbjct: 112 ta-ttgctatgagatgataaaacatgaatagtactttgctcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| |||| ||||||||| ||||||||||||||
Sbjct: 2 tttccgcgtccaattttgatcgttcgtcttatttgaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||||||| | ||| ||||||||||||||
Sbjct: 35 aaataagacgaacgatcaaaattggacgcggaaaa 1
>RF01062;MIR812;AP008218.1/26666947-26666770 39947:Oryza sativa
Japonica Group
Length = 178
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| |||||||||||| ||||||||| |||||||||||||| |||||
Sbjct: 132 ataattagtattttta-ttgttatgagatgataaaatataaatagtactttacttgtgac 74
Query: 115 ttatg 119
|||||
Sbjct: 73 ttatg 69
>RF01062;MIR812;AAAA02015545.1/24306-24475 39946:Oryza sativa Indica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||| |||| || |||||||||||||||
Sbjct: 125 ataattagtattttt-gttgttatgagatgataaaacatgagtattactttactcgtgac 67
Query: 115 ttatg 119
|||||
Sbjct: 66 ttatg 62
>RF01062;MIR812;AACV01006765.1/6108-5948 39947:Oryza sativa Japonica
Group
Length = 161
Score = 81.8 bits (41), Expect = 3e-15
Identities = 83/98 (84%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
||||||| ||||| |||||||||| ||| ||||||||||||||| ||||||||
Sbjct: 150 caactttaatcgttcgtcttatttaaaattattttataattagtattttt-gttgttata 92
Query: 80 agataataaaatatgaatagtactttactcgtgactta 117
|||| ||| ||||||||||||||||||||||||||||
Sbjct: 91 agatgatatcatatgaatagtactttactcgtgactta 54
>RF01062;MIR812;AAAA02009124.1/24488-24331 39946:Oryza sativa Indica
Group
Length = 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| |||||||||||||||||||| |||||| | ||||||||||| ||
Sbjct: 112 ataattagtattttt-gttgttatgagataataaaacatgaattggactttactcgtaac 54
Query: 115 ttatg 119
|||||
Sbjct: 53 ttatg 49
>RF01062;MIR812;AC092388.5/132070-131900 39947:Oryza sativa Japonica
Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 32 tccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagataataaaat 91
|||||||||||||||| || |||||||||||| |||||||| ||||||||||||
Sbjct: 148 tccgtcttatttgaaatatttttatgattagtattttt-gttgttattagataataaaat 90
Query: 92 atgaatagtactttactcgtgactta 117
|||||||||||||||| ||||||||
Sbjct: 89 atgaatagtactttacgtgtgactta 64
>RF01062;MIR812;AACV01007528.1/40580-40750 39947:Oryza sativa
Japonica Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/110 (83%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
|||||||| |||||||||| |||||| |||||| ||| |||||||| ||||||
Sbjct: 170 tttccgcgtccaactttgactgtccgttttatttaaaatttttttataattagcattttt 111
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 110 -gttgctatgagatgataaaacatgaatagtactttacttgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||| | | ||||||||||||||||
Sbjct: 2 tttccgcgcccaactttaaccatccgtcttatttgaaa 39
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||| | |||||||||||| |||||||||
Sbjct: 35 aaataagacggatggttaaagttgggcgcggaaaa 1
>RF01062;MIR812;AAAA02004709.1/10898-10729 39946:Oryza sativa Indica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||| |||
Sbjct: 125 ataattagtattttt-gttgttatgagatgataaaacatgaataatactttactcgcgac 67
Query: 115 ttatg 119
|||||
Sbjct: 66 ttatg 62
>RF01062;MIR812;AACV01010311.1/53892-53721 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 88/103 (85%), Gaps = 2/103 (1%)
Strand = Plus / Minus
Query: 16 cgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgt 75
||||||||||||||| || ||||||||||||| |||| |||||||||| |||||
Sbjct: 168 cgcccaactttgatcctctgtcttatttgaaaaaaatt-ataaatagtattttt-gttgt 111
Query: 76 tatgagataataaaatatgaatagtactttactcgtgacttat 118
| |||||| |||||||||| |||||||||||||| ||||||||
Sbjct: 110 tgtgagatgataaaatatgtatagtactttactcatgacttat 68
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 gcccaactttgatcgtccgtcttattt 43
|||||||||||| ||||||||||||||
Sbjct: 13 gcccaactttgaccgtccgtcttattt 39
>RF01062;MIR812;AAAA02014067.1/20261-20090 39946:Oryza sativa Indica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||||||||||| |||| |||||| ||||| ||||||||||| |||||
Sbjct: 126 ataattagtattttttgttgttacgagaggataaaacatgaacagtactttacttgtgac 67
Query: 115 ttatg 119
|||||
Sbjct: 66 ttatg 62
>RF01062;MIR812;AP008216.1/19916558-19916730 39947:Oryza sativa
Japonica Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||
Sbjct: 127 ataattagtattttta-ttgttatgagatgataaaatataaatagtattttactcgtgac 69
Query: 115 ttatg 119
|||||
Sbjct: 68 ttatg 64
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| |||||| | ||||||||||||||||||
Sbjct: 6 cgcgcctaactttaaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AP008212.1/11927901-11927730 39947:Oryza sativa
Japonica Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 58 attagtattttttgttgttatgagataataaaatatgaatagtacttta 106
||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 125 attagtattttttgttgttattagatgataaaatatgaatagtacttta 77
>RF01062;MIR812;AACV01018952.1/4339-4509 39947:Oryza sativa Japonica
Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||| |||||| || ||||||||||||||||||||||| ||||||
Sbjct: 125 ataattagtattttt-gtttttatgaaatgataaaatatgaatagtactttacccgtgac 67
Query: 115 ttatg 119
|||||
Sbjct: 66 ttatg 62
>RF01062;MIR812;AP006186.3/94692-94521 39947:Oryza sativa Japonica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 126 ataattagtattttta-ttgttatgagatgataaaatatgaatagtactttatacgtgac 68
Query: 115 ttatg 119
|||||
Sbjct: 67 ttatg 63
>RF01062;MIR812;AP004764.2/33491-33662 39947:Oryza sativa Japonica
Group
Length = 172
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/102 (84%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 18 cccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtta 77
|||||||||||| ||||| |||||||||| ||||||||||||||| |||||||
Sbjct: 162 cccaactttgattatccgttttatttgaaatttttttataattagtattttt-gttgtta 104
Query: 78 tgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||| |||||| ||||||||||||||| || || ||||||
Sbjct: 103 tgagatgataaaacatgaatagtactttattcatggcttatg 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||||||||||| ||||||||||||
Sbjct: 37 taaataagacgaacggttaaagttagacgcggaaaac 1
>RF01062;MIR812;AL606626.3/62894-63049 39947:Oryza sativa Japonica
Group
Length = 156
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||||||||||||||||||| || |||
Sbjct: 110 ataattagtattttt-gttgttatgagatgataaaatatgaatagtactttatgcgcgac 52
Query: 115 ttatg 119
|||||
Sbjct: 51 ttatg 47
>RF01062;MIR812;AAAA02034548.1/4926-4743 39946:Oryza sativa Indica
Group
Length = 184
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||||||||||||||||| |||||| ||||||| | ||||||| ||||
Sbjct: 126 ataattagtattttttgttgttatgagatgataaaacatgaataatcctttacttgtgat 67
Query: 115 ttatg 119
|||||
Sbjct: 66 ttatg 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaa 47
||||||||||||||||||||||| ||||
Sbjct: 177 caactttgatcgtccgtcttattagaaa 150
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 ccgcgcccaactttgatcgtccgtcttattt 43
|||||| |||||||||||||| |||||||||
Sbjct: 5 ccgcgctcaactttgatcgtctgtcttattt 35
>RF01062;MIR812;AP008207.1/16318973-16318801 39947:Oryza sativa
Japonica Group
Length = 173
Score = 81.8 bits (41), Expect = 3e-15
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||| |||||||||||||||| ||||||| ||||||| |||||||||
Sbjct: 161 aactttgatcatccgtcttatttgaaattttttaataattaatattttta-ttgttatga 103
Query: 81 gataataaaatatgaatagtacttta 106
||| ||||||||||||||||||||||
Sbjct: 102 gatgataaaatatgaatagtacttta 77
Score = 44.1 bits (22), Expect = 7e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 actttgatcgtccgtcttattt 43
||||||||||||||||||||||
Sbjct: 15 actttgatcgtccgtcttattt 36
>RF01062;MIR812;AP008210.1/30459208-30459038 39947:Oryza sativa
Japonica Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 67 ttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 114 ttttgttgttatgagataataaaatatgaatagtattttatgcgtgacttatg 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttattt 43
||||||| |||||||||||||||||||||||||||
Sbjct: 1 gtttccgtgcccaactttgatcgtccgtcttattt 35
>RF01062;MIR812;AACV01020478.1/2846-3015 39947:Oryza sativa Japonica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 126 ataattagtattttta-ttgttatgagatgataaaatatgaatagtactttacatgtgac 68
Query: 115 ttatg 119
|||||
Sbjct: 67 ttatg 63
>RF01062;MIR812;AACV01002616.1/34373-34543 39947:Oryza sativa
Japonica Group
Length = 171
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
||||||||||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 116 tttttgttgttataagatgataaaacatgaatagtactttactcgtgacttat 64
>RF01062;MIR812;AP002818.2/18771-18602 39947:Oryza sativa Japonica
Group
Length = 170
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/110 (83%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||| ||||||| || ||||||||||||||| |||||||| |||||
Sbjct: 170 gtttccgcgctcaactttaataatccgtcttatttgaattttttttataattagcatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
| ||| |||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 110 t-gttactatgagataataaaatatgaatagtactgtactcatgacttat 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||| ||||| ||||| ||||||||||||||
Sbjct: 35 aaataagatgaacgattaaaattggacgcggaaaa 1
>RF01062;MIR812;AAAA02014444.1/6673-6511 39946:Oryza sativa Indica
Group
Length = 163
Score = 81.8 bits (41), Expect = 3e-15
Identities = 85/101 (84%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt--tgttgttat 78
|||||||||| |||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 151 aactttgatcatccgtcttatttgaaaattttttataattagtatttttgttgttgttat 92
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| ||| || |||||||| ||||||| |||||||||||
Sbjct: 91 gtgatgatacaacatgaatagcactttacccgtgacttatg 51
>RF01058;MIR806;AAAA02032480.1/10824-10585 39946:Oryza sativa Indica
Group
Length = 240
Score = 81.8 bits (41), Expect = 3e-15
Identities = 60/65 (92%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| |||||||||||| |||||| |||||||||||||||| ||||||
Sbjct: 81 ataattagtattttta-ttgttatgagatgataaaacatgaatagtactttacgcgtgac 139
Query: 115 ttatg 119
|||||
Sbjct: 140 ttatg 144
Score = 67.9 bits (34), Expect = 5e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| |||||||||||||||||||||||||||||||
Sbjct: 204 tttccgtgcccaactttgatcgtccgtcttatttgaaa 167
>RF01058;MIR806;AACV01007528.1/40785-40545 39947:Oryza sativa
Japonica Group
Length = 241
Score = 81.8 bits (41), Expect = 3e-15
Identities = 92/110 (83%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
|||||||| |||||||||| |||||| |||||| ||| |||||||| ||||||
Sbjct: 37 tttccgcgtccaactttgactgtccgttttatttaaaatttttttataattagcattttt 96
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 97 -gttgctatgagatgataaaacatgaatagtactttacttgtgacttatg 145
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||| | | ||||||||||||||||
Sbjct: 205 tttccgcgcccaactttaaccatccgtcttatttgaaa 168
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
|||||||||| | |||||||||||| |||||||||
Sbjct: 172 aaataagacggatggttaaagttgggcgcggaaaa 206
>RF01062;MIR812;AC105743.8/84786-84958 39947:Oryza sativa Japonica
Group
Length = 173
Score = 79.8 bits (40), Expect = 1e-14
Identities = 95/113 (84%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| | |||||||||||| | |||||||||||||||| |||||||||| ||
Sbjct: 173 agtttctgtgcccaactttgaacatccgtcttatttgaaaattttttataattagta-tt 115
Query: 68 tttgttgttatgagataat-aaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||| || |||| ||||| | ||||||||| ||||||||||
Sbjct: 114 tttgttgttatgagatgataaaaacatgaacaatactttacttgtgacttatg 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||| |||||| ||||||||||||||||||||
Sbjct: 3 tttccgggcccaattttgatcgtccgtcttattt 36
>RF01062;MIR812;AACV01006061.1/32591-32751 39947:Oryza sativa
Japonica Group
Length = 161
Score = 79.8 bits (40), Expect = 1e-14
Identities = 62/67 (92%), Gaps = 3/67 (4%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatag--tactttactcgtg 112
||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 116 ataattagtattttta-ttgttatgagataataaaatatgaatagtatactttactcatg 58
Query: 113 acttatg 119
|||||||
Sbjct: 57 acttatg 51
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 cgcgcccaactttgatcgtccgtcttattt 43
||||| ||||||| ||||||||||||||||
Sbjct: 6 cgcgctcaactttaatcgtccgtcttattt 35
>RF01062;MIR812;AACV01025243.1/4967-4799 39947:Oryza sativa Japonica
Group
Length = 169
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/101 (84%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
||||||||||||||||||||||||||||| || ||||||| ||||| |||||||
Sbjct: 159 ccaactttgatcgtccgtcttatttgaaatgtttttatgattagta-tttttattgttat 101
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||| ||||||| ||||||| ||||||||||
Sbjct: 100 tagataataaaacatgaataatactttatgtgtgacttatg 60
>RF01062;MIR812;AP008207.1/21491769-21491941 39947:Oryza sativa
Japonica Group
Length = 173
Score = 79.8 bits (40), Expect = 1e-14
Identities = 85/101 (84%), Gaps = 1/101 (0%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||||||| || ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 163 ccaactttgatcatctgtcttatttgaaatttttttataattagtattttt-gttgttat 105
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| |||||||| |||||| ||||||||||
Sbjct: 104 gagatgataaaacatgaatagcactttatgtgtgacttatg 64
>RF01062;MIR812;AP008207.1/36403836-36403667 39947:Oryza sativa
Japonica Group
Length = 170
Score = 79.8 bits (40), Expect = 1e-14
Identities = 88/105 (83%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| |||| |||||||||||||||||||||||| || || ||||||||||
Sbjct: 170 agtttctgcgctcaactttgatcgtccgtcttatttaaattttttttatgattagtattt 111
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtg 112
|| |||||||||||| |||||| || ||||||||||||||||||
Sbjct: 110 tta-ttgttatgagatgataaaacataaatagtactttactcgtg 67
>RF01062;MIR812;AAAA02006966.1/65891-66058 39946:Oryza sativa Indica
Group
Length = 168
Score = 79.8 bits (40), Expect = 1e-14
Identities = 92/109 (84%), Gaps = 4/109 (3%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| ||||||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 168 gttttcgcgcccaattttgatcgtccgtcttatttaaaaaaaat---taattagtatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgactta 117
| |||||||||||| |||||| ||||||| |||||||| |||||||||
Sbjct: 111 ta-ttgttatgagatgataaaacatgaatattactttacacgtgactta 64
>RF01062;MIR812;AP003488.3/64471-64314 39947:Oryza sativa Japonica
Group
Length = 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 86/101 (85%), Gaps = 2/101 (1%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
|||||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct: 148 ccaactttgatcgtccgtcttatttgaa-tttttttataattagtattttgt-ttgttat 91
Query: 79 gagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||| ||||||| || ||||||||| |||||||
Sbjct: 90 gagatgataaaacatgaatactattttactcgtaacttatg 50
>RF01062;MIR812;AACV01006911.1/363-197 39947:Oryza sativa Japonica
Group
Length = 167
Score = 79.8 bits (40), Expect = 1e-14
Identities = 79/93 (84%), Gaps = 1/93 (1%)
Strand = Plus / Minus
Query: 27 gatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagataat 86
||||||||||||||||||||| |||||||| | |||||||||||| |||| ||
Sbjct: 153 gatcgtccgtcttatttgaaatttttttataattagca-attttgttgttataagatgat 95
Query: 87 aaaatatgaatagtactttactcgtgacttatg 119
|||| ||||||| ||||||||||||||||||||
Sbjct: 94 aaaacatgaatactactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02015575.1/58033-57871 39946:Oryza sativa Indica
Group
Length = 163
Score = 77.8 bits (39), Expect = 5e-14
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 56 taattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgact 115
|||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 119 taattagtattttta-ttgttatgagataataaaatatgaatagtattttatacgtgact 61
Query: 116 tat 118
|||
Sbjct: 60 tat 58
>RF01062;MIR812;AAAA02022762.1/25747-25574 39946:Oryza sativa Indica
Group
Length = 174
Score = 77.8 bits (39), Expect = 5e-14
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| ||| |||||||||||||||| |||||||| || |||||||| | ||
Sbjct: 174 agtttcagcgtccaactttgatcgtccatcttatttaaatactttttataattagcaatt 115
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| |||||||| ||||||||||| ||||||| |||||||||||||| |||||
Sbjct: 114 tt-gttgttataagataataaaacatgaatactactttactcgtgaattatg 64
>RF01062;MIR812;AACV01002156.1/15981-15811 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 5e-14
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||||||||||||||||||||||||||| | |||||||| ||||| ||||||||
Sbjct: 160 caactttgatcgtccgtcttatttgaaatttttttacaattagta-tttttattgttatg 102
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| ||||||| || |||| |||| |||||||
Sbjct: 101 agatgataaaacatgaataatattttattcgttacttatg 62
>RF01062;MIR812;AACV01011713.1/13667-13835 39947:Oryza sativa
Japonica Group
Length = 169
Score = 77.8 bits (39), Expect = 5e-14
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
||||||| || ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 158 caactttaattgtccgtcttatttgaaaattttttataattagtattttt-gttgttata 100
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| || ||||||| |||||| ||||||||||
Sbjct: 99 agatgataaaacataaatagtaatttactagtgacttatg 60
>RF01062;MIR812;AAAA02003647.1/3308-3140 39946:Oryza sativa Indica
Group
Length = 169
Score = 77.8 bits (39), Expect = 5e-14
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 19 ccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttat 78
||||||||||||||||||||||||| ||| |||||| |||||||| |||||||
Sbjct: 159 ccaactttgatcgtccgtcttattt-aaatttttttataattggtattttta-ttgttat 102
Query: 79 gagataataaaatatgaatagtacttta 106
||||| ||||||||||||||||||||||
Sbjct: 101 gagatgataaaatatgaatagtacttta 74
>RF01062;MIR812;AACV01014495.1/46718-46548 39947:Oryza sativa
Japonica Group
Length = 171
Score = 77.8 bits (39), Expect = 5e-14
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
|||| |||||| ||| |||||||||||| ||||||| ||||||| |||| ||||
Sbjct: 160 caaccttgatcatccttcttatttgaaaattttttataattaatattttt-gttgctatg 102
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| || |||||||||||||||||||||||||
Sbjct: 101 agatgataaaacataaatagtactttactcgtgacttatg 62
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||| |||| ||| |||||| |||||||||||||
Sbjct: 1 gtttccgcgtccaattttaatcgtctgtcttatttgaaa 39
>RF01062;MIR812;AP004048.3/42552-42381 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 5e-14
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
||||||| ||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 161 caactttagtcgtccgtcttatttgaaaattttttataattagtattttt-gttgttatg 103
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||||||||| || |||||| ||||||||||
Sbjct: 102 agatgataaaatatgaacagcactttatgtgtgacttatg 63
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 tccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||| |||||||||||||||||||||||||||||||
Sbjct: 4 tccgtgcccaactttgatcgtccgtcttatttgaaa 39
>RF01062;MIR812;AACV01012067.1/1001-829 39947:Oryza sativa Japonica
Group
Length = 173
Score = 77.8 bits (39), Expect = 5e-14
Identities = 87/104 (83%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 16 cgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgt 75
|||| ||||||||||||||||||||||| ||| |||||||| |||||||| |
Sbjct: 166 cgcctaactttgatcgtccgtcttatttaaaatttttttataattag-cgtttttgttat 108
Query: 76 tatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||| |||||| |||||||||| ||| |||||||||||||
Sbjct: 107 tatgagatgataaaacatgaatagtattttgctcgtgacttatg 64
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||| |||||||| || |||||||
Sbjct: 36 aaataagacgaacggtaaaagttgggcgtggaaaac 1
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||| ||||||||||| | ||| ||||||||||||||
Sbjct: 3 tttccacgcccaacttttaccgttcgtcttatttgaaa 40
>RF01062;MIR812;AACV01003622.1/18826-18993 39947:Oryza sativa
Japonica Group
Length = 168
Score = 77.8 bits (39), Expect = 5e-14
Identities = 52/55 (94%), Gaps = 1/55 (1%)
Strand = Plus / Minus
Query: 66 tttttgttgtt-atgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 111 tttttgttgtttatgagatgataaaacatgaatagtactttactcgtgacttatg 57
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||| ||| ||||||||||||||||||||
Sbjct: 36 taaataagacgtacgattaaagttggacgcggaaaa 1
>RF01062;MIR812;AP004998.2/55548-55721 39947:Oryza sativa Japonica
Group
Length = 174
Score = 77.8 bits (39), Expect = 5e-14
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||| ||||| |||||||||| |||||||| |||||| ||||| ||||
Sbjct: 161 aactttgatcatccgttttatttgaaatttttttataattagcattttt-gttgtcatga 103
Query: 81 gataataaaatatgaatagtacttta-ctcgtgacttatg 119
|| |||||||||||||||||||||| |||||||||||||
Sbjct: 102 aatgataaaatatgaatagtactttacctcgtgacttatg 63
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||| |||||||||||||||||||
Sbjct: 36 aaataagacgaacggtcaaagttggacgcggaaaac 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| |||||||||| ||| ||||||||||||||
Sbjct: 3 tttccgcgtccaactttgaccgttcgtcttatttgaaa 40
>RF01062;MIR812;AACV01007781.1/24830-25001 39947:Oryza sativa
Japonica Group
Length = 172
Score = 77.8 bits (39), Expect = 5e-14
Identities = 93/112 (83%), Gaps = 1/112 (0%)
Strand = Plus / Minus
Query: 8 agtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattt 67
|||||| ||||| |||||||||||||||||||||||||| ||||||| | ||
Sbjct: 172 agtttcagcgcctaactttgatcgtccgtcttatttgaattttttttataattaacaatt 113
Query: 68 tttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||| |||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 112 ta-gttgttataagatgataaaacatgaatactactttactcgtgacttatg 62
>RF01062;MIR812;AP005768.3/139807-139636 39947:Oryza sativa Japonica
Group
Length = 172
Score = 77.8 bits (39), Expect = 5e-14
Identities = 94/112 (83%), Gaps = 2/112 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| ||||||||||| ||||| |||||||||||| ||||||||||||||
Sbjct: 172 gtttccacgcccaactttaatcgtttatcttatttgaaaattttgtataattagtatttt 113
Query: 69 ttgttgttatgagataataaaata-tgaatagtactttactcgtgacttatg 119
| ||||||| || || |||||| | |||||||||||||||||||||||||||
Sbjct: 112 t-gttgttaggatatgataaaaaaatgaatagtactttactcgtgacttatg 62
>RF01062;MIR812;AAAA02004773.1/6937-7109 39946:Oryza sativa Indica
Group
Length = 173
Score = 77.8 bits (39), Expect = 5e-14
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 28 atcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagataata 87
|||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||
Sbjct: 154 atcgtccgtcttatttgaaatttttttataattaatattttt-gttgttatgagatgata 96
Query: 88 aaatatgaatagtactttac 107
||| ||||||||||||||||
Sbjct: 95 aaacatgaatagtactttac 76
>RF01062;MIR812;AAAA02011074.1/102108-101937 39946:Oryza sativa
Indica Group
Length = 172
Score = 77.8 bits (39), Expect = 5e-14
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 20 caactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatg 79
||||||| ||||||||| |||||||||| ||||||||||||||| ||| | |||
Sbjct: 161 caactttaatcgtccgttttatttgaaatttttttataattagtattttt-gttct-atg 104
Query: 80 agataataaaatatgaatagtactttactcgtgacttatg 119
|||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 103 agatgataaaacatgaataatactttactcgtgacttatg 64
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaac 181
||||||||||||||||||||| || | ||||||||||
Sbjct: 37 taaataagacgaacggttaaaattaggcgcggaaaac 1
>RF01062;MIR812;AAAA02033569.1/7697-7869 39946:Oryza sativa Indica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| |||| |||||||| |||||| | |||||||||| ||||||| |||||
Sbjct: 173 gttttcgcgtccaacttttatcgtctattttatttgaaatttttttataattaacatttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||| |||||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 113 ttgttgctatgagatgataaatcatgaatagtacttttctcgtgacttatg 63
Score = 58.0 bits (29), Expect = 5e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaa 46
||||||||||||||||||| ||| |||||||||||||
Sbjct: 3 tttccgcgcccaactttgaccgttcgtcttatttgaa 39
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||| |||||||| ||||||||||
Sbjct: 36 aaataagacgaacggtcaaagttgggcgcggaaaac 1
>RF01062;MIR812;AACV01017406.1/31277-31108 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| |||||||||||||||| ||||||||||
Sbjct: 115 tttttgttgttatgagatgataaaacatgaatagtactttacaagtgacttatg 62
>RF01062;MIR812;AP005175.4/49171-49011 39947:Oryza sativa Japonica
Group
Length = 161
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 57 aattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgactt 116
||||||||||||| ||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 113 aattagtattttta-ttgttatgatatgataaaacatgaatagtactttactcgtgactt 55
Query: 117 at 118
||
Sbjct: 54 at 53
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||||||||||| |||||| ||||||||||||||
Sbjct: 3 tttccgcgcccaacttcgatcgttcgtcttatttgaaa 40
>RF01062;MIR812;AP003314.3/74968-74797 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||| |||||| ||||||| ||||||||||||||||||||
Sbjct: 117 tttttattgttatgagatgataaaacatgaatattactttactcgtgacttatg 64
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||||| ||||||||||||||||||| |||||||||
Sbjct: 2 tttccgcgaccaactttgatcgtccgtcatatttgaaa 39
>RF01062;MIR812;AACV01025420.1/209-362 39947:Oryza sativa Japonica
Group
Length = 154
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
||||||||||||| ||||||||| ||| ||||||||||||||| |||||||||
Sbjct: 142 aactttgatcgtctgtcttatttaaaatttttttataattagtattttta-ttgttatga 84
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||| ||| |||||||||||||||||
Sbjct: 83 gatgataaaacatgaacagttttttactcgtgacttatg 45
>RF01062;MIR812;AAAA02021742.1/8892-8725 39946:Oryza sativa Indica
Group
Length = 168
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| || ||||||||||| |||||||||||| ||| |||||||| |||||
Sbjct: 168 gtttccacgtccaactttgattatccgtcttatttaaaatttttttataattagcatttt 109
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||||||||||| || |||| ||||||||| |||| |||||
Sbjct: 108 t-gttgttatgagataataaaacataaatattactttacttgtgatttatg 59
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||| | |||||||||
Sbjct: 35 aaataagacgaacggttaaagttaggcgcggaaaa 1
>RF01062;MIR812;AAAA02020785.1/3441-3270 39946:Oryza sativa Indica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||||||||||||||| ||||||| |||||||| ||| |||||||||| ||
Sbjct: 172 gtttccgcgcccaactttaatcgtccatcttatttaaaatttttttttaattagtat-tt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||| |||| |||||| ||||||| || ||||||||| |||||||
Sbjct: 113 ttgttattataagatgataaaacatgaataatattttactcgtaacttatg 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaa 46
|||||||| ||||||||| |||||||||||||||||
Sbjct: 2 tttccgcgttcaactttgaccgtccgtcttatttgaa 38
>RF01062;MIR812;AP008218.1/23369827-23369655 39947:Oryza sativa
Japonica Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | |||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 173 gtttccgtgtccaattttgatcgtccgtcttatttgaattctttttataattagtatttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||| |||| |||||| ||||| | |||||||||| ||||||||
Sbjct: 113 t-gttgttatcagatgataaaacatgaacattactttactcacgacttatg 64
>RF01062;MIR812;AL713933.6/57817-57645 4530:Oryza sativa (rice)
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 60/66 (90%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtac-tttactcgtga 113
||||||| ||||||||||| |||||||| |||||| ||||||||||| |||||||||||
Sbjct: 127 ataattaacattttttgttgctatgagatgataaaacatgaatagtacttttactcgtga 68
Query: 114 cttatg 119
||||||
Sbjct: 67 cttatg 62
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||| |||||||| |||||||||
Sbjct: 36 taaataagacgaacggtcaaagttgggcgcggaaaa 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
||||||||||||||||||| ||| ||||||||||
Sbjct: 2 tttccgcgcccaactttgaccgttcgtcttattt 35
>RF01062;MIR812;AP008207.1/9692047-9691888 39947:Oryza sativa
Japonica Group
Length = 160
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 24 tttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatgagat 83
|||||||||||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct: 145 tttgatcgtccgtcttatttgaaatttttttataattaatattttt-gttgttatgagat 87
Query: 84 aataaaatatgaatagtacttta 106
|||||| |||||||||| ||||
Sbjct: 86 gataaaacatgaatagtatttta 64
>RF01062;MIR812;AACV01023650.1/6583-6755 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
|||||||||||||| ||||||||||||| |||||| ||||||| ||||||||| |||||
Sbjct: 125 ataattagtatttt--gttgttatgagatgataaaacatgaataatactttacttgtgac 68
Query: 115 ttatg 119
|||||
Sbjct: 67 ttatg 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 142 ttataaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||| | |||||||||| ||||||| ||||
Sbjct: 40 ttataaataagacggatggttaaagttagacgcggtaaac 1
>RF01062;MIR812;AAAA02010446.1/17902-18064 39946:Oryza sativa Indica
Group
Length = 163
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||| |||||| ||||||||||||||| ||||||||||||
Sbjct: 108 tttttattgttatgagatgataaaacatgaatagtactttattcgtgacttatg 55
>RF01062;MIR812;AP008212.1/18810223-18810054 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 93/111 (83%), Gaps = 2/111 (1%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||| | |||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 170 gtttccgtgtccaattttgatcgtccgtcttatttgaaattatttt-taattaatatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||||||||||||| |||||| ||||||| |||||||||| |||| ||||
Sbjct: 111 t-gttgttatgagatgataaaacatgaatattactttactcatgacatatg 62
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||||| |||||||||
Sbjct: 35 aaataagacgaacggttaaagttgggcgcggaaaa 1
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||| | ||| ||||||||||||||
Sbjct: 2 tttccgcgcccaactttaaccgttcgtcttatttgaaa 39
>RF01062;MIR812;AP003705.3/61480-61311 39947:Oryza sativa Japonica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||| |||||||||||||||| |||||||| | |||||||| |||| |
Sbjct: 158 aactttgatcatccgtcttatttgaaatttttttataattagca-tttttgtttttataa 100
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| ||||||| |||||||||| |||||||||
Sbjct: 99 gatgataaaacatgaataatactttactcatgacttatg 61
>RF01062;MIR812;AACV01000092.1/3731-3889 39947:Oryza sativa Japonica
Group
Length = 159
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||| ||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 105 tttttgttgttacgagatgatgaaatatgaataatactttactcgtgacttatg 52
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||||||||||||||||| |||||||||
Sbjct: 36 taaataagacgaacggttaaagttgaccgcggaaaa 1
>RF01062;MIR812;AACV01013049.1/7941-7785 39947:Oryza sativa Japonica
Group
Length = 157
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| || ||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 103 tttttattattatgagatgataaaacatgaatagtactttactcgtgacttatg 50
>RF01062;MIR812;AAAA02011089.1/84707-84876 39946:Oryza sativa Indica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||| |||||||| |||||| |||||||||| |||||||||||||||||
Sbjct: 114 tttttgttgctatgagatgataaaacatgaatagtattttactcgtgacttatg 61
>RF01062;MIR812;AP008208.1/18863983-18864152 39947:Oryza sativa
Japonica Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| |||| |||||| ||||| |||||||||| || ||||||||||||||
Sbjct: 170 gtttccacgcctaactttaatcgttcgtcttattttaattttttttataattagtatttt 111
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||||||| |||||| ||||||||||| |||||||||| |||||
Sbjct: 110 ta-ttgttatgagatgataaaacatgaatagtacattactcgtgatttatg 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||| ||| ||||| ||||||||||||||||||
Sbjct: 36 taaataaaacggacggtcaaagttggacgcggaaaa 1
>RF01062;MIR812;AACV01016746.1/15305-15470 39947:Oryza sativa
Japonica Group
Length = 166
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/65 (90%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
|||||||||||||| |||||||||||||||||||| ||||||| |||||||| |||||
Sbjct: 120 ataattagtatttt--gttgttatgagataataaaacatgaatattactttacatgtgac 63
Query: 115 ttatg 119
|||||
Sbjct: 62 ttatg 58
>RF01062;MIR812;CR855135.1/8286-8453 4530:Oryza sativa (rice)
Length = 168
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| |||| |||||| || || ||||||||||||| ||||||||||||||
Sbjct: 168 gtttccacgcctaactttaattatctgtcttatttgaaaaatttttataattagtatttt 109
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||| ||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 108 ta-ttgttatgggatgataaagtatgaatagtactttactcgtgatttatg 59
>RF01062;MIR812;AACV01008267.1/8880-8706 39947:Oryza sativa Japonica
Group
Length = 175
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 116 tttttattgttatgagataataaaatataaatagtactttatgcgtgacttatg 63
>RF01062;MIR812;AACV01013486.1/303-473 39947:Oryza sativa Japonica
Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
||||| |||||||||| |||||| ||| ||||||||||||||| ||||||| ||
Sbjct: 159 aacttggatcgtccgtattatttaaaaactttttataattagtattttt-gttgttacga 101
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||||||||||||||||||| |||||| ||||
Sbjct: 100 gatgataaaatatgaatagtactttatgcgtgacctatg 62
>RF01062;MIR812;AP008208.1/2764819-2764990 39947:Oryza sativa
Japonica Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| |||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct: 116 tttttattgttatgagatgataaaacatggatagtactttactcgtgacttatg 63
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 cgcccaactttgatcgtccgtcttatttgaaa 47
||||||| ||||| ||||||||||||||||||
Sbjct: 8 cgcccaattttgaccgtccgtcttatttgaaa 39
>RF01062;MIR812;AAAA02002407.1/1680-1849 39946:Oryza sativa Indica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| |||| |||||||||||||||||| |||||||||| ||||||| | |||
Sbjct: 170 gttttcgcgtccaactttgatcgtccgttttatttgaaatttttttataattaaca-ttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||| |||| |||||| || |||| |||||||||||| |||||||
Sbjct: 111 ttgttgttataagatgataaaacataaataatactttactcgttacttatg 61
>RF01062;MIR812;AAAA02032780.1/1765-1595 39946:Oryza sativa Indica
Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||
Sbjct: 116 tttttgttgttataagatgataaaatatggatagtgctttactcgtgacttatg 63
>RF01062;MIR812;AC104179.1/164156-164322 4530:Oryza sativa (rice)
Length = 167
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||| ||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 115 tttttattgttatgacatgataaaatatgaatagtactttactcgtgatttatg 62
>RF01062;MIR812;AP008211.1/24592306-24592476 39947:Oryza sativa
Japonica Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 86/103 (83%), Gaps = 1/103 (0%)
Strand = Plus / Minus
Query: 17 gcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgtt 76
|||||||||||||||| |||||||| ||| ||||||||||||||| |||||
Sbjct: 163 gcccaactttgatcgtttttcttatttaaaatttttttataattagtattttta-ttgtt 105
Query: 77 atgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||| |||||| ||||||| || |||||||||||||||||
Sbjct: 104 atgagatgataaaacatgaataataatttactcgtgacttatg 62
>RF01062;MIR812;AP001366.1/19470-19642 39947:Oryza sativa Japonica
Group
Length = 173
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||| |||||||||||||||||||| ||||||| ||||||| ||| ||||||
Sbjct: 161 aactttaatcgtccgtcttatttgaaatttttttataattaatattttt-gttattatga 103
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| |||| |||||||||| |||||||||||
Sbjct: 102 gatgataaaacatgagtagtactttatgcgtgacttatg 64
>RF01062;MIR812;AP008210.1/28165092-28164921 39947:Oryza sativa
Japonica Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||| |||| |||||||||||||||||| |||||| || |||||||| |||||
Sbjct: 172 gttttcgcgtccaactttgatcgtccgttttatttaaattttttttataattagcatttt 113
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||| |||| |||||| ||| ||| ||||||||||||||||||||
Sbjct: 112 t-gttgttataagatgataaaacatggatattactttactcgtgacttatg 63
>RF01062;MIR812;AAAA02011645.1/12642-12812 39946:Oryza sativa Indica
Group
Length = 171
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
|||||| |||||||||||| | ||||||||||||| || |||||||| |||||
Sbjct: 171 gtttccacgcccaactttggttgtccgtcttatttaaattttttttataattagcatttt 112
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| ||| |||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 111 ta-ttgctatgagatgataaaacataaatagtactttactcgtgacttatg 62
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 146 aaataagacgaacggttaaagttggacgcggaaaac 181
|||||||||||||||| |||||| | ||||||||||
Sbjct: 36 aaataagacgaacggtcaaagttcggcgcggaaaac 1
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttga 45
|||||||||| |||||||| ||| ||||||||||||
Sbjct: 3 tttccgcgccgaactttgaccgttcgtcttatttga 38
>RF01062;MIR812;AP008210.1/22033800-22033629 39947:Oryza sativa
Japonica Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/99 (83%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 21 aactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgttgttatga 80
|||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||
Sbjct: 160 aactttgatcgttcgtcttatttaaaaatttgttataattagtattttt-gttgttatga 102
Query: 81 gataataaaatatgaatagtactttactcgtgacttatg 119
||| |||||| |||||| |||||||| | |||||||||
Sbjct: 101 gatgataaaacatgaatggtactttatgcatgacttatg 63
>RF01062;MIR812;AAAA02025546.1/9729-9897 39946:Oryza sativa Indica
Group
Length = 169
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||| |||| |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 114 tttttgttattataagatgataaaatatgactagtactttactcgtgacttatg 61
>RF01062;MIR812;AP006528.2/106927-106756 39947:Oryza sativa Japonica
Group
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||
Sbjct: 116 tttttgttgttatgagatgataaaacatgaataatactttacttgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 3 tttccgcacccaactttgaccgtccatcttatttgaaa 40
>RF01062;MIR812;AAAA02007218.1/82249-82418 39946:Oryza sativa Indica
Group
Length = 170
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|||||||||||||||||| |||||| ||||||| ||||||| ||||||||||||
Sbjct: 115 tttttgttgttatgagatgataaaacatgaataatactttattcgtgacttatg 62
>RF01062;MIR812;AAAA02010897.1/14831-14999 39946:Oryza sativa Indica
Group
Length = 169
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||||||||| || ||||||||| ||||||||||| |||||||||||||
Sbjct: 114 tttttgttgttatgaaatgataaaatataaatagtactttgctcgtgacttatg 61
>RF01062;MIR812;CR855240.1/66188-66017 4530:Oryza sativa (rice)
Length = 172
Score = 75.8 bits (38), Expect = 2e-13
Identities = 92/111 (82%), Gaps = 1/111 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| |||| |||||||||||||||||||||||| |||||||| | |||
Sbjct: 172 gtttccgcgtccaaatttgatcgtccgtcttatttgaaatttttttataattagca-ttt 114
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
|| |||| ||||||| ||||| ||||||| |||||||| ||||||||||
Sbjct: 113 ttattgtcatgagatgataaagcatgaataagactttacttgtgacttatg 63
Score = 50.1 bits (25), Expect = 1e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacg 173
||||||||||||||||||||| |||||||
Sbjct: 37 taaataagacgaacggttaaaattggacg 9
>RF01062;MIR812;AACV01014495.1/45963-46136 39947:Oryza sativa
Japonica Group
Length = 174
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 66 tttttgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||||||||| |||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 116 tttttgttgctatgagatgataaagcatgaatagtactttactcgtgacttatg 63
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
||||||||||||||||||| ||| | ||||||||||||
Sbjct: 3 tttccgcgcccaactttgaccgttcatcttatttgaaa 40
>RF01062;MIR812;AAAA02020502.1/3712-3537 39946:Oryza sativa Indica
Group
Length = 176
Score = 73.8 bits (37), Expect = 8e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtact 103
|||||||||||||||||||||||| |||| |||||| ||||||||||||
Sbjct: 129 ataattagtattttttgttgttattagatgataaaacatgaatagtact 81
>RF01062;MIR812;AAAA02006784.1/12953-12794 39946:Oryza sativa Indica
Group
Length = 160
Score = 73.8 bits (37), Expect = 8e-13
Identities = 91/110 (82%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttt 69
|||||||| ||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 159 tttccgcgttcaactttgatcatccgtcttatttaaaaattttttataattagtattttt 100
Query: 70 tgttgttatgagataataaaatatgaatagtactttactcgtgacttatg 119
| |||||||| || |||||| ||||||||||||||| | | ||||||||
Sbjct: 99 t-ttgttatgcaatgataaaacatgaatagtactttatttgcgacttatg 51
Score = 48.1 bits (24), Expect = 4e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 145 taaataagacgaacggttaaagttggacgcggaaaa 180
||||||||||| ||| ||||| ||||||||||||||
Sbjct: 36 taaataagacggacgattaaaattggacgcggaaaa 1
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttattt 43
|||||||| |||| ||| ||||||||||||||||
Sbjct: 2 tttccgcgtccaattttaatcgtccgtcttattt 35
>RF01062;MIR812;AAAA02030087.1/8995-9151 39946:Oryza sativa Indica
Group
Length = 157
Score = 73.8 bits (37), Expect = 8e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| ||||||
Sbjct: 113 ataattagtattttt-gttgttatgagatgataaaacatgaataatactttatgcgtgac 55
Query: 115 ttatg 119
|||||
Sbjct: 54 ttatg 50
>RF01062;MIR812;AP002908.2/109269-109442 39947:Oryza sativa Japonica
Group
Length = 174
Score = 73.8 bits (37), Expect = 8e-13
Identities = 88/106 (83%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 14 cgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtattttttgtt 73
|||||| |||||||| ||| ||||||||||||| ||||||||||| ||| |||
Sbjct: 169 cgcgcctaactttgaccgtatgtcttatttgaaaattttttataattagtatcttt-gtt 111
Query: 74 gttatgagataataaaatatgaatagtactttactcgtgacttatg 119
||| | |||| |||||| |||||||||||||||||| |||||||||
Sbjct: 110 gttgtcagatgataaaacatgaatagtactttactcttgacttatg 65
>RF01062;MIR812;AAAA02007477.1/25761-25598 39946:Oryza sativa Indica
Group
Length = 164
Score = 73.8 bits (37), Expect = 8e-13
Identities = 91/110 (82%), Gaps = 1/110 (0%)
Strand = Plus / Minus
Query: 9 gtttccgcgcccaactttgatcgtccgtcttatttgaaannnnnnnataattagtatttt 68
||||||||| |||||||| || ||||||||||||| ||| ||||||| ||||||
Sbjct: 164 gtttccgcgtccaactttaattgtccgtcttatttaaaatttttttataattaatatttt 105
Query: 69 ttgttgttatgagataataaaatatgaatagtactttactcgtgacttat 118
| |||||||||||| ||| || |||||| || |||||||||||||||||
Sbjct: 104 ta-ttgttatgagatgatacaacatgaatggtgctttactcgtgacttat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 145 taaataagacgaacggttaaagttggacgcggaaa 179
||||||||||| || |||||||||||||||||||
Sbjct: 129 taaataagacggacaattaaagttggacgcggaaa 163
Score = 44.1 bits (22), Expect = 7e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 10 tttccgcgcccaactttgatcgtccgtcttatttgaaa 47
|||||| |||||||||||| || ||||||||||||||
Sbjct: 2 tttccgtgcccaactttgaccgctcgtcttatttgaaa 39
>RF01062;MIR812;AP008208.1/17086172-17086329 39947:Oryza sativa
Japonica Group
Length = 158
Score = 73.8 bits (37), Expect = 8e-13
Identities = 57/63 (90%), Gaps = 3/63 (4%)
Strand = Plus / Minus
Query: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
|||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||||
Sbjct: 113 ataattagtattttttatt---atgagatgataaaatatgaatagtattttactcgtgac 57
Query: 115 tta 117
|||
Sbjct: 56 tta 54
