miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>49064_osa-miR815c:pmrd
Length = 103
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 cttctcctctcttctctcctccacctcagcatttagccggcttatagcctatacttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttctcctctcttctctcctccacctcagcatttagccggcttatagcctatacttcctc 60
Query: 61 taagggtgtgtttgaggagaaggggattgaggagattgggaag 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagggtgtgtttgaggagaaggggattgaggagattgggaag 103
>49062_osa-miR815a:pmrd
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 58 ctctaagggtgtgtttgaggagaaggggattgaggagattggg 100
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ctcttagggtgtgtttgaggagaaggggattgaggagattggg 79
>49063_osa-miR815b:pmrd
Length = 130
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 77 gagaaggggattgaggagattgggaag 103
|||||||||||||||||||||||||||
Sbjct: 78 gagaaggggattgaggagattgggaag 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 67 tgtgtttgaggagaaggggattgaggagattgggaa 102
||||||||||||||||| || ||| ||||||||||
Sbjct: 63 tgtgtttgaggagaaggaaatagagaagattgggaa 28
