miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP002485.2/92019-92165 39947:Oryza sativa Japonica
Group
Length = 147
Score = 147 bits (74), Expect = 2e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctggacatgaagattcgttgtactataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 accggacgagacacttcatagtacaacgaatctggacatgaagattcgttgtactataaa 97
Query: 61 gtgtctcgtctggt 74
||||||||||||||
Sbjct: 98 gtgtctcgtctggt 111
Score = 67.9 bits (34), Expect = 2e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 5 gacgagacacttcatagtacaacgaatctggacatgaagattcgttgtactataaagtgt 64
|||||||||||| |||||||||||||||| | | |||||||||||||||| ||||||
Sbjct: 107 gacgagacactttatagtacaacgaatcttcatgtccagattcgttgtactatgaagtgt 48
Query: 65 ctcgtc 70
||||||
Sbjct: 47 ctcgtc 42
>RF00906;MIR1122;AP002908.2/68380-68536 39947:Oryza sativa
Japonica Group
Length = 157
Score = 75.8 bits (38), Expect = 7e-14
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
||||||||||||||||||||||||||||||||||||||
Sbjct: 38 accggacgagacacttcatagtacaacgaatctggaca 75
Score = 58.0 bits (29), Expect = 2e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggaca 38
|||||||||||||||||||||||||||||
Sbjct: 111 gacacttcatagtacaacgaatctggaca 83
>RF00906;MIR1122;AP004031.3/125858-125981 39947:Oryza sativa
Japonica Group
Length = 124
Score = 71.9 bits (36), Expect = 1e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggacatg 40
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 87 accggacgagacatttcatagtacaacgaatctggacatg 48
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 42 agattcgttgtactataaagtgtctcgtc 70
|||||||||||||||| || |||||||||
Sbjct: 55 agattcgttgtactatgaaatgtctcgtc 83
>RF00906;MIR1122;AAAA02020247.1/9682-9526 39946:Oryza sativa
Indica Group
Length = 157
Score = 69.9 bits (35), Expect = 4e-12
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctggacatgaag 43
||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 38 accggacgaaacacttcatagtacaacgaatctggacaggaag 80
Score = 46.1 bits (23), Expect = 6e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctgga 36
||||||| |||||||||||||||||||
Sbjct: 111 gacactttatagtacaacgaatctgga 85
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 42 agattcgttgtactataaagtgtctcgtc 70
|||||||||||||||| |||||| |||||
Sbjct: 70 agattcgttgtactatgaagtgtttcgtc 42
>RF00906;MIR1122;AAAA02000094.1/16089-15933 39946:Oryza sativa
Indica Group
Length = 157
Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 43 gattcgttgtactataaagtgtctcgtctggt 74
||||||||||||||||||||||||||||||||
Sbjct: 89 gattcgttgtactataaagtgtctcgtctggt 120
Score = 48.1 bits (24), Expect = 2e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 5 gacgagacacttcatagtacaacgaatc 32
|||||||||||| |||||||||||||||
Sbjct: 116 gacgagacactttatagtacaacgaatc 89
>RF00906;MIR1122;AC134256.4/172189-172345 39947:Oryza sativa
Japonica Group
Length = 157
Score = 63.9 bits (32), Expect = 3e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggacatg 40
||||||| |||||||||||||||||||||||| |||||||
Sbjct: 120 accggacaagacacttcatagtacaacgaatccggacatg 81
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaat 31
|||||| | ||||||||||||||||||||||
Sbjct: 38 accggatgtgacacttcatagtacaacgaat 68
>RF00906;MIR1122;ABRL01001053.1/5989-5833 65489:Oryza barthii
Length = 157
Score = 63.9 bits (32), Expect = 3e-10
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 5 gacgagacacttcatagtacaacgaatctggacatg 40
|||||||||||||||||||||||||||| |||||||
Sbjct: 116 gacgagacacttcatagtacaacgaatccggacatg 81
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 43 gattcgttgtactataaagtgtctcgtctg 72
||||||||||||||| ||||||||||||||
Sbjct: 89 gattcgttgtactatgaagtgtctcgtctg 118
>RF00906;MIR1122;AAAA02014936.1/13983-13869 39946:Oryza sativa
Indica Group
Length = 115
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggacat 39
|||| ||||||||||||||||||||||||||| ||||||
Sbjct: 99 accgaacgagacacttcatagtacaacgaatccggacat 61
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctgg 35
|||||| |||||||||||| |||||||||||||||
Sbjct: 17 accggatgagacacttcatggtacaacgaatctgg 51
>RF00906;MIR1122;AL606635.3/21906-21750 39947:Oryza sativa Japonica
Group
Length = 157
Score = 61.9 bits (31), Expect = 1e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggacat 39
|||| ||||||||||||||||||||||||||| ||||||
Sbjct: 120 accgaacgagacacttcatagtacaacgaatccggacat 82
Score = 54.0 bits (27), Expect = 2e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctgg 35
|||||| |||||||||||| |||||||||||||||
Sbjct: 38 accggatgagacacttcatggtacaacgaatctgg 72
>RF00906;MIR1122;EU337975.1/586-742 39946:Oryza sativa Indica Group
Length = 157
Score = 60.0 bits (30), Expect = 4e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
|||||| | |||||||||||||||||||||||||||||
Sbjct: 120 accggatgtgacacttcatagtacaacgaatctggaca 83
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatc 32
|||||||||||||||||||||||| |||||||
Sbjct: 38 accggacgagacacttcatagtaccacgaatc 69
>RF00906;MIR1122;AP008209.1/30325748-30325904 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 6e-08
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggacatg 40
|||||| | ||||||||||||||||| |||||||||||||
Sbjct: 120 accggatgtgacacttcatagtacaatgaatctggacatg 81
>RF00906;MIR1122;AACV01012603.1/10671-10517 39947:Oryza sativa
Japonica Group
Length = 155
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggacatga 41
|||||| |||||||||||||||||||||||||
Sbjct: 111 gacactacatagtacaacgaatctggacatga 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 catagtacaacgaatctggacatg 40
||||||||||||||||||||||||
Sbjct: 55 catagtacaacgaatctggacatg 78
>RF00906;MIR1122;AP003711.3/78857-78701 39947:Oryza sativa Japonica
Group
Length = 157
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatc 32
||||||||| ||||||||||||||||||||||
Sbjct: 120 accggacgaaacacttcatagtacaacgaatc 89
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggacatgaag 43
||||||| ||||||||||||||||||||| ||||
Sbjct: 47 gacactttatagtacaacgaatctggacaggaag 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 42 agattcgttgtactataaagtgtc 65
||||||||||||||||||||||||
Sbjct: 70 agattcgttgtactataaagtgtc 47
>RF00906;MIR1122;AP008207.1/915692-915536 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 6e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatc 32
||||||||||||||||||||||||||| ||||
Sbjct: 120 accggacgagacacttcatagtacaacaaatc 89
>RF00906;MIR1122;AACV01006359.1/1475-1631 39947:Oryza sativa
Japonica Group
Length = 157
Score = 56.0 bits (28), Expect = 6e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 5 gacgagacacttcatagtacaacgaatctggacatg 40
|||||||||||||||| ||||||||||| |||||||
Sbjct: 116 gacgagacacttcataatacaacgaatccggacatg 81
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 43 gattcgttgtactataaagtgtctcgtctg 72
||||||||||| ||| ||||||||||||||
Sbjct: 89 gattcgttgtattatgaagtgtctcgtctg 118
>RF00906;MIR1122;AAAA02005311.1/24621-24777 39946:Oryza sativa
Indica Group
Length = 157
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggacatg 40
||||||||||||||||| |||||||||||||
Sbjct: 111 gacacttcatagtacaatgaatctggacatg 81
>RF00906;MIR1122;AAAA02032515.1/3115-3271 39946:Oryza sativa Indica
Group
Length = 157
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaat 31
||||||||||| |||||||||||||||||||
Sbjct: 120 accggacgagatacttcatagtacaacgaat 90
>RF00906;MIR1122;AACV01003486.1/94-250 39947:Oryza sativa Japonica
Group
Length = 157
Score = 54.0 bits (27), Expect = 2e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggacatg 40
||||||||||||||||| |||||||||||||
Sbjct: 47 gacacttcatagtacaatgaatctggacatg 77
>RF00906;MIR1122;AAAA02018390.1/16986-17138 39946:Oryza sativa
Indica Group
Length = 153
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggacatgaag 43
||||||| ||||||||||||||||||||| ||||
Sbjct: 111 gacactttatagtacaacgaatctggacaagaag 78
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 4 ggacgagacacttcatagtacaacgaatctggacatg 40
|||||||||| |||||||||||| ||||| |||||||
Sbjct: 41 ggacgagacatttcatagtacaatgaatccggacatg 77
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 42 agattcgttgtactataaagtgtc 65
||||||||||||||||||||||||
Sbjct: 88 agattcgttgtactataaagtgtc 111
>RF00906;MIR1122;AAAA02033572.1/45748-45869 39946:Oryza sativa
Indica Group
Length = 122
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 ttcatagtacaacgaatctggacatg 40
||||||||||||||||||||||||||
Sbjct: 71 ttcatagtacaacgaatctggacatg 46
>RF00906;MIR1122;AC025905.3/47917-48072 4530:Oryza sativa (rice)
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 15 ttcatagtacaacgaatctggacatg 40
||||||||||||||||||||||||||
Sbjct: 105 ttcatagtacaacgaatctggacatg 80
>RF00906;MIR1122;AACV01013846.1/34700-34544 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggacatgaag 43
||||||| ||||||||||||||||||||| ||||
Sbjct: 47 gacactttatagtacaacgaatctggacaggaag 80
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 42 agattcgttgtactataaagtgtc 65
||||||||||||||||||||||||
Sbjct: 70 agattcgttgtactataaagtgtc 47
>RF00906;MIR1122;AP008216.1/17487566-17487411 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 3 cggacgagacacttcatagtacaacgaatctggacatg 40
|||||| ||||||||||||||||| ||||| |||||||
Sbjct: 117 cggacgtgacacttcatagtacaatgaatccggacatg 80
>RF00906;MIR1122;AP008212.1/7989879-7989724 39947:Oryza sativa
Japonica Group
Length = 156
Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 9 agacacttcatagtacaacgaatctggaca 38
||||| ||||||||||||||||||||||||
Sbjct: 111 agacatttcatagtacaacgaatctggaca 82
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ttcatagtacaacgaatctggacatg 40
|||||||||||| |||||||||||||
Sbjct: 52 ttcatagtacaatgaatctggacatg 77
>RF00906;MIR1122;AACV01017146.1/25916-25760 39947:Oryza sativa
Japonica Group
Length = 157
Score = 52.0 bits (26), Expect = 1e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 atagtacaacgaatctggacatgaag 43
||||||||||||||||||||||||||
Sbjct: 103 atagtacaacgaatctggacatgaag 78
>RF00906;MIR1122;AAAA02017206.1/17057-17207 39946:Oryza sativa
Indica Group
Length = 151
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 ggacgagacacttcatagtacaacgaatc 32
||||| |||||||||||||||||||||||
Sbjct: 36 ggacgggacacttcatagtacaacgaatc 64
>RF00906;MIR1122;AACV01013196.1/2181-2029 39947:Oryza sativa
Japonica Group
Length = 153
Score = 50.1 bits (25), Expect = 4e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 4 ggacgagacacttcatagtacaacgaatctggacatg 40
|||||||||| |||||||||||| ||||| |||||||
Sbjct: 113 ggacgagacatttcatagtacaatgaatccggacatg 77
Score = 44.1 bits (22), Expect = 2e-04
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggacatgaag 43
||||||| |||||| |||||||||||||| ||||
Sbjct: 43 gacactttatagtataacgaatctggacaagaag 76
>RF00906;MIR1122;AACV01012172.1/17743-17893 39947:Oryza sativa
Japonica Group
Length = 151
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 ggacgagacacttcatagtacaacgaatc 32
||||| |||||||||||||||||||||||
Sbjct: 36 ggacgggacacttcatagtacaacgaatc 64
>RF00906;MIR1122;AAAA02020328.1/21348-21502 39946:Oryza sativa
Indica Group
Length = 155
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 gagacacttcatagtacaacgaatctggacatg 40
|||||| |||||||||||| |||||||||||||
Sbjct: 45 gagacatttcatagtacaatgaatctggacatg 77
Score = 44.1 bits (22), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
||||||||||||| ||||||||| || |||||||||||
Sbjct: 118 accggacgagacatttcatagta-aatgaatctggaca 82
>RF00906;MIR1122;AAAA02034764.1/9751-9907 39946:Oryza sativa Indica
Group
Length = 157
Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 11 acacttcatagtacaacgaatctggacatgaag 43
|||||||||||||||| ||||||||||| ||||
Sbjct: 110 acacttcatagtacaatgaatctggacaggaag 78
>RF00906;MIR1122;AP003866.3/59767-59922 39947:Oryza sativa Japonica
Group
Length = 156
Score = 50.1 bits (25), Expect = 4e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 8 gagacacttcatagtacaacgaatctgga 36
|||||||||| ||||||||||||||||||
Sbjct: 112 gagacacttcctagtacaacgaatctgga 84
>RF00906;MIR1122;AP002869.1/81681-81526 39947:Oryza sativa Japonica
Group
Length = 156
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 15 ttcatagtacaacgaatctggaca 38
||||||||||||||||||||||||
Sbjct: 105 ttcatagtacaacgaatctggaca 82
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ttcatagtacaacgaatctggacatg 40
|||||||||||| |||||||||||||
Sbjct: 52 ttcatagtacaatgaatctggacatg 77
>RF00906;MIR1122;AAAA02018672.1/7033-6895 39946:Oryza sativa Indica
Group
Length = 139
Score = 48.1 bits (24), Expect = 2e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 17 catagtacaacgaatctggacatg 40
||||||||||||||||||||||||
Sbjct: 107 catagtacaacgaatctggacatg 84
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 catagtacaacgaatctggacat 39
|||||||||||||||||||||||
Sbjct: 33 catagtacaacgaatctggacat 55
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 17 catagtacaacgaatctggacatga 41
||||||||||| |||||||||||||
Sbjct: 58 catagtacaacaaatctggacatga 82
>RF00906;MIR1122;AAAA02017692.1/3609-3744 39946:Oryza sativa
Indica Group
Length = 136
Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggacatga 41
|||||| ||||||||||||||| |||||||||
Sbjct: 92 gacactacatagtacaacgaatatggacatga 61
>RF00906;MIR1122;AACV01011889.1/2622-2752 39947:Oryza sativa
Japonica Group
Length = 131
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 16 tcatagtacaacgaatctggaca 38
|||||||||||||||||||||||
Sbjct: 79 tcatagtacaacgaatctggaca 57
>RF00906;MIR1122;AP008209.1/26976879-26977035 39947:Oryza sativa
Japonica Group
Length = 157
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 13 acttcatagtacaacgaatctggacatgaag 43
|||||||| ||||||||||||||||| ||||
Sbjct: 50 acttcatattacaacgaatctggacaggaag 80
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaa 26
||||||||||| ||||||||||||||
Sbjct: 120 accggacgagatacttcatagtacaa 95
>RF00906;MIR1122;AP005826.3/13057-12891 39947:Oryza sativa Japonica
Group
Length = 167
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggacatg 40
|||| ||||||||||| ||||||||||||||
Sbjct: 122 gacatttcatagtacaccgaatctggacatg 92
>RF00906;MIR1122;AP004378.5/54695-54821 39947:Oryza sativa
Japonica Group
Length = 127
Score = 46.1 bits (23), Expect = 6e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 9 agacacttcatagtacaacgaatctggacat 39
||||| || ||||||||||||||||||||||
Sbjct: 46 agacattttatagtacaacgaatctggacat 76
Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 42 agattcgttgtactataaagtgtct 66
||||||||||||||||||| |||||
Sbjct: 70 agattcgttgtactataaaatgtct 46
>RF00906;MIR1122;AC087547.2/14662-14507 4530:Oryza sativa (rice)
Length = 156
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tagtacaacgaatctggacatga 41
|||||||||||||||||||||||
Sbjct: 58 tagtacaacgaatctggacatga 80
>RF00906;MIR1122;AP008214.1/2934446-2934579 39947:Oryza sativa
Japonica Group
Length = 134
Score = 46.1 bits (23), Expect = 6e-05
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggacat 39
|||| |||||||| ||||||| |||| ||||||||||||
Sbjct: 97 accgaacgagacatttcataggacaatgaatctggacat 59
>RF00906;MIR1122;AAAA02001787.1/17032-16917 39946:Oryza sativa
Indica Group
Length = 116
Score = 44.1 bits (22), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
|||| |||||||| ||||||| ||||||||||| ||||
Sbjct: 38 accgaacgagacatttcataggacaacgaatctagaca 75
>RF00906;MIR1122;AAAA02005541.1/45284-45440 39946:Oryza sativa
Indica Group
Length = 157
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 15 ttcatagtacaacgaatctgga 36
||||||||||||||||||||||
Sbjct: 52 ttcatagtacaacgaatctgga 73
>RF00906;MIR1122;AACV01013085.1/19238-19395 39947:Oryza sativa
Japonica Group
Length = 158
Score = 44.1 bits (22), Expect = 2e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaa 30
||||||||| ||| ||||||||||||||||
Sbjct: 37 accggacgaaacatttcatagtacaacgaa 66
>RF00906;MIR1122;AACV01005493.1/30553-30709 39947:Oryza sativa
Japonica Group
Length = 157
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctgg 35
|||| |||||||||||||||||||||
Sbjct: 47 gacatttcatagtacaacgaatctgg 72
>RF00906;MIR1122;AAAA02030479.1/4787-4952 39946:Oryza sativa Indica
Group
Length = 166
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 ttcatagtacaacgaatctgga 36
||||||||||||||||||||||
Sbjct: 116 ttcatagtacaacgaatctgga 95
>RF00906;MIR1122;AACV01022113.1/70289-70455 39947:Oryza sativa
Japonica Group
Length = 167
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 15 ttcatagtacaacgaatctgga 36
||||||||||||||||||||||
Sbjct: 117 ttcatagtacaacgaatctgga 96
>RF00906;MIR1122;AACV01025355.1/1742-1876 39947:Oryza sativa
Japonica Group
Length = 135
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 tagtacaacgaatctggacatgaaga 44
|||||||||||||||||||| |||||
Sbjct: 56 tagtacaacgaatctggacaggaaga 81
>RF00906;MIR1122;AAAA02014858.1/50124-50003 39946:Oryza sativa
Indica Group
Length = 122
Score = 44.1 bits (22), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
|||||| | |||| ||||||||||||||||| ||||||
Sbjct: 85 accggatgtgacatttcatagtacaacgaatatggaca 48
>RF00906;MIR1122;AP008218.1/11313857-11314012 39947:Oryza sativa
Japonica Group
Length = 156
Score = 44.1 bits (22), Expect = 2e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 ttcatagtacaacgaatctggacatg 40
|||||||||||| |||||||||||||
Sbjct: 52 ttcatagtacaatgaatctggacatg 77
>RF00906;MIR1122;AC137593.2/94685-94531 39947:Oryza sativa Japonica
Group
Length = 155
Score = 44.1 bits (22), Expect = 2e-04
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
|||||| ||||||| || || |||||||||||||||||
Sbjct: 118 accggatgagacacatcctaatacaacgaatctggaca 81
>RF00906;MIR1122;AP004680.3/59671-59809 39947:Oryza sativa
Japonica Group
Length = 139
Score = 44.1 bits (22), Expect = 2e-04
Identities = 35/38 (92%), Gaps = 1/38 (2%)
Strand = Plus / Plus
Query: 1 accggacgagacacttcatagtacaacgaatctggaca 38
||||||||||||| ||||||||| || |||||||||||
Sbjct: 38 accggacgagacatttcatagta-aatgaatctggaca 74
>RF00906;MIR1122;AC138001.2/59407-59266 39947:Oryza sativa
Japonica Group
Length = 142
Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tagtacaacgaatctggacatg 40
||||||||||||||||||||||
Sbjct: 61 tagtacaacgaatctggacatg 82
>RF00906;MIR1122;AAAA02008343.1/9662-9526 39946:Oryza sativa
Indica Group
Length = 137
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tagtacaacgaatctggacat 39
|||||||||||||||||||||
Sbjct: 57 tagtacaacgaatctggacat 77
>RF00906;MIR1122;AAAA02014808.1/30258-30413 39946:Oryza sativa
Indica Group
Length = 156
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggaca 38
|||| ||||||||||||||||||| ||||
Sbjct: 110 gacatttcatagtacaacgaatctagaca 82
>RF00906;MIR1122;AAAA02022617.1/34247-34092 39946:Oryza sativa
Indica Group
Length = 156
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 18 atagtacaacgaatctggaca 38
|||||||||||||||||||||
Sbjct: 102 atagtacaacgaatctggaca 82
>RF00906;MIR1122;AC145810.3/47756-47629 39947:Oryza sativa
Japonica Group
Length = 128
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 atagtacaacgaatctggaca 38
|||||||||||||||||||||
Sbjct: 50 atagtacaacgaatctggaca 70
>RF00906;MIR1122;AC092779.5/114881-115036 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggaca 38
||||| || ||||||||||||||||||||
Sbjct: 47 gacacatcctagtacaacgaatctggaca 75
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggaca 38
||||| || ||||||||||||||||||||
Sbjct: 110 gacacatcctagtacaacgaatctggaca 82
>RF00906;MIR1122;AAAA02007473.1/30171-30327 39946:Oryza sativa
Indica Group
Length = 157
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 9 agacacttcatagtacaacgaatctggacatga 41
||||| |||||||||||| |||||| |||||||
Sbjct: 112 agacatttcatagtacaatgaatctagacatga 80
>RF00906;MIR1122;AP008208.1/15568785-15568653 39947:Oryza sativa
Japonica Group
Length = 133
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggaca 38
|||| ||| ||||||||||||||||||||
Sbjct: 87 gacatttcctagtacaacgaatctggaca 59
>RF00906;MIR1122;AAAA02032049.1/7937-7781 39946:Oryza sativa Indica
Group
Length = 157
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 19 tagtacaacgaatctggacat 39
|||||||||||||||||||||
Sbjct: 102 tagtacaacgaatctggacat 82
>RF00906;MIR1122;AAAA02028930.1/6053-6188 39946:Oryza sativa
Indica Group
Length = 136
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggaca 38
||||| || ||||||||||||||||||||
Sbjct: 90 gacacatcctagtacaacgaatctggaca 62
>RF00906;MIR1122;AAAA02017627.1/6518-6673 39946:Oryza sativa
Indica Group
Length = 156
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggaca 38
|||| ||||||||||| ||||||||||||
Sbjct: 47 gacatttcatagtacaccgaatctggaca 75
>RF00906;MIR1122;AP003684.3/140140-140272 39947:Oryza sativa
Japonica Group
Length = 133
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggaca 38
|||| ||||||||||||||||||| ||||
Sbjct: 47 gacatttcatagtacaacgaatctagaca 75
>RF00906;MIR1122;AP008214.1/337131-337286 39947:Oryza sativa
Japonica Group
Length = 156
Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 42 agattcgttgtactataaagtgtctcgtctggt 74
||||||||||||||||||| |||| | ||||||
Sbjct: 70 agattcgttgtactataaaatgtcccatctggt 38
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 atagtacaacgaatctggaca 38
|||||||||||||||||||||
Sbjct: 55 atagtacaacgaatctggaca 75
>RF00906;MIR1122;AAAA02004945.1/9210-9077 39946:Oryza sativa
Indica Group
Length = 134
Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 atagtacaacgaatctggaca 38
|||||||||||||||||||||
Sbjct: 55 atagtacaacgaatctggaca 75
>RF00906;MIR1122;AK101131.1/45-161 39947:Oryza sativa Japonica
Group
Length = 117
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 10 gacacttcatagtacaacgaatctggaca 38
||||| || ||||||||||||||||||||
Sbjct: 71 gacacatcctagtacaacgaatctggaca 43
>RF00906;MIR1122;AAAA02000357.1/59924-60057 39946:Oryza sativa
Indica Group
Length = 134
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 11 acacttcatagtacaacgaatctggacat 39
||||||| |||||||||||||| ||||||
Sbjct: 87 acacttcctagtacaacgaatccggacat 59
>RF00906;MIR1122;AP008217.1/23244951-23245072 39947:Oryza sativa
Japonica Group
Length = 122
Score = 42.1 bits (21), Expect = 0.001
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 10 gacacttcatagtacaacgaatctggaca 38
||||| || ||||||||||||||||||||
Sbjct: 47 gacacatcctagtacaacgaatctggaca 75
