miRNEST 2.0, an integrative microRNA resource :: BLAST
>50829_osa-miRf11614-akr:pmrd
Length = 179
Score = 97.6 bits (49), Expect = 3e-21
Identities = 94/110 (85%), Gaps = 1/110 (0%)
Strand = Plus / Plus
Query: 1 ggttttcgtgttcaacgtttgactgtctatcttatatgaaaannnnnnnattagtatttt 60
||||||||||| ||||||||||||||||||||||||| | |||| ||||||
Sbjct: 5 ggttttcgtgtccaacgtttgactgtctatcttatat-atttttttataattaatatttt 63
Query: 61 tattattgttagatgataaaacatgaataatactttatgcatgacttatc 110
|||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 64 tattgctgttagatgataaaacatgattaatactttatgcatgacttatc 113
>49875_osa-miRf10660-akr:pmrd
Length = 191
Score = 97.6 bits (49), Expect = 3e-21
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 65 attagtatttttattgttgttagatgataaaacatgattaatactttatgcgtgacttat 124
Query: 110 c 110
|
Sbjct: 125 c 125
>50624_osa-miRf11409-akr:pmrd
Length = 167
Score = 89.7 bits (45), Expect = 6e-19
Identities = 92/109 (84%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 1 ggttttcgtgttcaacgtttgactgtctatcttatatgaaaannnnnnn--attagtatt 58
||||| ||||| ||||||||||||||| ||||||||||||| |||||||||
Sbjct: 3 ggtttccgtgtccaacgtttgactgtccatcttatatgaaatttttttataattagtatt 62
Query: 59 tttattattgttagatgataaaacatgaataatactttatgcatgactt 107
|||||||||||||||| ||||||||||| |||||||| |||| ||||||
Sbjct: 63 tttattattgttagataataaaacatgattaatacttaatgcgtgactt 111
>50253_osa-miRf11038-akr:pmrd
Length = 172
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 50 attagtattttcattgttgttagatgataaaacatggttaatactttatgcatgacttat 109
Query: 110 c 110
|
Sbjct: 110 c 110
>50252_osa-miRf11037-akr:pmrd
Length = 172
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 50 attagtattttcattgttgttagatgataaaacatggttaatactttatgcatgacttat 109
Query: 110 c 110
|
Sbjct: 110 c 110
>50251_osa-miRf11036-akr:pmrd
Length = 179
Score = 89.7 bits (45), Expect = 6e-19
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 54 attagtattttcattgttgttagatgataaaacatggttaatactttatgcatgacttat 113
Query: 110 c 110
|
Sbjct: 114 c 114
>50503_osa-miRf11288-akr:pmrd
Length = 176
Score = 83.8 bits (42), Expect = 4e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 53 attagtattttcattgttgttagatgataaaacatgattaatactttatgcgtgactt 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 ggttttcgtgttcaacgtttgactgtctatcttatatgaaaa 42
||||| ||||| ||||||||||||||| |||||| ||||||
Sbjct: 175 ggtttccgtgtccaacgtttgactgtccgtcttatttgaaaa 134
>49051_osa-miR812d:pmrd
Length = 153
Score = 83.8 bits (42), Expect = 4e-17
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||||
Sbjct: 110 attagtatttttattgttcttatatgataaaacatgaataatactttatgcgtgactt 53
>49050_osa-miR812c:pmrd
Length = 164
Score = 83.8 bits (42), Expect = 4e-17
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 60 ttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
|||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 103 ttattattgttaaatgataaaacatgaataatattttatgcatgacttat 54
>50576_osa-miRf11361-akr:pmrd
Length = 179
Score = 81.8 bits (41), Expect = 2e-16
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| ||| |||||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 54 attagtattttcattgttgttagatgataaaatatgattaatactttatgcgtgacttat 113
Query: 110 c 110
|
Sbjct: 114 c 114
>49729_osa-miRf10514-akr:pmrd
Length = 173
Score = 81.8 bits (41), Expect = 2e-16
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| ||| ||||||||||||||||||||| ||| ||||||||| ||||||||
Sbjct: 51 attagtattttcattgttgttagatgataaaacatgattaacactttatgcgtgacttat 110
Query: 110 c 110
|
Sbjct: 111 c 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 7 cgtgttcaacgtttgactgtctatcttatatgaaaa 42
||||| ||||||||||| ||| ||||||| ||||||
Sbjct: 167 cgtgtccaacgtttgaccgtccatcttatttgaaaa 132
>49049_osa-miR812b:pmrd
Length = 170
Score = 81.8 bits (41), Expect = 2e-16
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgact 106
||||||||||||||| || ||||||||||||||||||||| |||||||||| |||||
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatattactttatgcgtgact 64
>50468_osa-miRf11253-akr:pmrd
Length = 177
Score = 77.8 bits (39), Expect = 2e-15
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatga 104
|||| |||||| ||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 52 attaatattttcattgttgttagatgataaaacatgattaatactttatgcatga 106
>51125_osa-miRf11910-akr:pmrd
Length = 174
Score = 75.8 bits (38), Expect = 1e-14
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaaca-tgaataatactttatgcatgactta 108
||||||||||||||| |||||||||||||||||| ||| ||||||||||||| ||| |||
Sbjct: 51 attagtatttttattgttgttagatgataaaacattgattaatactttatgcgtgattta 110
Query: 109 tc 110
||
Sbjct: 111 tc 112
>50423_osa-miRf11208-akr:pmrd
Length = 175
Score = 75.8 bits (38), Expect = 1e-14
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||| ||| |||||||||||||||| |||| ||||||||||||| ||||||
Sbjct: 52 attagtattttcattgttgttagatgataaaatatgattaatactttatgcgtgactt 109
>51166_osa-miRf11951-akr:pmrd
Length = 174
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| |||||| ||||||||||||| |||||||||| || |||||||| ||||
Sbjct: 123 attagtattttcattatttttagatgataaaatatgaataatatttcatgcatgatttat 64
Query: 110 c 110
|
Sbjct: 63 c 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 137 aaataaaatgaacggtcaaatgttagacacggaaac 172
|||||| ||| ||||||||| |||||||||||||||
Sbjct: 36 aaataagatggacggtcaaacgttagacacggaaac 1
>50479_osa-miRf11264-akr:pmrd
Length = 175
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||||||| || |||||||||||||||| |||| ||||||||||||| ||||||||
Sbjct: 51 attagtattttcgttgttgttagatgataaaaaatgattaatactttatgcgtgacttat 110
Query: 110 c 110
|
Sbjct: 111 c 111
>51120_osa-miRf11905-akr:pmrd
Length = 174
Score = 71.9 bits (36), Expect = 2e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 63 ttattgttagatgataaaacatgaataatactttatgcatgacttatc 110
|||||||||||||||||||||||| ||||||||||| | |||||||||
Sbjct: 64 ttattgttagatgataaaacatgattaatactttatacgtgacttatc 111
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1 ggttttcgtgttcaacgtttgactgtctatcttatatgaaaa 42
||||||||||| ||||||||||| ||| |||||| ||||||
Sbjct: 174 ggttttcgtgtccaacgtttgaccgtccgtcttatttgaaaa 133
>50950_osa-miRf11735-akr:pmrd
Length = 185
Score = 67.9 bits (34), Expect = 2e-12
Identities = 53/58 (91%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||| ||| |||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 59 attagtattttcattgttgttagatgat-aaacatgattaatactttatgcgtgactt 115
>50597_osa-miRf11382-akr:pmrd
Length = 178
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 54 gtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||| ||||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct: 121 gtatttttattgttgttagattataaaacatgattaatattttatgcgtgactt 68
>49057_osa-miR812j:pmrd
Length = 297
Score = 67.9 bits (34), Expect = 2e-12
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||||||||||| || |||||| |||||||||||||| || ||||||| ||||||
Sbjct: 181 attagtatttttattgttattagattataaaacatgaatagtagtttatgcgtgactt 124
>48793_obt-miR812:pmrd
Length = 175
Score = 65.9 bits (33), Expect = 9e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 55 tatttttattattgttagatgataaaacatgaataatactttatg 99
|||||||||| || ||||||||||||||||||||| |||||||||
Sbjct: 120 tatttttattgttattagatgataaaacatgaatagtactttatg 76
>49549_osa-miRf10334-akr:pmrd
Length = 162
Score = 63.9 bits (32), Expect = 4e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
|||||| |||| ||| |||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 51 attagtgttttcattgttgttagatgataaaacatgtttaatactttatgcgtcacttat 110
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 137 aaataaaatgaacggtcaaatgttagacacggaaac 172
|||||||| | ||||||||||||| |||| ||||||
Sbjct: 126 aaataaaacggacggtcaaatgttggacatggaaac 161
>50030_osa-miRf10815-akr:pmrd
Length = 175
Score = 60.0 bits (30), Expect = 6e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 54 gtatttttattattgttagatgataaaacatgaataatactttatgcatgactt 107
||||||| ||| ||||||||||||||||||||| ||||| ||||| | ||||||
Sbjct: 55 gtattttcattgttgttagatgataaaacatgattaatattttatacgtgactt 108
>49912_osa-miRf10697-akr:pmrd
Length = 183
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 73 atgataaaacatgaataatactttatgcatgacttatc 110
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 84 atgataaaacatgattaatactttatgcgtgacttatc 121
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatga 86
||||||||||| ||| |||||||||||||||||||||
Sbjct: 51 attagtattttcattgttgttagatgataaaacatga 87
>49911_osa-miRf10696-akr:pmrd
Length = 185
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 73 atgataaaacatgaataatactttatgcatgacttatc 110
|||||||||||||| ||||||||||||| |||||||||
Sbjct: 101 atgataaaacatgattaatactttatgcgtgacttatc 64
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatga 86
||||||||||| ||| |||||||||||||||||||||
Sbjct: 134 attagtattttcattgttgttagatgataaaacatga 98
>49056_osa-miR812i:pmrd
Length = 242
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 77 taaaacatgaataatactttatgcatgacttat 109
||||||||||||| |||||||||||||||||||
Sbjct: 110 taaaacatgaatattactttatgcatgacttat 142
>49052_osa-miR812e:pmrd
Length = 170
Score = 54.0 bits (27), Expect = 4e-08
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgactta 108
|||| |||||||||| || ||||||||||||| || |||| ||||| |||| |||||||
Sbjct: 48 attactatttttattgttattagatgataaaatataaatattacttcatgcgtgactta 106
>48800_oru-miR812:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgc 100
|||| |||||||||| | |||||||||||||||| |||| ||||||||||
Sbjct: 124 attattatttttattgctattagatgataaaacataaatagtactttatgc 74
>49048_osa-miR812a:pmrd
Length = 234
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatg 99
|||| |||||||||| || ||| ||||||||||||||||| || ||||||
Sbjct: 82 attactatttttattgttattacatgataaaacatgaatagtattttatg 131
>50654_osa-miRf11439-akr:pmrd
Length = 173
Score = 50.1 bits (25), Expect = 6e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 50 attagtatttttattattgttagatgataaaacatgaataatactttatgcatgacttat 109
||||||| ||| ||| ||||||||||||||| |||| ||| ||||||| | ||||||||
Sbjct: 51 attagtactttcattgttgttagatgataaatcatggttaacactttatacgtgacttat 110
Query: 110 c 110
|
Sbjct: 111 c 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 caacgtttgactgtctatcttatatgaa 40
||||||||||||||| ||||||||||||
Sbjct: 12 caacgtttgactgtccatcttatatgaa 39
>49054_osa-miR812g:pmrd
Length = 242
Score = 46.1 bits (23), Expect = 9e-06
Identities = 53/62 (85%), Gaps = 2/62 (3%)
Strand = Plus / Minus
Query: 50 attagtatttttattattgttagatgataaaacatgaata--atactttatgcatgactt 107
||||||||||||||| || | |||| |||||| ||||||| |||||||| ||||||||
Sbjct: 155 attagtatttttattgttatgagataataaaatatgaatagtatactttactcatgactt 96
Query: 108 at 109
||
Sbjct: 95 at 94
>48792_obr-miR812:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 69 ttagatgataaaacatgaataatactttatg 99
|||||||||||| |||||||| |||||||||
Sbjct: 104 ttagatgataaatcatgaatagtactttatg 74
