miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49063_osa-miR815b:pmrd
Length = 130
Score = 258 bits (130), Expect = 9e-70
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 1 ctaatggttcacctcgttttgcgtatattcccaatcttctctatttccttctcctcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctaatggttcacctcgttttgcgtatattcccaatcttctctatttccttctcctcaaac 60
Query: 61 acagcctgggagtgtttgagaaggggattgaggagattgggaagatacgtaaaacgaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acagcctgggagtgtttgagaaggggattgaggagattgggaagatacgtaaaacgaggt 120
Query: 121 gagccattag 130
||||||||||
Sbjct: 121 gagccattag 130
Score = 58.0 bits (29), Expect = 2e-09
Identities = 108/133 (81%), Gaps = 6/133 (4%)
Strand = Plus / Minus
Query: 1 ctaatggttcacctcgttttgcgtatattcccaatcttctctatttccttctcctcaaac 60
||||||| |||||||||||| ||||| |||||||||| ||| || ||||||| ||||
Sbjct: 130 ctaatggctcacctcgttttacgtatcttcccaatctcctcaatccccttctc---aaac 74
Query: 61 acagcctgggagtgtttgag---aaggggattgaggagattgggaagatacgtaaaacga 117
|| || || ||||||||| |||| || ||| |||||||||| ||||| |||||||
Sbjct: 73 actcccaggctgtgtttgaggagaaggaaatagagaagattgggaatatacgcaaaacga 14
Query: 118 ggtgagccattag 130
||||| |||||||
Sbjct: 13 ggtgaaccattag 1
>49064_osa-miR815c:pmrd
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 gagaaggggattgaggagattgggaag 104
|||||||||||||||||||||||||||
Sbjct: 77 gagaaggggattgaggagattgggaag 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 28 ttcccaatcttctctatttccttctcctcaaacaca 63
|||||||||| ||| || |||||||||||||||||
Sbjct: 102 ttcccaatctcctcaatccccttctcctcaaacaca 67
>49062_osa-miR815a:pmrd
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 gagaaggggattgaggagattggg 101
||||||||||||||||||||||||
Sbjct: 56 gagaaggggattgaggagattggg 79
